LOC120562035


Basic Information

Item Value
gene id LOC120562035
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18749085 ~ 18773822 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805454.1
taacatttatagTTTCAGATAAAAATCAATTTGAGCAATTATCACACATGCAACACCTCATCACGTTGCTGTAGGCTGAATGAGCAAAGGAAATCCTGTGTTAACATCTCTGCATCTGTGAAACACATGGTGTGAAGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCCTCAGTAAAAGGTCTCCCTGGATCCTGTGTGGTGATCCCCTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGCAGTATCGGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATATGCCCCAGTAAATGTGACGGTTGAGCACAAGTCAGATGTAAAGGAGGGAGAAGCTGTGCGGCTGAGATGCTCCAGTGATGCTAACCCCCCTGCCAGCAGCTATCAGTGGCATAATGAAACTGGTGCTCAGCTGCATCAAGGAAACGTCTACATGCTGCCAAATGTCTCCAGACACACAGGAGCTCTGTACTGTACTGCCATCAATGCAGTAGGACAAGGCAATTCAACCCCTGTGCAGCTTAATGTGTTATATGCCCCTGAGATTAAGACGGCTTCTTCCTGCTCCTCAGAGGCAGATATggtaaagtgtgtgtgcattgcGGAGTCCAAGCCTCCCAGCATGGTCTATTTTGTGCTTTCTGACAGAGTCCTGCCAAGCACCAAGGTAGAGAAACATGGCTTTGTTACCATTGGAACTCTGCGGGCAAAGTTTGGATCTTCTGAGGCTGTCTACTGTCTGGCAAACAACACCCTGGGTAATGCCAACCTCACACTCCCTTTACCTAACAGTAAGATGCAGAATCTTTATATTATCATCGCTTCTGGAGCAGGAGGGATTTTGGTGATGCTTTTAATAACAGTGATAGTTGTTAAAAAACGCAGGGGGAGGTCTAAGGATGCACCAACACCTCGCATGAACTCACTGAAAACAGATAAAGATGTGGTGCTCCCTCAGTATGCTCCAACAAAAAGAATAGAAAGGTGCTATGATGAGGTACAGTGCTCTGGCATTTACGTCGATGATCATGTGTATGGCAACATGGAGACTGACTGCGATGAAACAATATATGCCAACATGTAACATTGTTGAACTCATTTGAGGAACCGCTCCATCTGATGTGGGTCAAGAAAGTTGTACAAAAAATATGCTTTCTTCTGTATATAAGTGCTGTTTTTCCCCTGTAATTCCCacatatttttgaaaataattccCTGACTGCTTGTCCGATCAACAGTAACAAATGTGAATGATGAAAAATCACCATTAAACTGCTGTCATTTTTTAGTTACATATATGTTTGATAACTTTTAATTTTCCATCAAATCAATGTATCAGTCACCTAAGACAATACATCTTGCACAAGTCACACCTTTTGAATGTCCTCTTCAGCTGTATCTGTAtttgaatgtactgtataaacACATGCATTTTCACAGattgtattcatttattaatcaaataaaacaaactgatAAAGTAAA
>XM_039805455.1
AGGGAAATGACAGCGGCTCCTGACAAGTCTGAAAATATTTGTCACTTTATTTGCAGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCCTCAGTAAAAGGTCTCCCTGGATCCTGTGTGGTGATCCCCTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGCAGTATCGGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATATGCCCCAGTAAATGTGACGGTTGAGCACAAGTCAGATGTAAAGGAGGGAGAAGCTGTGCGGCTGAGATGCTCCAGTGATGCTAACCCCCCTGCCAGCAGCTATCAGTGGCATAATGAAACTGGTGCTCAGCTGCATCAAGGAAACGTCTACATGCTGCCAAATGTCTCCAGACACACAGGAGCTCTGTACTGTACTGCCATCAATGCAGTAGGACAAGGCAATTCAACCCCTGTGCAGCTTAATGTGTTATATGCCCCTGAGATTAAGACGGCTTCTTCCTGCTCCTCAGAGGCAGATATggtaaagtgtgtgtgcattgcGGAGTCCAAGCCTCCCAGCATGGTCTATTTTGTGCTTTCTGACAGAGTCCTGCCAAGCACCAAGGTAGAGAAACATGGCTTTGTTACCATTGGAACTCTGCGGGCAAAGTTTGGATCTTCTGAGGCTGTCTACTGTCTGGCAAACAACACCCTGGGTAATGCCAACCTCACACTCCCTTTACCTAACAGTAAGATGCAGAATCTTTATATTATCATCGCTTCTGGAGCAGGAGGGATTTTGGTGATGCTTTTAATAACAGTGATAGTTGTTAAAAAACGCAGGGGGAGGTCTAAGGATGCACCAACACCTCGCATGAACTCACTGAAAACAGATAAAGATGTGGTGCTCCCTCAGTATGCTCCAACAAAAAGAATAGAAAGGTGCTATGATGAGGTACAGTGCTCTGGCATTTACGTCGATGATCATGTGTATGGCAACATGGAGACTGACTGCGATGAAACAATATATGCCAACATGTAACATTGTTGAACTCATTTGAGGAACCGCTCCATCTGATGTGGGTCAAGAAAGTTGTACAAAAAATATGCTTTCTTCTGTATATAAGTGCTGTTTTTCCCCTGTAATTCCCacatatttttgaaaataattccCTGACTGCTTGTCCGATCAACAGTAACAAATGTGAATGATGAAAAATCACCATTAAACTGCTGTCATTTTTTAGTTACATATATGTTTGATAACTTTTAATTTTCCATCAAATCAATGTATCAGTCACCTAAGACAATACATCTTGCACAAGTCACACCTTTTGAATGTCCTCTTCAGCTGTATCTGTAtttgaatgtactgtataaacACATGCATTTTCACAGattgtattcatttattaatcaaataaaacaaactgatAAAGTAAA
>XM_039805456.1
CAAAGTAAAACTGTCTCTGTTCCCAGTGTCACTGAGTAGAACTACTTGCTGTGCAGTTGTTGATGTTATTGAGGTAATATTAAGCCTACTGCATCTTGCCAGTGTGGTCACTGCAGTTGTTGTTTACTGTAAGCTGTCTCAACACAGTAGGCTAAGACAGAGCCTGTCTGAGCTACTTGGAATTTCACAATTTTGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCCTCAGTAAAAGGTCTCCCTGGATCCTGTGTGGTGATCCCCTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGCAGTATCGGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATATGCCCCAGTAAATGTGACGGTTGAGCACAAGTCAGATGTAAAGGAGGGAGAAGCTGTGCGGCTGAGATGCTCCAGTGATGCTAACCCCCCTGCCAGCAGCTATCAGTGGCATAATGAAACTGGTGCTCAGCTGCATCAAGGAAACGTCTACATGCTGCCAAATGTCTCCAGACACACAGGAGCTCTGTACTGTACTGCCATCAATGCAGTAGGACAAGGCAATTCAACCCCTGTGCAGCTTAATGTGTTATATGCCCCTGAGATTAAGACGGCTTCTTCCTGCTCCTCAGAGGCAGATATggtaaagtgtgtgtgcattgcGGAGTCCAAGCCTCCCAGCATGGTCTATTTTGTGCTTTCTGACAGAGTCCTGCCAAGCACCAAGGTAGAGAAACATGGCTTTGTTACCATTGGAACTCTGCGGGCAAAGTTTGGATCTTCTGAGGCTGTCTACTGTCTGGCAAACAACACCCTGGGTAATGCCAACCTCACACTCCCTTTACCTAACAGTAAGATGCAGAATCTTTATATTATCATCGCTTCTGGAGCAGGAGGGATTTTGGTGATGCTTTTAATAACAGTGATAGTTGTTAAAAAACGCAGGGGGAGGTCTAAGGATGCACCAACACCTCGCATGAACTCACTGAAAACAGATAAAGATGTGGTGCTCCCTCAGTATGCTCCAACAAAAAGAATAGAAAGGTGCTATGATGAGGTACAGTGCTCTGGCATTTACGTCGATGATCATGTGTATGGCAACATGGAGACTGACTGCGATGAAACAATATATGCCAACATGTAACATTGTTGAACTCATTTGAGGAACCGCTCCATCTGATGTGGGTCAAGAAAGTTGTACAAAAAATATGCTTTCTTCTGTATATAAGTGCTGTTTTTCCCCTGTAATTCCCacatatttttgaaaataattccCTGACTGCTTGTCCGATCAACAGTAACAAATGTGAATGATGAAAAATCACCATTAAACTGCTGTCATTTTTTAGTTACATATATGTTTGATAACTTTTAATTTTCCATCAAATCAATGTATCAGTCACCTAAGACAATACATCTTGCACAAGTCACACCTTTTGAATGTCCTCTTCAGCTGTATCTGTAtttgaatgtactgtataaacACATGCATTTTCACAGattgtattcatttattaatcaaataaaacaaactgatAAAGTAAA
>XM_039805457.1
taacatttatagTTTCAGATAAAAATCAATTTGAGCAATTATCACACATGCAACACCTCATCACGTTGCTGTAGGCTGAATGAGCAAAGGAAATCCTGTGTTAACATCTCTGCATCTGTGAAACACATGGTGTGAAGGTCTGACCCCGAGAGGACGACATGGACTTTCTCAAGTGGCCTCTGTTTTTTGTGTGCCTTTGCTCTAAGGGTTCTGAAACTGAAGGCTCATCTTGGACAATTAAGGTGCCGTCCTCAGTAAAAGGTCTCCCTGGATCCTGTGTGGTGATCCCCTGCTCGTTCAACTACCCAGATCCAGGCAGGGTGGTCACTGAATTCACTGGGATGTGGGCCGAGGGGGAACATGAGCTCATCTATCACCCAGACAAGTTAACAGTGAAGCAGCAGTATCGGAGTCGGACAGAGCTGCTGGGAGACATCAGTCTGAAGAACTGTTCATTTAAGATTGATCCCCTTCGACAAAGTGACCAAGGGCCGTTTTATTTCAGGATCGAAATGGCAGGCTATGAAAAGTTTTCTTACAAAGAGAACAGAGTCTCCATTACAATGAGTGTACCAAATCCCATCCAGTTCTCTGTGAAAGAGGAGGTAGTGGAAGGTGATAAGGTGTCTGCATCCTGCTCAGTGTCTCACTCCTGCCCCACCTCTCCTCCTGTCTTCACCTGGAGTCAcaaaggacacacacatgtCCAACCACAGCAGCTTGACGATGGCCAGTGGAGAGCGACATCTACCATAAACTTTCAAGCTACCAGCGCTGATCACAACAAGCCTTTAAAGTGTACTGTAACATACCATGGAGGGCAGCACCAAACAACATCCAGAGACCTCAAAGTAAAATATGCCCCAGTAAATGTGACGGTTGAGCACAAGTCAGATGTAAAGGAGGGAGAAGCTGTGCGGCTGAGATGCTCCAGTGATGCTAACCCCCCTGCCAGCAGCTATCAGTGGCATAATGAAACTGGTGCTCAGCTGCATCAAGGAAACGTCTACATGCTGCCAAATGTCTCCAGACACACAGGAGCTCTGTACTGTACTGCCATCAATGCAGTAGGACAAGGCAATTCAACCCCTGTGCAGCTTAATGTGTTATATGCCCCTGAGATTAAGACGGCTTCTTCCTGCTCCTCAGAGGCAGATATggtaaagtgtgtgtgcattgcGGAGTCCAAGCCTCCCAGCATGGTCTATTTTGTGCTTTCTGACAGAGTCCTGCCAAGCACCAAGGTAGAGAAACATGGCTTTGTTACCATTGGAACTCTGCGGGCAAAGTTTGGATCTTCTGAGGCTGTCTACTGTCTGGCAAACAACACCCTGGGTAATGCCAACCTCACACTCCCTTTACCTAACAGTAAGATGCAGAATCTTTATATTATCATCGCTTCTGGAGCAGGAGGGATTTTGGTGATGCTTTTAATAACAGTGATAGTTGTTAAAAAACGGGGGAGGTCTAAGGATGCACCAACACCTCGCATGAACTCACTGAAAACAGATAAAGATGTGGTGCTCCCTCAGTATGCTCCAACAAAAAGAATAGAAAGGTGCTATGATGAGGTACAGTGCTCTGGCATTTACGTCGATGATCATGTGTATGGCAACATGGAGACTGACTGCGATGAAACAATATATGCCAACATGTAACATTGTTGAACTCATTTGAGGAACCGCTCCATCTGATGTGGGTCAAGAAAGTTGTACAAAAAATATGCTTTCTTCTGTATATAAGTGCTGTTTTTCCCCTGTAATTCCCacatatttttgaaaataattccCTGACTGCTTGTCCGATCAACAGTAACAAATGTGAATGATGAAAAATCACCATTAAACTGCTGTCATTTTTTAGTTACATATATGTTTGATAACTTTTAATTTTCCATCAAATCAATGTATCAGTCACCTAAGACAATACATCTTGCACAAGTCACACCTTTTGAATGTCCTCTTCAGCTGTATCTGTAtttgaatgtactgtataaacACATGCATTTTCACAGattgtattcatttattaatcaaataaaacaaactgatAAAGTAAA

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805454.1 False 2062 mRNA 0.44 10 18764760 18773822
XM_039805455.1 False 1981 mRNA 0.44 9 18768336 18773822
XM_039805456.1 True 2120 mRNA 0.44 10 18749085 18773822
XM_039805457.1 False 2059 mRNA 0.44 10 18764760 18773822

Neighbor

gene id symbol gene type direction distance location
LOC120562799 NA coding upstream 5285 18725052 ~ 18743800 (+)
LOC120562045 NA coding upstream 12500 18731402 ~ 18736585 (+)
LOC120561938 NA coding upstream 36117 18700302 ~ 18712968 (+)
LOC120562049 NA coding upstream 107756 18638209 ~ 18641329 (+)
LOC120562811 NA coding upstream 200888 18545673 ~ 18548197 (+)
si:dkey-238d18.4 LOC104961375,LOC103359602 coding downstream 16803 18790625 ~ 18799451 (+)
hsc70 LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696 coding downstream 26533 18800355 ~ 18805299 (+)
LOC120562797 ctrl coding downstream 32180 18806002 ~ 18808414 (+)
LOC120562037 NA coding downstream 35534 18809356 ~ 18812372 (+)
zmp:0000001114 NA coding downstream 160408 18934230 ~ 18956037 (+)
G73361 NA non-coding upstream 56115 18687042 ~ 18692970 (+)
G73338 NA non-coding upstream 184003 18501151 ~ 18565082 (+)
LOC120562823 NA non-coding upstream 253741 18490124 ~ 18495344 (+)
G73330 NA non-coding upstream 300656 18440987 ~ 18448429 (+)
G73326 NA non-coding upstream 324682 18423989 ~ 18424403 (+)
G73484 NA non-coding downstream 39487 18813309 ~ 18815597 (+)
G73493 NA non-coding downstream 98552 18872374 ~ 18873957 (+)
G73499 aplp1 non-coding downstream 134681 18908503 ~ 18911216 (+)
G73501 aplp1 non-coding downstream 137572 18911394 ~ 18932173 (+)
G73568 NA non-coding downstream 351334 19125156 ~ 19125848 (+)
LOC120562824 NA other upstream 2410 18744662 ~ 18746675 (+)
LOC120562819 NA other upstream 93354 18652386 ~ 18655731 (+)
LOC120562796 NA other upstream 111778 18632402 ~ 18637307 (+)
LOC120562806 NA other upstream 279007 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 287759 18455574 ~ 18461326 (+)
proser3 NA other downstream 45379 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 59423 18833245 ~ 18861958 (+)
G73570 LOC103371659 other downstream 374791 19148613 ~ 19158995 (+)
hcst LOC104925504,LOC104961397 other downstream 416198 19190020 ~ 19192102 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 673345 19447167 ~ 19453283 (+)

Expression


Co-expression Network