s100a10b (LOC104962190)


Basic Information

Item Value
gene id s100a10b
gene name LOC104962190
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22114119 ~ 22115560 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805520.1
ATACTGGGCGTTGCCAAGCGCACTATAAATTCTTGAATAAGCTTCCAGTGAGCTTCTCACTCTTCACTGAATCTCAAACTTGTCTGCCTTTTTTTGTCCAGCATCCACTTCTGCAGCCATGACTGAGTTGGAGAATTGCATGGAGTCCCTGATTAAGATATTTCACCGCTATGCCGATGAAGACGGCGATGCAACGACCTTAACCAAGAAAGAACTGAAAAAACTAATGGAGACGGAATTACCCACCTTCCTGAAAACCCAGAAGAACCCCAAAACTGTGGACTGCATATTGAAAGATTTGGACCAGAACAAAGATGATAAGTTGGACTTTGAAGAGTTTCTTCCCCTTGTCGTCGGCCTCTCGATGGCCTGTGAGAAGTGTTACATGCTCCATAATCAGAAGAAGGGCAAGAAGTGATGGGCAAATATGAGGGAGAGTAATTACGTTCAGTTTTTTAGTAGTAAAATAATTTTGTTGCACAAATGTGTGTCAGACTTACAAGTAAAAACTACCTTTAACAAGA

Function

NR:

description
PREDICTED: protein S100-A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805520.1 True 524 mRNA 0.42 3 22114119 22115560

Neighbor

gene id symbol gene type direction distance location
krtcap2 krtcap2 coding upstream 1057 22110516 ~ 22113062 (+)
LOC120562069 tmem107 coding upstream 3984 22107943 ~ 22110135 (+)
efna1b efna1,LOC104918192 coding upstream 33817 22069006 ~ 22080302 (+)
efna3b efna3,LOC105928532,LOC103478166,LOC103140801,LOC102234981 coding upstream 80852 21975192 ~ 22033267 (+)
flad1 flad1,LOC102778463 coding upstream 213467 21890529 ~ 21900652 (+)
s100w LOC104962188,LOC103388219,LOC106537129,LOC102230839 coding downstream 6144 22121704 ~ 22124437 (+)
adar adar coding downstream 51905 22167465 ~ 22183428 (+)
rab13 rab13 coding downstream 157532 22273092 ~ 22278899 (+)
fdps fdps coding downstream 173676 22289236 ~ 22295905 (+)
dap3 dap3 coding downstream 216856 22332416 ~ 22338933 (+)
G74673 NA non-coding upstream 77460 22036278 ~ 22036659 (+)
LOC120562851 NA non-coding upstream 388414 21724948 ~ 21725705 (+)
G74288 NA non-coding upstream 821739 21291042 ~ 21292380 (+)
G74287 NA non-coding upstream 823805 21289553 ~ 21290314 (+)
G74286 NA non-coding upstream 824744 21289171 ~ 21289375 (+)
G74729 NA non-coding downstream 56 22115616 ~ 22116026 (+)
G74732 NA non-coding downstream 4178 22119738 ~ 22121346 (+)
G74737 NA non-coding downstream 14092 22129652 ~ 22129914 (+)
G74760 NA non-coding downstream 68223 22183783 ~ 22184037 (+)
G74764 NA non-coding downstream 127257 22242817 ~ 22243033 (+)
slc50a1 slc50a1 other upstream 22156 22083669 ~ 22091963 (+)
G74633 tuft1,LOC102781808 other upstream 343833 21769548 ~ 21770286 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other upstream 510661 21599034 ~ 21603458 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other upstream 698225 21403035 ~ 21415894 (+)
LOC120563169 NA other upstream 777454 21331412 ~ 21336665 (+)
LOC120561539 NA other downstream 17018 22132578 ~ 22136234 (+)
LOC120561537 NA other downstream 21987 22137547 ~ 22139223 (+)
snx27b snx27,LOC102196713,LOC102288812 other downstream 24220 22139780 ~ 22154684 (+)
kcnn3 kcnn3,LOC104958859,LOC106930148,LOC106962094 other downstream 82152 22197712 ~ 22248527 (+)
rusc1 LOC104958857 other downstream 149379 22264939 ~ 22312520 (+)

Expression


Co-expression Network