zdhhc18a (zdhhc18,LOC100695947,LOC102211057)


Basic Information

Item Value
gene id zdhhc18a
gene name zdhhc18,LOC100695947,LOC102211057
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17541057 ~ 17550194 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805505.1
aaaaaaaaggaaatgtgtagctaacgttactgccgCAAGGAGCTTGAGCCGATGCTCGTCCGTTGGTGTCGGATATTTGATAATAGGCTATTAATATAACAAAAGGAGTACTAATATTTATGAATGGCTTTAATTTAACTAGCTACCAAAGATGGTAGTTAACCTTGAGTCTACTCGGGAACTGATTCAGCTCGTAAAACAGTGCTAAAGAGAAGAATGCCTTTGCTGgttcgctagctagctagcgttagctagctttCAGGATGTGCAGCTGAACGCTAACCGAACAGGCTAAATATCAACGTACAATGACTGCTTCTTGAGAGTACAGTCTCTCGAAAACGCTGCGAGAAAggagtgttttgtgtgtgcctTTAGCTACCTCCGAACAGCGTCGATACTGTTTACATGATGAAGAACTGCGAGTACCAGCAGATTGACCCGCGGGCGCTGTCGGTGTCGCCCTCGTCCGCACAGAACCACACCGAGAAGAAAGTGCAGCGGTCGCGGAGGAAATGGGAAGTGTTCCCAGGAAAGAACAGGTTTTTCTGCGATGGACGGATCATCCTGGCCAGACAGAGCGGTGTCCTTCCTCTGACACTGGGCCTTATTGTTGTCACGTGTGGCCTTTTCTTTGCATTCGATTGCCCATTCCTGGTAGAGCATCTGACCGTCTTTATACCTGTGATTGGTGGGgtgctttgtgtgtttgtgctcctCTCCCTGCTGAGAACCAGCTTTACAGACCCAGGCATCTTACCTAGGGCCACCCCAGATGAAGCAGCAGACATAGAGAAGCAGATAGATACCTCAGGATCCTCTACGTATCGCCCCCCTCCGCGAACCAAGGAGATCCTCATCAACCAGCAGGTGGTAAAGCTCAAATACTGCTTCACTTGTAAAATGTTCCGCCCTCCTCGGACCTCCCACTGCAGCCTGTGTGACAACTGTGTGGAACGATTTGATCACCACTGCCCGTGGGTGGGGAACTGTGTGGGCAAACGCAATTACCGCTTTTTCTACAGCTTCAtcatctctctgtcttttctgaCATCTTTTATATTTGGCTGTGTCATCACGCACCTTACCCTGCgTTCTCAAGAAGGTAAAAACCTTGTTCAAGCCATTCAAGAGAGCCCTGCCAGTGTGGTGGAGTTGGTGATTTGTTTCTTCTCCATCTGGTCTATTATGGGCCTCTCAGGCTTCCATACGTACTTAGTAGCCTCCAACCTCACAACAAATGAAGACATAAAGGGCTCCTGGTCAAGTAAAAGGTGTGCAGAGGATTCTGGGAACCCGTACAGTTACAACAGTATTATAACCAACTGCTGTGCGACGTTATGTGGCCCCATGCCCCCAAGTCTGATTGACAGAAGAGGTTTCCTGCCTTTTGATGAAGCAATCCCTGCTGCTTCGGCCTCGGAGATGGAGCTGCCTCGCTTCGCAGCCAAGAATGACGCACACATGTGCACGCAGAGCACCAAGGATGTGTTGGAGAGGGTGGTTCACTCTTTCGACTCTCATGGCCTGTGCCCCCCTGGAACCCCTAAGACCACCCCTCTGGGCCTGGAGGTTTCCAGCATGGCAGCACCTTCCACGGAACATTCACCCTCCGCTGGCTGCTCAGGCCAGCACGCCCTCCAGCCTGTGGCCGCTCCTTGCCCCCCATTCAGCAGGAGCAGCAAAAGGAGAGACTCGCTGCACTCCTTCAACCCAGCCTTCCGCCTGGCTTCTCCCTCCCCGCCGCTGAGCCGCACCACCTCGATCTTAGACGATGCAACCGACGTGGGCTTCATCCCACTACCCTGAGTCCACCCAGTAACCAGAAGAGAACAGGAGGAGTCGTAGTGCACTCAACGCCACTCCGTATCACTGGCTACAAAGGACCTTTTCATAGTGGTGGTCAcgctgtgtgttgctgtttgaTATCTCAAGATGTCATTCTGATAAGTTGATTAAGCGTTACCTGGAGGCTTTTTATGTTCTGTGAGTTTTATCAACAGTGTCCTACTATACTACACGTATGTGTCCTTCAGGATGAACGTAAATCTTAGTAATACTTGGAAGCACAAAAGagagatatttttttaacaccTTTTTACTAAGACACCCAGAACATGCCTCCACACCTTCCACAGAACCTCAAGCCATGCGTCACAGCCGCAGCGTTTAAGTTCCTGCTAATATATTATGCAACCAAGTCTTCAAATCTGGGAATAATTACCATATGAGTGTGGATGCAGGAAGTACAGAAATAGATTTACTGAACTGGCATGCACTGAATAGTGAGCCATTTCAGGGTTGTCAACTCAAAAGTTGGCCTTATGTCATATCCTGTCACTTCCTGTCATACATCATCCAGTGTCATCAGGTGGATCAGTTTGACAGGATTCAGATGAATGAGCAATCAGAGTTTAAGGAAGGtgcagtttttaaatgtttgcataTCGAGGTCTTTGCTGTAATTTGTAATCGGTTGTGCATGTCTTGTGTATCAGATGCTCTTCTAGGCTAAATGGCaaacttcttttctttttgtgaagTGTATCACTTAGATACTAAGACTATCACTGAAAGATGATACTTAGAACAGGTAAAACTGAGTGAATTTGTTCAGATATTGTTCATGTATGACTGGATACTGATGATGAAATAGCTCCTCCACATAGTTTATAATAACTCGACGTTGTTGCTTCATCTAATTTGTTGGATGTCAAAACAAAGTATTTACTGTTATACAAAATCAAATTTGCTGTTGCCCACCAAGACTTGGGTTGCAGTATTGTTCTCTGACGCACTGTCTCCTATTAATGTAATCTACTAGGACGCTTTCAGTACGAGGGagcatctgtttttttctttgcctcGGGGCACATCGACCATACGTTGCCTGTCATGAGTGTGTTGGTGGTTACAGCACAGACTCGACATATGGACTGTTTCAGCGAGAGTAATGTTTCAGGAATGTTGATGAGGTCTcttcatgctcattttcatggCTGTGACCTTTTGCTCTTTTTACAGCATGACACTTAATCTGTGATGGAGTATACTGTAGTAACAGTAAATAGCAGGGGGTAGTTTGTGCCACTAGGGGGCAGCATGTGAATGAGGATTACAGCCCAGTCGAAGGACAATTTAGTAACATGAAAACCACTAGAAGAAAGGCCTTTTgatgtttgtatttattttttgtaattgaGCATTGAAGTTGGTTATAGTTGCGAAGATTCACGTTGCCATAGTCAGTGGGTCGTTCATCTATCAGTCTGCATCGAGACCCATAGGTTTGTGTAGACATTTACAAGCAGTGCTTGTATGAACAaagtttgtttgtattttgtagGATGTAACAGTGGAACTGTAACATTTGGTCAATAAAAAAGTGATCACATTTTGTTGAA
>XM_039805506.1
aaaaaaaaggaaatgtgtagctaacgttactgccgCAAGGAGCTTGAGCCGATGCTCGTCCGTTGGTGTCGGATATTTGATAATAGGCTATTAATATAACAAAAGGAGTACTAATATTTATGAATGGCTTTAATTTAACTAGCTACCAAAGATGGTAGTTAACCTTGAGTCTACTCGGGAACTGATTCAGCTCGTAAAACAGTGCTAAAGAGAAGAATGCCTTTGCTGgttcgctagctagctagcgttagctagctttCAGGATGTGCAGCTGAACGCTAACCGAACAGGCTAAATATCAACGTACAATGACTGCTTCTTGAGAGTACAGTCTCTCGAAAACGCTGCGAGAAAggagtgttttgtgtgtgcctTTAGCTACCTCCGAACAGCGTCGATACTGTTTACATGATGAAGAACTGCGAGTACCAGCAGATTGACCCGCGGGCGCTGTCGGTGTCGCCCTCGTCCGCACAGAACCACACCGAGAAGAAAGTGCAGCGGTCGCGGAGGAAATGGGAAGTGTTCCCAGGAAAGAACAGGTTTTTCTGCGATGGACGGATCATCCTGGCCAGACAGAGCGGTGTCCTTCCTCTGACACTGGGCCTTATTGTTGTCACGTGTGGCCTTTTCTTTGCATTCGATTGCCCATTCCTGGTAGAGCATCTGACCGTCTTTATACCTGTGATTGGTGGGgtgctttgtgtgtttgtgctcctCTCCCTGCTGAGAACCAGCTTTACAGACCCAGGCATCTTACCTAGGGCCACCCCAGATGAAGCAGCAGACATAGAGAAGCAGATAGATACCTCAGGATCCTCTACGTATCGCCCCCCTCCGCGAACCAAGGAGATCCTCATCAACCAGCAGGTGGTAAAGCTCAAATACTGCTTCACTTGTAAAATGTTCCGCCCTCCTCGGACCTCCCACTGCAGCCTGTGTGACAACTGTGTGGAACGATTTGATCACCACTGCCCGTGGGTGGGGAACTGTGTGGGCAAACGCAATTACCGCTTTTTCTACAGCTTCAtcatctctctgtcttttctgaCATCTTTTATATTTGGCTGTGTCATCACGCACCTTACCCTGCgTTCTCAAGAAGGTAAAAACCTTGTTCAAGCCATTCAAGAGAGCCCTGCCAGTGTGGTGGAGTTGGTGATTTGTTTCTTCTCCATCTGGTCTATTATGGGCCTCTCAGGCTTCCATACGTACTTAGTAGCCTCCAACCTCACAACAAATGAAGACATAAAGGGCTCCTGGTCAAGTAAAAGGTGTGCAGAGGATTCTGGGAACCCGTACAGTTACAACAGTATTATAACCAACTGCTGTGCGACGTTATGTGGCCCCATGCCCCCAAGTCTGATTGACAGAAGAGGTTTCCTGCCTTTTGATGAAGCAATCCCTGCTGCTTCGGCCTCGGAGATGGAGCTGCCTCGCTTCGCAGCCAAGAATGACGCACACATGGAGGAGAACTGTCAGGATTTTGCTTTGTCCTGCACAGCCTGAAGGGCACTGCTGCATGTAGACGGTTGATGTGCACGCAGAGCACCAAGGATGTGTTGGAGAGGGTGGTTCACTCTTTCGACTCTCATGGCCTGTGCCCCCCTGGAACCCCTAAGACCACCCCTCTGGGCCTGGAGGTTTCCAGCA

Function

symbol description
zdhhc18 Enables palmitoyltransferase activity. Involved in peptidyl-L-cysteine S-palmitoylation. Located in Golgi apparatus.

NR:

description
palmitoyltransferase ZDHHC18-like isoform X2

GO: NA

KEGG:

id description
K16675 ZDHHC9_14_18; palmitoyltransferase ZDHHC9/14/18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805505.1 True 3404 mRNA 0.46 9 17541057 17550194
XM_039805506.1 False 1653 mRNA 0.50 10 17541057 17548372

Neighbor

gene id symbol gene type direction distance location
pigv pigv coding upstream 1635 17536530 ~ 17539422 (+)
arid1aa arid1a coding upstream 5446 17520004 ~ 17535611 (+)
gpn2 gpn2 coding upstream 23761 17513027 ~ 17517296 (+)
gpatch3 gpatch3 coding upstream 28197 17509056 ~ 17512860 (+)
kdf1a kdf1,LOC104937957 coding upstream 43324 17492444 ~ 17497733 (+)
tent5ba fam46b,LOC102799042 coding downstream 12279 17562473 ~ 17567266 (+)
tcea3 tcea3,LOC103388456 coding downstream 33829 17584023 ~ 17593027 (+)
oprd1b oprd1,LOC104947907,LOC104938665,LOC103361913 coding downstream 67554 17617748 ~ 17623689 (+)
LOC120561605 NA coding downstream 189638 17739832 ~ 17741380 (+)
stmn1b stmn1,LOC100709726,LOC101465203,LOC105919219,LOC108245970,LOC102218266 coding downstream 191692 17741886 ~ 17747026 (+)
LOC120562054 NA non-coding upstream 36136 17500589 ~ 17504921 (+)
G73027 NA non-coding upstream 78030 17427828 ~ 17463027 (+)
G73019 NA non-coding upstream 137430 17392268 ~ 17403627 (+)
trnar-acg_16 NA non-coding upstream 172282 17368703 ~ 17368775 (+)
G72862 NA non-coding upstream 475146 17065589 ~ 17065911 (+)
G73186 NA non-coding downstream 373756 17923950 ~ 17926628 (+)
G73216 NA non-coding downstream 564521 18114715 ~ 18116323 (+)
G73230 LOC104960016 non-coding downstream 574800 18124994 ~ 18127318 (+)
G73231 NA non-coding downstream 577229 18127423 ~ 18127887 (+)
G73232 NA non-coding downstream 578825 18129019 ~ 18129219 (+)
ubxn11 NA other upstream 79939 17456643 ~ 17461118 (+)
G73031 LOC103366415 other upstream 88489 17449585 ~ 17452568 (+)
G72750 LOC104952694,LOC106925895 other upstream 1468856 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1980765 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2908336 14626478 ~ 14632721 (+)
G73123 phactr4 other downstream 95319 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 200736 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 848862 18399056 ~ 18420721 (+)
LOC120562807 NA other downstream 905380 18455574 ~ 18461326 (+)
LOC120562806 NA other downstream 916234 18466428 ~ 18470078 (+)

Expression


Co-expression Network