fzd1 (fzd1,LOC104958298,LOC104925482)


Basic Information

Item Value
gene id fzd1
gene name fzd1,LOC104958298,LOC104925482
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7295946 ~ 7298242 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805594.1
gggagagcaGAACAGGTTGGAACAGCAGACTGAACGCTAGACGGTCAGACGCTTTCCTGGAGGAGTAACGTTACGCTTTCATCTTTTGCGGATTTTAACTGGAGAAGTCGAGTTTGTCATTCAAAATAATCTGTGGATTTGTTTTGTTCCATGTTTGTATCACCTCGGCTCGGTGTGAAGCCGGGGGAAAGGGAAGAGTGAAACCCCGCTGGAAGAAGCTGCTTTTACCTCGCTAAGAAACGCCAACAAAGAGCGTTCAAGgaagtaacgttagcctggcGAGGGGAACGCAAGTAAGTTAGCAACAAATACAAAGTACCGCGGCGGATACGTTCTTCACCATGGCTTACAACAGACTTCTTCGCGCCGTTttgactttgttgttttttacgcTGTTTCTGAACGTGGGGATCTTTCGAGTCAATGGCCAATACGGCGGCGGTGACCGAGGGATGTCTATACCGGAGCACGGATTTTGCCAGCCCATTTCCATCCCGCTGTGTACGGACATCGCGTACAACGAGACCATCATGCCCAACCTGCTCGGTCACACCAACCAGGAGGACGCCGGGCTGGAGGTGCACCAGTTCTACCCGCTGGTTAAAGTCCAGTGCTCTCCGGATTTAAAGTTCTTCCTCTGCTCCATGTATGCGCCCGTGTGCACGGTGCTCGAGCAGGCGCTGCCCCCGTGCCGCTCTCTGTGCGAGCGCGCGCGCCAGGGCTGCGAGGCGCTCATGAACAAGTTCGGCTTCCAGTGGCCCGACAGCCTCGCGTGCGAGACCTTCCCGGTACACGGCGCGGGAGAGCTCTGCGTCGGGCAAAACATGACGGACCGCCCCGAGCCGGACGGCCCCGCGCCGTATCCCACCGAGCGCCCGCCTCCTGGCCCCCCGAACGGTCAGTTCAGCTGCCCGGCTTCGCTCAGGGTGCCTCCCTACCTGAACTACCGCTTCCTCGGGCAGGAGAACTGCGGCGCTCCCTGCGAGCCGAAGAGGTCTCACGGGATGATGTACTTCAGCGAGGAGGAGCTGAAATTCGCCCGGATATGGATCGGCATCTGGTCGGTGCTGTGTTGTGCTTCCACCCTGTTCACGGTGCTGACCTATCTGGTGGACATGAAACGCTTCAGCTACCCGGAGCGGCCCATTGTCTTCCTCTCCGGCTGCTACACCATGGTGTCCATCGCCTACATCGCTGGCTTTCTGCTGGAGGACAAGGTGGTTTGCAATGACAGGTTCGACAATGACATAAGGACCGTGGTGCAGGGCACGAAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTACTTCTTCAGCATGGCCAGCTCGCTGTGGTGGGTCATCCTGGCTCTCACCTGGTTCCTGGCAGCGGGGATGAAATGGGGCCACGAGGCCATCGAGGCTAACTCCCAGTACTTCCACTTGGCCGCCTGGGCCGTGCCCGCCATCAAGACCATCACCATCCTAGCCGTAGGCCAGGTGGACGGAGACGTGTTGAGCGGGGTCTGCTTCGTTGGCATCAACAGCGTGGACGCCCTGCGGGGCTTCGTCCTGGCGCCGCTGTTCGTCTACCTGTTCATCGGAACCTCCTTCCTCTTGGCGGGCTTCGTGTCCCTATTTCGCATCCGGACCATCATGAAGCACGACGGCACCAAGACGGAGAAGCTGGAGAAGCTGATGGTGCGGATCGGGATCTTCAGCGTGCTGTACACGGTGCCGGCCACCATCGTCATCGCCTGCTACTTCTACGAGCAGGCGTTCCGAGAGCAGTGGGAGAGGACGTGGGTCAGCCAGACGTGCAAGACGTACGCCGTGCCCTGTCCCGTCCAGAACCACCCCAACATGAGTCCCGACTTCACCGTCTTCATGATCAAGTACCTGATGACGCTGATTGTGGGCATCACGTCCGGCTTCTGGATCTGGTCTGGGAAGACGCTGAACTCGTGGAGGAGGTTTTACACGAGACTGGCCCACAGTAAACAGGGGGAGACCACGGTGTGATGGGGTctcccacctcctccctccctcgGCCCTCACCTCACAGACTGCTTACTGACAAACTGAATGATAaggtacggaagaggattagggtcACATGTGAGAGAATGCAATTCTCACCTTTTTCttacaattcttttttttttattactttttttaagtaaaaaaaaatatcagaattctgactttaatctcagaaaaGTCAGAGATTGAAGTCAAAATTCTGAcctttttttactgaaaaaaactaaagtcagaattctgacttctTAGTATTCTGAGCtttttaggtaaaaa

Function

symbol description
fzd1 Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Predicted to be involved in canonical Wnt signaling pathway and non-canonical Wnt signaling pathway. Predicted to act upstream of or within Wnt signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Is expressed in central nervous system. Orthologous to human FZD1 (frizzled class receptor 1).

NR:

description
frizzled-1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0042813 Wnt-activated receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K02432 FZD1_7, fz; frizzled 1/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805594.1 True 2297 mRNA 0.55 1 7295946 7298242

Neighbor

gene id symbol gene type direction distance location
LOC120562880 NA coding upstream 266185 7004604 ~ 7029761 (+)
tsnare1 tsnare1,LOC101472715 coding upstream 490346 6636852 ~ 6805600 (+)
LOC120561876 NA coding upstream 1481304 5812877 ~ 5814642 (+)
LOC120562247 NA coding upstream 1938652 5355807 ~ 5357294 (+)
LOC120562920 mc5r,LOC101487483,LOC100693278,LOC102795483 coding upstream 2230273 4946358 ~ 5065673 (+)
LOC120561797 NA coding downstream 366996 7665238 ~ 7707591 (+)
LOC120561799 NA coding downstream 433584 7731826 ~ 7741034 (+)
rbm42 rbm42 coding downstream 469517 7767759 ~ 7783482 (+)
LOC120563115 LOC104936139,LOC100707989,LOC101475232,LOC102313234 coding downstream 587455 7885697 ~ 7904575 (+)
gpd1l gpd1l,LOC103034694,LOC108434205,LOC107600618 coding downstream 731440 8029682 ~ 8046678 (+)
G71013 NA non-coding upstream 388176 6907561 ~ 6907770 (+)
G71007 NA non-coding upstream 414884 6880782 ~ 6881062 (+)
G70998 NA non-coding upstream 424017 6871131 ~ 6871929 (+)
G70996 NA non-coding upstream 430001 6865609 ~ 6865945 (+)
G70993 NA non-coding upstream 434402 6861240 ~ 6861544 (+)
G71039 NA non-coding downstream 262 7298504 ~ 7299093 (+)
G71041 NA non-coding downstream 2117 7300359 ~ 7303114 (+)
G71054 NA non-coding downstream 76159 7374401 ~ 7376280 (+)
G71072 NA non-coding downstream 121455 7419697 ~ 7419897 (+)
G71080 NA non-coding downstream 208591 7506833 ~ 7511829 (+)
cdk14 cdk14 other upstream 3511 7039163 ~ 7292435 (+)
G70894 NA other upstream 1335092 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 1701046 5591199 ~ 5594900 (+)
LOC120562244 zdhhc3,LOC103364625,LOC101488043,LOC107102987 other upstream 1828856 5336214 ~ 5467090 (+)
LOC120562617 ldlrad4 other upstream 2403889 4810388 ~ 4892057 (+)
znrf2b znrf2 other downstream 158525 7456767 ~ 7500182 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other downstream 432780 7731022 ~ 7801380 (+)
G71309 NA other downstream 823359 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 985138 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 1450701 8748943 ~ 8751443 (+)

Expression


Co-expression Network