si:dkey-238d18.4 (LOC104961375,LOC103359602)


Basic Information

Item Value
gene id si:dkey-238d18.4
gene name LOC104961375,LOC103359602
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18790625 ~ 18799451 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805458.1
CCAAACTCGGATCTCAAGGTGTAGTCATGTGACTCCCAGATGGCCGAATGAGattcaaccatagactgtatattgaTTCAACAGAGCTGGGAAAGGTTCGCTGAAACTCATTCAACACGTTTTGTGATCTCGGAACGAGTCGACTCCTTCCGGCGGCAGAAGTCAGTCCCTGGCTGGTTTCAGTTCCAGATGGGTTTCGCTGTTTAGGGAGCAGTAGCAGTTAGTCTGCAGGATGACAGTTTGGTGTCTGTTGACAAGCTCTTCTTCACCTGTGCGTGGTGTGATCGCAAATACCGTCAATTCTGCATACACAGATGGAGGATCTGAGACAGACAGCCGGAGAGGAGACGAGCTCACCGGATAGTCCCCGGTCAGATGTCCGCTTCCAGAAGAGAGTAGCAGCGGTCAGCTGTCCTGCTCTGTCCGCCGCACGCCTCACCTTACCTGGAGTCATGGACGCCGAGGGGAGGGTCGACGAGTCAAGACTGAGAATGCATATTTTCAAAAACGGTGGCGTTTGTCCCTCTGAGCGTGGCCTGGTGTGGCGGTTCCTGTTTGGGATGTACCCATGCAGCTCAACAGCTTTAGAGCGCTCTCTGCTGCAGGAGCAGATGGCTGTGCGTTACCGGCTCATGAAGAGAAAGTGGCAGCAGTTCCTTCCTTCGGCAGTGCAGATGCACCTTAACGGCACAGATGCTGAGTTGGTGGCGGCAGTCAGGTACTTTGAGCAGAGGCAGACACAGGTCCATCAACAGACCCAGGACCAGTCGGAGGGGGTCAGCGACAGACTGGCTTTCTTGGAGCTTCAGGCACAGATATTGTTTGAGCGGGTCACGTTTGACCAAGAGGAGCTGCGGGAAGCCACGCGTATCATTGACAAGGATGTGCCAAGAACCAACAGAGAACTGAGCTATTATCAGGGTGAAGGTTCAGGCAATCTGTTGGTGTTAAGAGACATCCTCATCACTTATGCTGCTTTTCATCCAGAGGTCAGTTATGCCCAAGGAATGAACGACCTGTGCAGCCGGTTCCTGGAGGTTCTCGACTCTGAAGTTGACACTTTCTGGAGCTTCTCCTGCTACATGGAGAAATTCTCCAAGGACTTCAGGGCTGACGGTCTGCACAGGAAAATAGAGTTGGAGGCAGCCCTCTTGAAGGAACTGGACCCTCAGCTTTATTCTCATTTGGTCACAGACAGCATGGAGAGCTTCACCTTCTGCCACAGGTGGCTATTGCTGGGTTTCCAGAGGGAGTTTGAACACAGTGACGCATTACGTTTGTTCGAGATCCTGAGCTGTGACCACCTGGAGCTTATCTCCCAGCAAGTAGACAGAGCCCGTTATCAGGAAAGGCTGGCACGAAAATGCAGACCAGAAGACAATTCAAATTTAGAGCTGCCGGCCATTAACACTGACTTCACCTTTGAGCTCTTCATCTGTGCAGCCATCCTTTTAGAGAACAGAGAGTCTCTGCTGCTGTGCCGAGATGATGTACAACTCATCCAGTTTACTAGCAGTCTTCAGGGAACACTGGACCTGAACAGCACACTGAAGAAAGCAGAGCACCATTTGTACAACTACTGCAAGCGCTGCGCTTGGGACTACATGAATGGGTGCTGCAGAGCAGACGAGGGCAAAGAAGAGGACTTTCTTTATCAACTCCGTAGTTTACTTGTTTTAAAGTGATAGCTACTATTTAAATACCAGACATCAAAGACTGTAATTTGTAACGGGACAAATAATCCCTATTTAGAATTTTGATGTtcttttatcttgttttttttatttttgagggAAACGCACTGAAGGCTGCTTACCTTAAGTTGGATCGGTTACTGCTGTTTAgtataaatgtacagtatttattgTGAGACAGTTGACCAACTGAGTTATTTTTAGTTGCTCTCCTGAACCTCCATGAATAGGAAAAGCTTAAGCTCAATATTCTTATTAGGAGATGTTTTCTGGGTTATGCAATATTCAACTGCTAAAAGCAAGCAACTACTCGGCAGGCGTGTGTGAATACTAAGATCTGGTGTGTCGCAACAGGTGGTGTCTGTAACGAACTGCAGTTATATTTAAAGCCAGATGCCCCATGTGTCAGAGAGGCATATGTAATAAGAATAAACGTCcagttttttttagctctgGCAGAGAGACCATACAGGATGGGTAAAGAAAAGTTACTGTACTGTTTTAAATATTGAATGAAACTCATACACAATACAAATAACCCTAAAAGTTATACCTCAATGAAACTACTGAAGATTGTTTACTATGTTGAGTTGGCAATATCATGGTGTTTTCCTCTTATTTTATATACCTTACATAATAAAGGAAGCTTTTACTCTGATaa

Function

NR:

description
GTPase-activating protein GYP7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805458.1 True 2355 mRNA 0.47 10 18790625 18799451

Neighbor

gene id symbol gene type direction distance location
LOC120562035 NA coding upstream 16803 18749085 ~ 18773822 (+)
LOC120562799 NA coding upstream 46825 18725052 ~ 18743800 (+)
LOC120562045 NA coding upstream 54040 18731402 ~ 18736585 (+)
LOC120561938 NA coding upstream 77657 18700302 ~ 18712968 (+)
LOC120562049 NA coding upstream 149296 18638209 ~ 18641329 (+)
hsc70 LOC103359601,LOC103478507,LOC104932369,LOC106945881,LOC102237422,LOC106517696 coding downstream 904 18800355 ~ 18805299 (+)
LOC120562797 ctrl coding downstream 6551 18806002 ~ 18808414 (+)
LOC120562037 NA coding downstream 9905 18809356 ~ 18812372 (+)
zmp:0000001114 NA coding downstream 134779 18934230 ~ 18956037 (+)
nphs1 nphs1 coding downstream 221703 19021154 ~ 19089959 (+)
G73377 NA non-coding upstream 39826 18750345 ~ 18750799 (+)
G73361 NA non-coding upstream 97655 18687042 ~ 18692970 (+)
G73338 NA non-coding upstream 225543 18501151 ~ 18565082 (+)
LOC120562823 NA non-coding upstream 295281 18490124 ~ 18495344 (+)
G73330 NA non-coding upstream 342196 18440987 ~ 18448429 (+)
G73484 NA non-coding downstream 13858 18813309 ~ 18815597 (+)
G73493 NA non-coding downstream 72923 18872374 ~ 18873957 (+)
G73499 aplp1 non-coding downstream 109052 18908503 ~ 18911216 (+)
G73501 aplp1 non-coding downstream 111943 18911394 ~ 18932173 (+)
G73568 NA non-coding downstream 325705 19125156 ~ 19125848 (+)
LOC120562824 NA other upstream 43950 18744662 ~ 18746675 (+)
LOC120562819 NA other upstream 134894 18652386 ~ 18655731 (+)
LOC120562796 NA other upstream 153318 18632402 ~ 18637307 (+)
LOC120562806 NA other upstream 320547 18466428 ~ 18470078 (+)
LOC120562807 NA other upstream 329299 18455574 ~ 18461326 (+)
proser3 NA other downstream 19750 18819201 ~ 18828688 (+)
kmt2bb kmt2b other downstream 33794 18833245 ~ 18861958 (+)
G73570 LOC103371659 other downstream 349162 19148613 ~ 19158995 (+)
hcst LOC104925504,LOC104961397 other downstream 390569 19190020 ~ 19192102 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other downstream 647716 19447167 ~ 19453283 (+)

Expression


Co-expression Network