gpn2 (gpn2)


Basic Information

Item Value
gene id gpn2
gene name gpn2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17513027 ~ 17517296 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805497.1
gcatgcttttattttgatatctCGGTAACGTGACCCGGATGTAATTTAGAGTAGCTTTAGCCAGTTAGCTAGTAGAAATTGTTGTACGCATGCAAACATAACAGCGGCAGACGGTATCAACCTGGATGCTGATGTGGCCCCTCTGACGTCCTGGTCCCATCTAATCAGCTCTCCAGTCCCCGCGGCACTGAAACCATGTCCAGCCAGACCGGAGTGACGCCCTCCCTGCGCTTCGGCCAGGTGGTCATTGGACCCCCAGGCTCTGGAAAAACCACTTACTGTCAAGGAATGCAGGAGTTCCTTACTCGCATGGGGCGCAAGGTGGTCGTGGTGAACATGGACCCTGCCAACGAACAACTACCGTATTCCTGTGCGGTGGATATCTCAGAGCTGGTCACTCTGGACGACGTCATGGAGGGTTTGAAGCTTGGGCCCAACGGTGGGCTCCTCTACTGTATGGAGTATGTTGAAGCAAATCTGGACTGGTTAGAAAACAAGCTGAAACAGCACAGTGACTGTTATTTCTTGTTTGACTGTCCTGGACAAGTGGAGCTCTACACCCACCAAAGTTCAGTAAAGAATATATTCTCACAGCTGGCCAAGTGGAATTTCAGGCTCACAGCAGTGCACCTTGTGGACTCGCACTACTGCGCTGACCCAGCCAAGTTCATCTCTGTGCTGTGTACCTCCCTGTCCACCATGCTGCATGTGGAGCTTCCACACGTCAACATCCTCTCCAAGATGGACTTGATTGAGCAGTATGGCAAGCTGGCCTTCAACCTCGACTTCTACACAGAAGTCATGGACCTGACCTATCTTCTCGATCATCTGGCTGCAGaccccttttttaaaaaattcCACCGTCTAAATGTAAAGTTGGCAGAGGTCATACAAGATTACAGCCTCGTCTCCTTTGTGCCTCTCAATGTACAGgacagagagagcaTGATTCAGGTCTTACGAGCAGTGGACAAAGCCAACGGCTACTGCTTTGGAGACCTAGAGGAGAGGAATCTGCAGGCCATGATGTCAGCTGCTGTGGGGGCAGACTTCCAGTTTGACTCTACTCTTGGAGTGCAAGAGCGGTATGTTGAAACCAGCGGAAAGACTGTGGAGGAGGAAATGCTGGATCTGTAAATTGAAAAGCCCAAATAACAGGACAAAACTGGTTGCCTTTTTAGCATCACTATACCAGGGGAGTCTTGGCAACATCCATCTCACTTGGCCTGAATTCTGAGCCTCTCTACAAACGCAGTGGAGAGATAGGAACTAAATTTGGGCGCTGAAGATGCTTCAAGGTTGCACCACACCTCATAAAAATCACGATGAGGATGACTGAAGGGAGTAAATGCAGAGCTTTTCTTCAGTTATTGTTGTGAGTGGTgtgatttttgtattttttgcaaGGAAATCTTCAATAAATGTCAatacattttcttaaaatgtattaaatgtaaGGGCCCTCAtttaggttttgttttgttagatGTGGATTGTTCCATATTTTTGTGAACACTCAGGTAAAATGTCCATGGGTAAATCATATTCATACTGAAACAATAAAGTAACTGCAATTAATATAAA

Function

symbol description
gpn2 Predicted to enable GTPase activity. Orthologous to human GPN2 (GPN-loop GTPase 2).

NR:

description
PREDICTED: GPN-loop GTPase 2

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K24104 GPN; GPN-loop GTPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805497.1 True 1584 mRNA 0.47 6 17513027 17517296

Neighbor

gene id symbol gene type direction distance location
gpatch3 gpatch3 coding upstream 167 17509056 ~ 17512860 (+)
kdf1a kdf1,LOC104937957 coding upstream 15294 17492444 ~ 17497733 (+)
LOC120562050 LOC103366409 coding upstream 21086 17489596 ~ 17491941 (+)
LOC120562051 tmem222 coding upstream 23553 17486166 ~ 17489474 (+)
wdtc1 wdtc1,LOC102795681 coding upstream 28174 17475568 ~ 17484853 (+)
arid1aa arid1a coding downstream 2708 17520004 ~ 17535611 (+)
pigv pigv coding downstream 19234 17536530 ~ 17539422 (+)
zdhhc18a zdhhc18,LOC100695947,LOC102211057 coding downstream 23761 17541057 ~ 17550194 (+)
tent5ba fam46b,LOC102799042 coding downstream 45177 17562473 ~ 17567266 (+)
tcea3 tcea3,LOC103388456 coding downstream 66727 17584023 ~ 17593027 (+)
LOC120562054 NA non-coding upstream 8106 17500589 ~ 17504921 (+)
G73027 NA non-coding upstream 50000 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 109400 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 144252 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 447116 17065589 ~ 17065911 (+)
G73186 NA non-coding downstream 406654 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 597419 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 607698 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 610127 18127423 ~ 18127887 (+)
G73232 NA non-coding downstream 611723 18129019 ~ 18129219 (+)
ubxn11 NA other upstream 51909 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 60459 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1440826 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1952735 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2880306 14626478 ~ 14632721 (+)
G73123 phactr4 other downstream 128217 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 233634 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 881760 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 938278 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 949132 18466428 ~ 18470078 (+)

Expression


Co-expression Network