hsc70 (LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696)


Basic Information

Item Value
gene id hsc70
gene name LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18800355 ~ 18805299 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805438.1
CTCTTAGTCCGCTGGCCAGGAGAGGGAAAGGAGTACTGGAGAGTGTTGTGCCGCTCTAACTCAGTAAACCCAAGTCGAACATCTGACAGCGCAAGATGTCTAAAGGACCAGCAGTAGGCATTGATCTGGGCACCACGTATTCCTGTGTGGGCATCTTCCAGCATGGCAAAGTGGAAATCATTGCCAATGACCAAGGAAACAGGACCACACCCAGCTATGTGGCCTTCACAGACACTGAGCGACTGATTGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCATCCAACACTGTATTTGATGCTAAGCGTCTGATAGGCCGTAAGTTTGACGATGCTGTGGTGCAGTCAGATATGAAGCACTGGCCCTTCAAGGTCGTTAATGACTCATCCAAACCTAAGATGGAGGTTGAATACAAAGGTGAGAGCAAAACCTTCTACCCAGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAAGGAGATCTCTGAGGCTTATCTCGGCAAGCCTGTGAACAATGCAGTTATCACAGTACCTGCTTACTTCAACGACTCCCAGCGTCAAGCCACCAAAGATGCTGGAACCATCGCTGGCCTTAATGTGCTACGCATCATCAATGAGCCCACTGCTGCAGCCATTGCTTATGGCCTGGACAAAAAGGTTGGCGGTGAACGTAATGTCCTTATCTTTGACCTTGGAGGTGGTACTTTCGATGTGTCGATCCTGACTATTGAGGATGGCATCTTCGAGGTCAAGTCCACTGCCGGTGACACTCACTTGGGCGGTGAGGACTTTGACAACCGCATGGTTACCCACTTTGTCGCTGAGTTCAAGCGCAAGTTCAAAAAGGAAATCATCAACAACAAGCGAGCTGTGCGTCGTCTGCGCACAGCGTGCGAGCGTGCCAAGCGCACCCTCTCCAGCAGCACCCAGGCCAGCATTGAGATCGATTCCCTCTACGAAGGAGTCGATTTCTACACTTCCATCACCAGGGCCCGGTTTGAAGAGCTCAATGCAGACCTGTTCCGTGGAACCCTCGAGCCTGTGGAGAAGGCCTTGAGGGATGCCAAGATGGACAAGGCCCAGATCCATGACATTGTCCTGGTGGGAGGCTCCACACGTATCCCCAAGATTCAAAAGTTGCTGCAGGACTTGTTCAATGGCCGTGACCTCAATAAGAGCATCAACCCTGATGAGGCTGTGGCTTATGGTGCAGCTGTGCAGGCAGCCATCTTGGCTGGTGATAAGTCTGAGAATGTACAGGACCTGCTCCTGCTGGATGTTACACCCCTGTCCCTGGGAATTGAGACCGCTGGAGGAGTAATGACTGTCCTTATCAAAAGGAACACCACCATCCCGACCAAGCAAACACAGACCTTTACCACTTATTCAGACAACCAACCGGGTGTGCTTATTCAGGTTTATGAAGGTGAGAGAGCCATGACCAAGGATAATAATATCCTGGGCAAGTTTGAACTGACTGGTCTTCCACCTGCTCCCAGAGGTGTCCCTCAGATTGAGGTGACCTTTGACATCGATGCCAACGGCATTCTTAATGTGTCTGCAGTGGACAAAAGCACTGGAAAGGAGAACAAGATCACCATCACCAATGATAAAGGGCGGTTGAGCAAGGAGGACATTGAGCAAATGGTGCAGGAGGCAGAGCAGTTTAAGGCGGAAGACGAGGCCCAGAGAGAGAAGGTCACAGCCAAAAACTCCCTTGAGTCTCTGGCCTTCAACATGAAGAGCACTGTGGAGGACGAGAAGCTCCAAGACAAGATCAGCCCTGAGGACAAAAAGACCATTGTAGACAAGTGCAATGAAGTTATTGCTTGGCTGGACAAGAACCAGACGGCAGAGAAGGATGAGTATGATCACCAGCAGAAGGAACTAGAGAAGGTGTGCAACCCAATCATCACCCAGCTATATCAGGGGGGTATGCCAGGAGGGATGCCTGGAGGAATGCCAGGTGGCTTCCCTGGTGgagctggaggcagctcctcctCTGGCCCAACTATCGAGGAGGTCGACTGAACACTATACTGAAAGTTTCTTTTTCTCAGATCCCAACACAGACTTACTGCCTTTAAGCTGTTTACTAAGCCAGAATACACATCCAATAAAGATTTGATCACAGGCTCATTTTGATTTACATTCTTGCTATATTTGTTCAAAACTTTAAGATTTCAATATTTAACTTCTAATCTAAGTAACAAAAACTGACACTTGCACATGGTTAAAATAGTCAGATGAGCCATAATCAGAGTCTGTTTGTCGTCTTCATTATTTCTCTCTCCAGTGATGATTTGCATGAAGGTTTGtgaacattaaataaataaagatcaCAAATGGGATCCTGATTTA

Function

NR:

description
heat shock cognate 71 kDa protein-like

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
K03283 HSPA1s; heat shock 70kDa protein 1/2/6/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805438.1 True 2363 mRNA 0.49 9 18800355 18805299

Neighbor

gene id symbol gene type direction distance location
si:dkey-238d18.4 LOC104961375,LOC103359602 coding upstream 904 18790625 ~ 18799451 (+)
LOC120562035 NA coding upstream 26533 18749085 ~ 18773822 (+)
LOC120562799 NA coding upstream 56555 18725052 ~ 18743800 (+)
LOC120562045 NA coding upstream 63770 18731402 ~ 18736585 (+)
LOC120561938 NA coding upstream 87387 18700302 ~ 18712968 (+)
LOC120562797 ctrl coding downstream 703 18806002 ~ 18808414 (+)
LOC120562037 NA coding downstream 4057 18809356 ~ 18812372 (+)
zmp:0000001114 NA coding downstream 128931 18934230 ~ 18956037 (+)
nphs1 nphs1 coding downstream 215855 19021154 ~ 19089959 (+)
fxyd5 NA coding downstream 290169 19095468 ~ 19101074 (+)
G73377 NA non-coding upstream 49556 18750345 ~ 18750799 (+)
G73361 NA non-coding upstream 107385 18687042 ~ 18692970 (+)
G73338 NA non-coding upstream 235273 18501151 ~ 18565082 (+)
LOC120562823 NA non-coding upstream 305011 18490124 ~ 18495344 (+)
G73330 NA non-coding upstream 351926 18440987 ~ 18448429 (+)
G73484 NA non-coding downstream 8010 18813309 ~ 18815597 (+)
G73493 NA non-coding downstream 67075 18872374 ~ 18873957 (+)
G73499 aplp1 non-coding downstream 103204 18908503 ~ 18911216 (+)
G73501 aplp1 non-coding downstream 106095 18911394 ~ 18932173 (+)
G73568 NA non-coding downstream 319857 19125156 ~ 19125848 (+)
LOC120562824 NA other upstream 53680 18744662 ~ 18746675 (+)
LOC120562819 NA other upstream 144624 18652386 ~ 18655731 (+)
LOC120562796 NA other upstream 163048 18632402 ~ 18637307 (+)
LOC120562806 NA other upstream 330277 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 339029 18455574 ~ 18461326 (+)
proser3 NA other downstream 13902 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 27946 18833245 ~ 18861958 (+)
G73570 LOC103371659 other downstream 343314 19148613 ~ 19158995 (+)
hcst LOC104925504,LOC104961397 other downstream 384721 19190020 ~ 19192102 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 641868 19447167 ~ 19453283 (+)

Expression


Co-expression Network