LOC120562051 (tmem222)


Basic Information

Item Value
gene id LOC120562051
gene name tmem222
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17486166 ~ 17489474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805492.1
GACTGCGCGCTTCCGCTCCCACGTCGCCTGGCGCCTGTACGTCACTGTCATCTCATGTCACTCCAGGCTGTGATGGCGGAGGTGGACGAAACCGACATAATTATGAACTACCACGGAGATTTCTTAAAAAGCGACAGAAAAAACAGTCGCTACCCGTACTGCATTGTCTGGACACCTATTCCAATTTTATCGTGGGTGTTCCCCTTCATTGGTCACATGGGTATATGCACCTCTGCTGGAATCATACGAGATTTTGCAGGCTCCTACTTTGTCTCGGAAGACAACATGGGCTTTGGTAGACCAACCAAGTATTGGAAGCTTGATGTGGATAAAGTGTGTGGCAATGGTGCTGCTACATGGGACAAAGCAGTGAATGACGCATCTGAGGAATACAAATGCAGGCCGCACAATCTGTGCTTAGATAACTGCCATTCCCACGTCGCCATGGCCCTCAACCTTATGCACTACGACAACAGCACATCTTGGAACATGCTGAAACTCTGTGTGCTGTCTTTTGTTCGTGGGAAACATGTGAGTTTCGCAGCTTTCCTCAAGACCTGGCTGCCGTTTTTCATGCTGTGCGGAGTCCTCGGCACGTTCATCCTAACATTCAACCTACATTAGTGGAGCGAGCAGTCCAACGGGATGACTCACAGACTCATGCTTATGCTTTACACATTGTCATTGGCTGTTGACGTGAATGACGGTGGTGTGTTTTGACGGGACGTTTGTTTGTACAAAGAATTCCACATGAGGGATTTCATTGTATGTTAGTGATCTAGTTTCTAGAAGGGTGTTTATGGGCAAAGCCTAGCTGTTTATGTGTAGTTTTGAAATCAATATTATGTTTTAACGgtaaagatctttttttttccaaaatatttATGATTTAGTAAGGTGAGTAAGCTACGGTGTCTTCAAAATTCACCTTTACTTTTTTTCACACAGTGGGCTCTGTGTTTTGCTCGTATTATAAGAGTGTTGCACCACAGTTGGAGCAATACTGTTGAATCCAGAGATGTACTTTTTCATGAATGGCAGTGATGAATGTGTTTCCGGACTGgctaatgtacatttcagtgatGAATCACTACAAAAATGGATCACGTAATCTTAATGCTGAAAGTATTCATCAATTATTTGTCTAAGAGATATGAGCCGCTACCAAAGATAAAAATTATCTAGGACCCacgtggggaaaaaaagtggtATTGTGCTGTAAAAAAATGCCCTCCTCCCTTTTTaatcctctttcctcttttataTAAAGACAATGTGTAAGGTGTTTACTTTAACGTGAGTGTATTCTTTGCTTCTCTCCAGACAAAATGCTTTGTAACGGTTCATCCTCATGCTGGAATGTTACATAaaattatctttatttta

Function

symbol description
tmem222 Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 222

GO: NA

KEGG:

id description
K20726 TMEM222; transmembrane protein 222

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805492.1 True 1386 mRNA 0.42 6 17486166 17489474

Neighbor

gene id symbol gene type direction distance location
wdtc1 wdtc1,LOC102795681 coding upstream 1313 17475568 ~ 17484853 (+)
cdcp1a NA coding upstream 40972 17439093 ~ 17445194 (+)
LOC120561781 tmem158,LOC102794155 coding upstream 49362 17435174 ~ 17436804 (+)
mrpl13 mrpl13 coding upstream 323468 17149825 ~ 17162698 (+)
LOC120562784 cpq coding upstream 356553 17109876 ~ 17129613 (+)
LOC120562050 LOC103366409 coding downstream 122 17489596 ~ 17491941 (+)
kdf1a kdf1,LOC104937957 coding downstream 2970 17492444 ~ 17497733 (+)
gpatch3 gpatch3 coding downstream 19582 17509056 ~ 17512860 (+)
gpn2 gpn2 coding downstream 23553 17513027 ~ 17517296 (+)
arid1aa arid1a coding downstream 30530 17520004 ~ 17535611 (+)
G73027 NA non-coding upstream 23139 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 82539 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 117391 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 420255 17065589 ~ 17065911 (+)
G72879 NA non-coding upstream 494177 16991716 ~ 16991989 (+)
LOC120562054 NA non-coding downstream 11115 17500589 ~ 17504921 (+)
G73186 NA non-coding downstream 434476 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 625241 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 635520 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 637949 18127423 ~ 18127887 (+)
ubxn11 NA other upstream 25048 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 33598 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1413965 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1925874 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2853445 14626478 ~ 14632721 (+)
G73123 phactr4 other downstream 156039 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 261456 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 909582 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 966100 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 976954 18466428 ~ 18470078 (+)

Expression


Co-expression Network