sim1a (sim1,LOC103355653,LOC103388874,LOC102313558)


Basic Information

Item Value
gene id sim1a
gene name sim1,LOC103355653,LOC103388874,LOC102313558
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 10215493 ~ 10241076 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805617.1
TACGCTGCTATCCATAAAGTCACATAGGATGGAAGATATGCGAATGCTGGGCTTTTTGGAGATTCTGCCTGGACACTTTCAACAGGCGTCAGTTTAGCAAACTGTCGGCTATCTGCGCAGAGGGCCTGATGTCCCCAGTGGTTCCACAATCCCTTTGAACATCAGGTGTGATGGATCCAAGTGTGCGGTGAGCCCTCCAATGGGCTGACCAAAGCGCCACTATAATCCTCAGAAATCCAGGAATTAGCCGCTCCCTGCTCGTCGCCAACCACCAGAAAACCTGGGAAATATGGGAATGGGTTCACGCGCCAGCAGCTGTGGATTTTAGGCCGAGCAGAGGGAGAATTCTAGTTCCATGTGTGGAGACGTCGCCGCTCCATTTCAATGCTACGAGACACCTGGACGGACAGTGACTGACCGCAGCGGGACCGAGAGTGGAAGAGCAGCCAGGCGGTGAAACAGAGTCGGCAACATGAAGGAGAAATCTAAAAACGCTGCCCGGACTCGGCGGGAAAAGGAGAATAGTGAATTTTATGAACTGGCTAAACTATTGCCCCTTCCGTCCGCTATCACCTCCCAGCTGGATAAAGCCTCAATCATCCGACTGACAACAAGCtacctgaaaatgagaatagTCTTTCCAGAAGGCCTTGGGGAGTCCTGGGGTCATGTAAGCCGCAGCACTTTGGATGGAGTCACCCAGGAGCTAGGCTCCCATCTCTTACAGACATTAGATGGCTTCATTTTTGTGGTTGCTCCAGATGGGAAAATAATGTACATATCAGAAACAGCATCAGTCCACTTGGGCCTGTCGCAGGTAGAGTTGACGGGAAACAGCATTTATGAATACATCCATCCAGCAGACCATGATGAAATGACAGCCGTCCTCACTGCACACCAGCCTTACCATTCACACTTTGTTCACGAATATGAGATGGAGCGCTCCTTCTTTCTGAGAATGAAATGTGTCCTCGCTAAAAGAAATGCTGGTCTTACCTGCGGAGGCTACAAGGTGATCCACTGTAGTGGCTACCTGAAGATCCGTCAGTACAGCCTGGACATGTCTCCGTTTGACGGCTGCTATCAGAACGTGGGGCTGGTGGCTGTCGGCCACTCGTTGCCACCCAGCGCTGTCACTGACATCAAACTGCACAGCAACATGTTCATGTTCAGGGCCAGCCTGGACATGAAGCTCATCTTCCTCGACTCGCGGGTTGCAGAGCTGACCGGCTACGAGCCTCAGGATCTAATTGAGAAGACTCTCTATCATCATGTCCACAGCTGTGACTCCTTCCACCTGCGATGTGCTCATCACTTGTGTGAGTTAGTGCTGGTGAAAGGTCAGGTCACCACAAAGTATTACCGTTTCTTGGCCAAGCCTGGTGGCTGGGTCTGGGTTCAGAGTTATGCAACCATTGTACACAACAGCCGCTCATCCCGACCTCACTGCATCGTCAGTGTCAACTATGTCCTCACGGAGACAGAGTACAAGGGCCTCCAGCTTTCTCTGGACCAGACCACATCCAAGGCCTCTTTCCCgtaccacagcagcagcaccgccgGCAGCCTTACGGAGAACTGCAGAACTCCCAAGAGCAGAGTATCCCGGCCCAAGACCAAAGCTAGACTCTCGCCATACAGACAGTATCCTAGTTTCCAGACGGAGCGATCCGAGTCGGACCAGGACAGTCCGTGGGGCAGCAGCCCCCTCACTGACTCAGCCTCCCCTCAGCTGCTGGAGCAGAGCGAAGGCCTGGACGCGTCCTGTGTGTACAGGCAGTTCCCCGATCCCCGCCCGCGCTGCTACAGCTTGTCTGACGAGCACCATCACGCCACCAGCGACGGCTACACCCACCTCCATGGTCAAGGACAGAGTTGTGAGCGTGGTCGATGTGAGGCGGGGCGTTATTTTCTCGGCGCACCTCCGACTGGCAGGGACGCGTGGTGGGGCAGCGCCCGGTCCGTCCTACCATTGAGCAAGAGCTCCTTGGAGAACCACGAGGGATATGACAGCAGCGTGCCGCACATCACAGCCATCCACAGCTACAACGGCCGGGGCCACTGGGACGAGGACAGCGTGGTCAGCTCTCCAGACGGAGGCTCAGCCAGTGACTCGGGGGATCGCTACCAAGCTGACCACTACCGCTGTAGCCCGCAGGAACCCAGCAAGATCGAGACGCTGATCCGTGCCACGCAGCAGATGATCAAGGAAGAAGAAAGTCGACTGCAGCTGCGCAAGGGCCCCCCGGATGCTCCACTGGGGCCGGCCAACGGGCTGCCCAAGGGCCCCGGTCCGTGCTTCACTCCTGAGTATACTCAAGGGCCGCTGCCGCTGCAGACGGTGGTGTGTCGAGGTCAGAGTCAGGCCGTCAGCCCCGCGCCCAGTCCCGCCCCCCTGTCCAGGCTCAGCAGTCCAGGTCCCGAGCACCTCCACAAGCCCAAAGACTACCTCCAAACAGATCTGTCCTCCTTCTCTTTGCCATTACACCACCCGTTTGTGCGGCCGGGTCCGTGCTCGGCTTCACCCGCCTCGGCCCCGGCCCTCTACCCCTCCCACACCCACCCGCGGCCCTACTTGGACAAGCATAAAGCCTACTCCCTGACAGGCTACGCTCTGGAGCACCTCTATGACCAAGAGAGCCTGCGGGGCTACTGCACCTCGGCCAACACGGGCCCCGCCCACTACGATGTGACCCCTCACCTCCGCATGCCATCAGAGCAGACCTCCGGACATAAAGGCACCTCTGTAATTATCAGCAGTGGCAGCTAACGCTCATCTAACACACGCAGGACGCCCCAGGTCACACAGCCTGAGCTCCAACAATAAGCCATCGTTATTCCGGATCCTGTTTTTCCATCATACCGATGACTTTCTTCATATTGTTGCTTCATTACACATGGAGCTAcatttagggctgggtatcattcaaAAATGTCCAATACTGGTTGTTACGTCCCTACTGTGTGTAGGGGTGGAGGACGGTAACAATTAAATAAGGCCAAGGGAAAGGCGAAACCATTTCAAGACGAATCaaattatttattgttaaactcaCGAAACTTAAAGCGGTCTCCTAAAAGGAAGACGAATGAATCGCAAAATGTAAACTAAAGAGCAAGGTTTTAAACACACAACTAAACTCAATTAACACAGCCGATAAGAGGATCACACCGGCTCTGGCTTCCACTGTAAGCCTCCACCTCTGCCACAGGCTCAGCACAGCCATTTAACGCCATTTTATAATCGTTACATCGTTACAGCTACGCAGCCTGAGCTGCGGGGTTACGTCACCCACAGCAGCACCCCTGGAGGGACTCGCACACGAGTAGAGAACAACAAAACACGGCACGTACcaccggtaccgataccaataccataTCTTCGATACCTGTTCCTGATCGCTACTTTTGAATAGCAATTTTATAAATTCCATTCGACAATCAATTACAACGTTACACAAATTGTAAGTGTccctacgacgtgtaacgttagacagctaATCAccaacattattagatcttgttagaagcatgctgcgtgctgattggctcactgacactggtgaaatttactccttaggtattgaaattgggtattgaatgacgagccTGTTTTTGTTAGATAGAGATAGCTTTTCgctgtctcttgtagctaatgtgactgaggGGTAAGCGAGatagagtgactgaagagagggagagccCAGCGGCGTTACAGCGAAGCCGTGACTCAGCGAAATAAAGCGGGTTTTCGCCGactcatcactagaaatgcaactgtagcaagcatgtcactatcaccaaagttatccacattcatatttacacgaaacaaat
>XM_039805618.1
GCCTAATAGCTCTGTAGTTAggctaaataattaaaaatacagTCACATTTCTGCAGAAAAATTCAAACAAGTTTCCTTATTAGTTTTACGTTTGCTAGCGACTCGATAGCTGTTTTATAGACAGACACAAGTGATGTCTTACCCAAATAACGGTAGGATAAATACAGTCACTAGGCAGGCCTATCTTACACATGTATTCATTCTATAGGGCCTGATGTCCCCAGTGGTTCCACAATCCCTTTGAACATCAGGTGTGATGGATCCAAGTGTGCGGTGAGCCCTCCAATGGGCTGACCAAAGCGCCACTATAATCCTCAGAAATCCAGGAATTAGCCGCTCCCTGCTCGTCGCCAACCACCAGAAAACCTGGGAAATATGGGAATGGGTTCACGCGCCAGCAGCTGTGGATTTTAGGCCGAGCAGAGGGAGAATTCTAGTTCCATGTGTGGAGACGTCGCCGCTCCATTTCAATGCTACGAGACACCTGGACGGACAGTGACTGACCGCAGCGGGACCGAGAGTGGAAGAGCAGCCAGGCGGTGAAACAGAGTCGGCAACATGAAGGAGAAATCTAAAAACGCTGCCCGGACTCGGCGGGAAAAGGAGAATAGTGAATTTTATGAACTGGCTAAACTATTGCCCCTTCCGTCCGCTATCACCTCCCAGCTGGATAAAGCCTCAATCATCCGACTGACAACAAGCtacctgaaaatgagaatagTCTTTCCAGAAGGCCTTGGGGAGTCCTGGGGTCATGTAAGCCGCAGCACTTTGGATGGAGTCACCCAGGAGCTAGGCTCCCATCTCTTACAGACATTAGATGGCTTCATTTTTGTGGTTGCTCCAGATGGGAAAATAATGTACATATCAGAAACAGCATCAGTCCACTTGGGCCTGTCGCAGGTAGAGTTGACGGGAAACAGCATTTATGAATACATCCATCCAGCAGACCATGATGAAATGACAGCCGTCCTCACTGCACACCAGCCTTACCATTCACACTTTGTTCACGAATATGAGATGGAGCGCTCCTTCTTTCTGAGAATGAAATGTGTCCTCGCTAAAAGAAATGCTGGTCTTACCTGCGGAGGCTACAAGGTGATCCACTGTAGTGGCTACCTGAAGATCCGTCAGTACAGCCTGGACATGTCTCCGTTTGACGGCTGCTATCAGAACGTGGGGCTGGTGGCTGTCGGCCACTCGTTGCCACCCAGCGCTGTCACTGACATCAAACTGCACAGCAACATGTTCATGTTCAGGGCCAGCCTGGACATGAAGCTCATCTTCCTCGACTCGCGGGTTGCAGAGCTGACCGGCTACGAGCCTCAGGATCTAATTGAGAAGACTCTCTATCATCATGTCCACAGCTGTGACTCCTTCCACCTGCGATGTGCTCATCACTTGTGTGAGTTAGTGCTGGTGAAAGGTCAGGTCACCACAAAGTATTACCGTTTCTTGGCCAAGCCTGGTGGCTGGGTCTGGGTTCAGAGTTATGCAACCATTGTACACAACAGCCGCTCATCCCGACCTCACTGCATCGTCAGTGTCAACTATGTCCTCACGGAGACAGAGTACAAGGGCCTCCAGCTTTCTCTGGACCAGACCACATCCAAGGCCTCTTTCCCgtaccacagcagcagcaccgccgGCAGCCTTACGGAGAACTGCAGAACTCCCAAGAGCAGAGTATCCCGGCCCAAGACCAAAGCTAGACTCTCGCCATACAGACAGTATCCTAGTTTCCAGACGGAGCGATCCGAGTCGGACCAGGACAGTCCGTGGGGCAGCAGCCCCCTCACTGACTCAGCCTCCCCTCAGCTGCTGGAGCAGAGCGAAGGCCTGGACGCGTCCTGTGTGTACAGGCAGTTCCCCGATCCCCGCCCGCGCTGCTACAGCTTGTCTGACGAGCACCATCACGCCACCAGCGACGGCTACACCCACCTCCATGGTCAAGGACAGAGTTGTGAGCGTGGTCGATGTGAGGCGGGGCGTTATTTTCTCGGCGCACCTCCGACTGGCAGGGACGCGTGGTGGGGCAGCGCCCGGTCCGTCCTACCATTGAGCAAGAGCTCCTTGGAGAACCACGAGGGATATGACAGCAGCGTGCCGCACATCACAGCCATCCACAGCTACAACGGCCGGGGCCACTGGGACGAGGACAGCGTGGTCAGCTCTCCAGACGGAGGCTCAGCCAGTGACTCGGGGGATCGCTACCAAGCTGACCACTACCGCTGTAGCCCGCAGGAACCCAGCAAGATCGAGACGCTGATCCGTGCCACGCAGCAGATGATCAAGGAAGAAGAAAGTCGACTGCAGCTGCGCAAGGGCCCCCCGGATGCTCCACTGGGGCCGGCCAACGGGCTGCCCAAGGGCCCCGGTCCGTGCTTCACTCCTGAGTATACTCAAGGGCCGCTGCCGCTGCAGACGGTGGTGTGTCGAGGTCAGAGTCAGGCCGTCAGCCCCGCGCCCAGTCCCGCCCCCCTGTCCAGGCTCAGCAGTCCAGGTCCCGAGCACCTCCACAAGCCCAAAGACTACCTCCAAACAGATCTGTCCTCCTTCTCTTTGCCATTACACCACCCGTTTGTGCGGCCGGGTCCGTGCTCGGCTTCACCCGCCTCGGCCCCGGCCCTCTACCCCTCCCACACCCACCCGCGGCCCTACTTGGACAAGCATAAAGCCTACTCCCTGACAGGCTACGCTCTGGAGCACCTCTATGACCAAGAGAGCCTGCGGGGCTACTGCACCTCGGCCAACACGGGCCCCGCCCACTACGATGTGACCCCTCACCTCCGCATGCCATCAGAGCAGACCTCCGGACATAAAGGCACCTCTGTAATTATCAGCAGTGGCAGCTAACGCTCATCTAACACACGCAGGACGCCCCAGGTCACACAGCCTGAGCTCCAACAATAAGCCATCGTTATTCCGGATCCTGTTTTTCCATCATACCGATGACTTTCTTCATATTGTTGCTTCATTACACATGGAGCTAcatttagggctgggtatcattcaaAAATGTCCAATACTGGTTGTTACGTCCCTACTGTGTGTAGGGGTGGAGGACGGTAACAATTAAATAAGGCCAAGGGAAAGGCGAAACCATTTCAAGACGAATCaaattatttattgttaaactcaCGAAACTTAAAGCGGTCTCCTAAAAGGAAGACGAATGAATCGCAAAATGTAAACTAAAGAGCAAGGTTTTAAACACACAACTAAACTCAATTAACACAGCCGATAAGAGGATCACACCGGCTCTGGCTTCCACTGTAAGCCTCCACCTCTGCCACAGGCTCAGCACAGCCATTTAACGCCATTTTATAATCGTTACATCGTTACAGCTACGCAGCCTGAGCTGCGGGGTTACGTCACCCACAGCAGCACCCCTGGAGGGACTCGCACACGAGTAGAGAACAACAAAACACGGCACGTACcaccggtaccgataccaataccataTCTTCGATACCTGTTCCTGATCGCTACTTTTGAATAGCAATTTTATAAATTCCATTCGACAATCAATTACAACGTTACACAAATTGTAAGTGTccctacgacgtgtaacgttagacagctaATCAccaacattattagatcttgttagaagcatgctgcgtgctgattggctcactgacactggtgaaatttactccttaggtattgaaattgggtattgaatgacgagccTGTTTTTGTTAGATAGAGATAGCTTTTCgctgtctcttgtagctaatgtgactgaggGGTAAGCGAGatagagtgactgaagagagggagagccCAGCGGCGTTACAGCGAAGCCGTGACTCAGCGAAATAAAGCGGGTTTTCGCCGactcatcactagaaatgcaactgtagcaagcatgtcactatcaccaaagttatccacattcatatttacacgaaacaaat
>XM_039805620.1
TACGCTGCTATCCATAAAGTCACATAGGATGGAAGATATGCGAATGCTGGGCTTTTTGGAGATTCTGCCTGGACACTTTCAACAGGCGTCAGTTTAGCAAACTGTCGGCTATCTGCGCAGAGGGCCTGATGTCCCCAGTGGTTCCACAATCCCTTTGAACATCAGGTGTGATGGATCCAAGTGTGCGGTGAGCCCTCCAATGGGCTGACCAAAGCGCCACTATAATCCTCAGAAATCCAGGAATTAGCCGCTCCCTGCTCGTCGCCAACCACCAGAAAACCTGGGAAATATGGGAATGGGTTCACGCGCCAGCAGCTGTGGATTTTAGGCCGAGCAGAGGGAGAATTCTAGTTCCATGTGTGGAGACGTCGCCGCTCCATTTCAATGCTACGAGACACCTGGACGGACAGTGACTGACCGCAGCGGGACCGAGAGTGGAAGAGCAGCCAGGCGGTGAAACAGAGTCGGCAACATGAAGGAGAAATCTAAAAACGCTGCCCGGACTCGGCGGGAAAAGGAGAATAGTGAATTTTATGAACTGGCTAAACTATTGCCCCTTCCGTCCGCTATCACCTCCCAGCTGGATAAAGCCTCAATCATCCGACTGACAACAAGCtacctgaaaatgagaatagTCTTTCCAGAAGGCCTTGGGGAGTCCTGGGGTCATGTAAGCCGCAGCACTTTGGATGGAGTCACCCAGGAGCTAGGCTCCCATCTCTTACAGACATTAGATGGCTTCATTTTTGTGGTTGCTCCAGATGGGAAAATAATGTACATATCAGAAACAGCATCAGTCCACTTGGGCCTGTCGCAGGTAGAGTTGACGGGAAACAGCATTTATGAATACATCCATCCAGCAGACCATGATGAAATGACAGCCGTCCTCACTGCACACCAGCCTTACCATTCACACTTTGTTCACGAATATGAGATGGAGCGCTCCTTCTTTCTGAGAATGAAATGTGTCCTCGCTAAAAGAAATGCTGGTCTTACCTGCGGAGGCTACAAGGTGATCCACTGTAGTGGCTACCTGAAGATCCGTCAGTACAGCCTGGACATGTCTCCGTTTGACGGCTGCTATCAGAACGTGGGGCTGGTGGCTGTCGGCCACTCGTTGCCACCCAGCGCTGTCACTGACATCAAACTGCACAGCAACATGTTCATGTTCAGGGCCAGCCTGGACATGAAGCTCATCTTCCTCGACTCGCGGGTTGCAGAGCTGACCGGCTACGAGCCTCAGGATCTAATTGAGAAGACTCTCTATCATCATGTCCACAGCTGTGACTCCTTCCACCTGCGATGTGCTCATCACTTGTTGCTGGTGAAAGGTCAGGTCACCACAAAGTATTACCGTTTCTTGGCCAAGCCTGGTGGCTGGGTCTGGGTTCAGAGTTATGCAACCATTGTACACAACAGCCGCTCATCCCGACCTCACTGCATCGTCAGTGTCAACTATGTCCTCACGGAGACAGAGTACAAGGGCCTCCAGCTTTCTCTGGACCAGACCACATCCAAGGCCTCTTTCCCgtaccacagcagcagcaccgccgGCAGCCTTACGGAGAACTGCAGAACTCCCAAGAGCAGAGTATCCCGGCCCAAGACCAAAGCTAGACTCTCGCCATACAGACAGTATCCTAGTTTCCAGACGGAGCGATCCGAGTCGGACCAGGACAGTCCGTGGGGCAGCAGCCCCCTCACTGACTCAGCCTCCCCTCAGCTGCTGGAGCAGAGCGAAGGCCTGGACGCGTCCTGTGTGTACAGGCAGTTCCCCGATCCCCGCCCGCGCTGCTACAGCTTGTCTGACGAGCACCATCACGCCACCAGCGACGGCTACACCCACCTCCATGGTCAAGGACAGAGTTGTGAGCGTGGTCGATGTGAGGCGGGGCGTTATTTTCTCGGCGCACCTCCGACTGGCAGGGACGCGTGGTGGGGCAGCGCCCGGTCCGTCCTACCATTGAGCAAGAGCTCCTTGGAGAACCACGAGGGATATGACAGCAGCGTGCCGCACATCACAGCCATCCACAGCTACAACGGCCGGGGCCACTGGGACGAGGACAGCGTGGTCAGCTCTCCAGACGGAGGCTCAGCCAGTGACTCGGGGGATCGCTACCAAGCTGACCACTACCGCTGTAGCCCGCAGGAACCCAGCAAGATCGAGACGCTGATCCGTGCCACGCAGCAGATGATCAAGGAAGAAGAAAGTCGACTGCAGCTGCGCAAGGGCCCCCCGGATGCTCCACTGGGGCCGGCCAACGGGCTGCCCAAGGGCCCCGGTCCGTGCTTCACTCCTGAGTATACTCAAGGGCCGCTGCCGCTGCAGACGGTGGTGTGTCGAGGTCAGAGTCAGGCCGTCAGCCCCGCGCCCAGTCCCGCCCCCCTGTCCAGGCTCAGCAGTCCAGGTCCCGAGCACCTCCACAAGCCCAAAGACTACCTCCAAACAGATCTGTCCTCCTTCTCTTTGCCATTACACCACCCGTTTGTGCGGCCGGGTCCGTGCTCGGCTTCACCCGCCTCGGCCCCGGCCCTCTACCCCTCCCACACCCACCCGCGGCCCTACTTGGACAAGCATAAAGCCTACTCCCTGACAGGCTACGCTCTGGAGCACCTCTATGACCAAGAGAGCCTGCGGGGCTACTGCACCTCGGCCAACACGGGCCCCGCCCACTACGATGTGACCCCTCACCTCCGCATGCCATCAGAGCAGACCTCCGGACATAAAGGCACCTCTGTAATTATCAGCAGTGGCAGCTAACGCTCATCTAACACACGCAGGACGCCCCAGGTCACACAGCCTGAGCTCCAACAATAAGCCATCGTTATTCCGGATCCTGTTTTTCCATCATACCGATGACTTTCTTCATATTGTTGCTTCATTACACATGGAGCTAcatttagggctgggtatcattcaaAAATGTCCAATACTGGTTGTTACGTCCCTACTGTGTGTAGGGGTGGAGGACGGTAACAATTAAATAAGGCCAAGGGAAAGGCGAAACCATTTCAAGACGAATCaaattatttattgttaaactcaCGAAACTTAAAGCGGTCTCCTAAAAGGAAGACGAATGAATCGCAAAATGTAAACTAAAGAGCAAGGTTTTAAACACACAACTAAACTCAATTAACACAGCCGATAAGAGGATCACACCGGCTCTGGCTTCCACTGTAAGCCTCCACCTCTGCCACAGGCTCAGCACAGCCATTTAACGCCATTTTATAATCGTTACATCGTTACAGCTACGCAGCCTGAGCTGCGGGGTTACGTCACCCACAGCAGCACCCCTGGAGGGACTCGCACACGAGTAGAGAACAACAAAACACGGCACGTACcaccggtaccgataccaataccataTCTTCGATACCTGTTCCTGATCGCTACTTTTGAATAGCAATTTTATAAATTCCATTCGACAATCAATTACAACGTTACACAAATTGTAAGTGTccctacgacgtgtaacgttagacagctaATCAccaacattattagatcttgttagaagcatgctgcgtgctgattggctcactgacactggtgaaatttactccttaggtattgaaattgggtattgaatgacgagccTGTTTTTGTTAGATAGAGATAGCTTTTCgctgtctcttgtagctaatgtgactgaggGGTAAGCGAGatagagtgactgaagagagggagagccCAGCGGCGTTACAGCGAAGCCGTGACTCAGCGAAATAAAGCGGGTTTTCGCCGactcatcactagaaatgcaactgtagcaagcatgtcactatcaccaaagttatccacattcatatttacacgaaacaaat

Function

symbol description
sim1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and protein heterodimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated and ureteric bud development. Predicted to be located in nucleus. Predicted to be part of chromatin. Implicated in obesity.

NR:

description
single-minded homolog 1-A-like isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09100 SIM; single-minded

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805617.1 False 3837 mRNA 0.53 12 10215493 10241076
XM_039805618.1 True 3923 mRNA 0.52 11 10215634 10241076
XM_039805620.1 False 3828 mRNA 0.53 12 10215493 10241076

Neighbor

gene id symbol gene type direction distance location
ascc3 ascc3 coding upstream 15088 10007275 ~ 10200405 (+)
hace1 hace1 coding upstream 1025404 9147615 ~ 9190089 (+)
bves bves coding upstream 1070739 9127850 ~ 9144754 (+)
popdc3 popdc3 coding upstream 1092406 9115711 ~ 9123087 (+)
LOC120562991 LOC103388880 coding upstream 1113991 9088184 ~ 9101502 (+)
LOC120562586 LOC104935658,LOC103355652,LOC101471248 coding downstream 87088 10328164 ~ 10357777 (+)
LOC120562578 NA coding downstream 127789 10368865 ~ 10378754 (+)
LOC120561655 tmem74,LOC103359617 coding downstream 275781 10516857 ~ 10518991 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding downstream 380116 10621192 ~ 10656796 (+)
rspo2 rspo2 coding downstream 421402 10662478 ~ 10729121 (+)
G71609 NA non-coding upstream 12902 10201676 ~ 10202591 (+)
G71607 NA non-coding upstream 211800 10003481 ~ 10003693 (+)
G71591 NA non-coding upstream 386186 9828594 ~ 9829307 (+)
G71562 NA non-coding upstream 759852 9455375 ~ 9455641 (+)
G71557 NA non-coding upstream 843545 9371004 ~ 9371948 (+)
G71723 emc2 non-coding downstream 339084 10580160 ~ 10591406 (+)
G71738 NA non-coding downstream 377181 10618257 ~ 10618575 (+)
G71741 NA non-coding downstream 502935 10744011 ~ 10744271 (+)
LOC120562885 NA non-coding downstream 507047 10748123 ~ 10752652 (+)
G71826 NA non-coding downstream 878843 11119919 ~ 11120208 (+)
G71610 NA other upstream 7296 10207415 ~ 10208197 (+)
trnay-gua_42 NA other upstream 1365773 8849632 ~ 8849720 (+)
trnay-gua_41 NA other upstream 1366156 8849249 ~ 8849337 (+)
trnay-gua_40 NA other upstream 1366922 8848483 ~ 8848571 (+)
trnay-gua_39 NA other upstream 1368012 8847392 ~ 8847481 (+)
LOC120561920 LOC106676202,LOC102303534 other downstream 504932 10746008 ~ 10751849 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other downstream 544578 10785654 ~ 10961130 (+)
G71743 NA other downstream 579219 10820295 ~ 10821500 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other downstream 1226269 11467345 ~ 11482423 (+)
mbpb mbp,LOC104918400 other downstream 1296108 11537184 ~ 11599226 (+)

Expression


Co-expression Network