pigv (pigv)


Basic Information

Item Value
gene id pigv
gene name pigv
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17536530 ~ 17539422 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805504.1
GGAAGTGAAAAGTCCCGTTCGAAACGAAGCAGAGCTGCTGCAGTATTGAGGATGTGAGGACAAAGAATGCAACTGAGAAAACCCGAAAACAAACGCTGATTGACGACGGGTATCGGTCTAATAAAATTAGTGTTTACCTTCACCTAAATTTATAAAACCAATGAAAACGCGAAACTTTCAGAATCTCGTTCGCCGAGTTATGTTGTCCTAAGCTAGCTATGTTTTATAGACAATATGACGAATCCAGCAGTGACTGTCTCGTAGCAGCGACAATGCTCAGGCCTGTCATAACCGGCTTTTTCGGATTTTCTCCGTCACATCAATGACTATGGATGTCAGAGCAGTTCTGGAGTTTGCCACAGTTACCAGGGGTCTGTCGTTGTTTTTGCAGGCTGTCTTCAATGCTGTCATCCCTGACCATGATGCTGATGCGTTCAGACCCCCACGGACAGAGGAGCCTCTGTACTTGGACTCCGCAGTGGAGTGGTTGCTGGGTGGCCTCTCTCACTGGGATGCCGAGCACTTCCTCTTCATTGCAGAGAGAGGATACCTTTATGAGCACAACTTTGCTTTCTTCCCCCTTTTTCCCATCATCCTCCGAGGGCTGGCCGAGACGCTGCTGTGGCCCCTGAGCAGCTGGCTGAGTGTGCGGGGGCGTTTGCTGGTGGCTGTGGCTCTGGGGAACAGTGCCCTCTTCCTGCTGAGTGTGGTCGCCTTGTACGCGCTCAGTAGGATAGTTCTTCAGGACAGGCGTCTTGCTCTGCTCTCCAGCCTGCTGTACTGCATCACACCTGCCAATGTTTTCATGACCGCTGGATACTCCGAGAGCCTGTTTGCTGCGCTCACATTTGGTGGTCTGTTCCTCCTGGAGAAAGGATTCACCTTCCGAGCCTGCCTGGCTCTCAGTATAGCCACTGCAGCACGATCTAATGGACTTGTTAACATAGGGTTTCTACTCTATCTTCCATCACTGCACGCTATTTCCCAAATTCGTGTGTATCGAACAACGACAAAAGGCCACAGTAAAGTCTTCCATTATATCTGGGCCATCATCCGTCTCCTGCTTACCTCCCTCTTGGGAACTGCAATTATTGCCCTTCCCTTCTTTGCTTTCCAGTACTATGGGTATAGGACGTTTTGCACACCATCGGTCTCCTTGGAACGGATCCCCCCTGCTCTTCTGTCGCTGGCTGAACTAAAGGGCTACCGGGTTCCAGATGAAAATGGTCCACCGCCCCTCTGGTGCATGAGACCTCTCCCCCTGCTTTATTCTCATATCCAGGATGTTTATTGGGATGTAGGCTTCCTCCGCTACTTTGAGCTAAAGCAGATACCAAACTTTATTCTGGCTCTACCTATGGCTACCCTCGGCATAATGGCAGCATATGCATATTTTCAAGCCAATCCAGAACTGTGTCTGAGACTCGGGCTTTGGGAGACAGATGCAAATAAACGACTTGACAAACCTACACCAGGATTGTTCAATCCCAGAGTGTTCGTGTATGTTGTACATTCAACAGTACTTCTGGCGTTTGGAAcgttgtgcatgcatgtgcagGTTCTAACCAGATTCATGGCCTCCTCGACTCCCGTGCCCTTCTGGATAAGTGCACACCTGCTTCTCCTCAATGAACCACTTCTTCATCGAAGAAAGACCTCAAATCCCAATGtacagctacagacacattcCAGGAATGGATGCAAGCACACACCTCAAAACCCCATCATTGCACTTCTGCCACACTTTAAAACCTGTTCTCCTACCACACAGAGCGTCCTGGGATACTTCCTCTCTTACTGGGTGCTGGGCCTGGCACTGCATTGTAACTTCTTGCCATGGACATGACTTAAGCTTTAAATGCAATATCTCTATTAAGGACTGGGCTATACATCATGTttagatctcacacacacacactttacagtaCATCAACAGACCATTTTTGTTTTGGCACTAATTGTTGAAAATGAACTCAATAACTTCAATTTGGGTAAATAAATGCAatgcaaaaaaagtaaaagtacttattatATTTATGTTGCCCTGTCCTACATTGAACTTATTGACATGCCTACATTTTTGATGCAGATTTATTCATGCAATAGTCAACTAATTTGACTTGGATTTTTAACAGTTAGAGAACAAACTCAAATGTACAATACTCCTTGAAACTTTATTGAACACTGTTTAACTGTAAATATTGGGGAAGATTATGCTTGTACTTGAAAATGAAAACTTTTTGTTTCTTACTGAGGTCCTGCTGaagcataacattttatttactctACTTTAATATTGCATGTTTTCGAAGAATTATTCCAAGTTATAGTTTGGGATTTTTGAatgtgaatgaaaaaaaaaataaagattttgtTGCTGTTTAAGGGTCctaaatttagttttattttcatgtaGAAGTAATCCTTTTTTTGAGGCATTAATGTAAAACTGCtatattgtgttttgttgtaaAGAACATTGGCTACCAAAGTTGCACTGGAAAGTTTACCCTTGAATTAAATATTAAACTAAATGTGATAAATCTAAAA

Function

symbol description
pigv Predicted to enable mannosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be part of mannosyltransferase complex. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human PIGV (phosphatidylinositol glycan anchor biosynthesis class V).

NR:

description
PREDICTED: GPI mannosyltransferase 2

GO:

id name namespace
GO:0006506 GPI anchor biosynthetic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K07542 PIGV; GPI mannosyltransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805504.1 True 2550 mRNA 0.44 3 17536530 17539422

Neighbor

gene id symbol gene type direction distance location
arid1aa arid1a coding upstream 919 17520004 ~ 17535611 (+)
gpn2 gpn2 coding upstream 19234 17513027 ~ 17517296 (+)
gpatch3 gpatch3 coding upstream 23670 17509056 ~ 17512860 (+)
kdf1a kdf1,LOC104937957 coding upstream 38797 17492444 ~ 17497733 (+)
LOC120562050 LOC103366409 coding upstream 44589 17489596 ~ 17491941 (+)
zdhhc18a zdhhc18,LOC100695947,LOC102211057 coding downstream 1635 17541057 ~ 17550194 (+)
tent5ba fam46b,LOC102799042 coding downstream 23051 17562473 ~ 17567266 (+)
tcea3 tcea3,LOC103388456 coding downstream 44601 17584023 ~ 17593027 (+)
oprd1b oprd1,LOC104947907,LOC104938665,LOC103361913 coding downstream 78326 17617748 ~ 17623689 (+)
LOC120561605 NA coding downstream 200410 17739832 ~ 17741380 (+)
LOC120562054 NA non-coding upstream 31609 17500589 ~ 17504921 (+)
G73027 NA non-coding upstream 73503 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 132903 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 167755 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 470619 17065589 ~ 17065911 (+)
G73186 NA non-coding downstream 384528 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 575293 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 585572 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 588001 18127423 ~ 18127887 (+)
G73232 NA non-coding downstream 589597 18129019 ~ 18129219 (+)
ubxn11 NA other upstream 75412 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 83962 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1464329 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1976238 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2903809 14626478 ~ 14632721 (+)
G73123 phactr4 other downstream 106091 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 211508 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 859634 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 916152 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 927006 18466428 ~ 18470078 (+)

Expression


Co-expression Network