smarcc1a (smarcc1)


Basic Information

Item Value
gene id smarcc1a
gene name smarcc1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 32166319 ~ 32193048 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805628.1
CATTCGAAAACTTGCACGGTGAGCGACGCCGTGGAGGAGAAAGACAACGCAGCgaacaaaacacacaatggCGACGGCGGCGACAACGGCAGGCGGAACGGGCTCAGGCGGACCGGCCACCGGTCCGGTCGGCGGCGGGACCGCAGTGGGACGAAAGAAGGACGGTGGTCCTTCCACGAAATTCTGGGAAAGCTCAGAGACGATTTCCCAGTTCGAGACGGTGCGGCAGTGGATCGGAAAGCACTACAAGAAgTATGTCCAGAATGACTCCCCCTCCAGTAAATCCTTGGCGGGCCTGGTGGTCCAGCTGCTGCAGTTCCAGGAGGATGCATTTGGACGCAGGGTCAACAATCCTGCCCTTACCAAGTTACCTGCCAAGTGTTTCCTGGATTTCAAGGCAGGAGGTGCTCTCTGTCACATCTTGGGTTCGGTCTACAAGTTTAAGAGCGAGCAGGGGTGGCGTAGATTTGACCTGCAGAATCCTTCCCGGATGGACAGGAACGTGGAAATGTTCTTAAATGTAGAGAAGAACTTGGTCCAGAACAACTGCTTGACTCGACCCACTGTCTTCCTGTCACCGGACGTTGAGCAGAAACAAGCCAGTAAGCTCAAAGACATCATCAAAAGGCACCAGGGCTCCATTACTGATGACAAGTCAAAGGCCACCCACCACATCTACCCCTCTCCAGCCCAACATGAAGAAGaggAATGGCTTCGCCCTGTCATGAAGAAAGACAAGCAGGTGCTGGTTCACTGGGGTGTGTCCCCTGACAGCTATGATACCTGGGTGTCAGCCAGCGAGGTGGATGGGGACGTGGAGGACCCCCCCAACACTGACAGACCATGGAAGGTCCATGCCAAGTGGGTTTTAGACACCGATGCCTTCAATGAGTGGATGAATGAAGAAGACTATGAGGTAGATGAGAACAAGAAGCCAGTCAGCTTCCGCCAGAGGATCTTCCccaaggaggaggagTCTTCCCGTACACCCGATCGCAAGGAGCGCAAGGCCAACTCTGCCAGCAAGAAGAGGAGGCGCTCGCCCTCGCCACCAAGCACTCCTGCCGAGTCCCGCAAGAAGGGAGGAAAAAAGGGGAACCCGGGGCCTCACTGGAAGCAGCGGCGGGGCCACAGAGGTGAagaggaggacacggaggaggACGTAACTAAGGACATGGACGACTCCTCAGCTGGTGCCAGCATGGAGGAGGGCAACATGTCCAAGAATGCGAATTCAAAGAAAGACAGTGAGAATACTCCAGTGAAAGGAGGGAACGGGGCAGACTTGGATGACATGGAGGACGACTCTGTGCTGTCCGGTGGAAAGgACGATGAGGAACAGAGCAAAGCTGAAATCAACCGACTGATGGACGCTAGCGAGGACAATGTGACTGAACAGACTCACCACATCATCATACCCAGCTATGGAGCTTGGTTTGACTACAACTGCATCCATGAGATTGAGAGAAGAGCCCTGCCTGAGTTCTTCAATGGAAAGAACAAGTCCAAAACTCCAGAAATATACCTGGCCTATCGCAACTTCATGATCGACACATATCGGCTAAACCCTCAGGAGTACCTCACCTCCACCTCCTGTCGCCGGAACTTGACCGGGGATGTCTGTGCCATCATGAGGGTTCATGCATTTTTGGAGCAGTGGGGTTTGGTAAACTACCAGGTCGACTCTGAGAGTCGCCCTTTGCCCATGggccccccacccacaccccaCTTCACCGTGCTGGCTGACACACCATCTGGCCTCATGCCCCTGAACCACAGACCCCCACCGATTCCCCCTCAACAGCCAATGCCCAACTTCGCCGACAAAGGCAAAGACAAGGCCATCGACCTGCAGAACTTCGGCCTTCGCAGCGACCTCTACAACAAGAAAAATCTCAAGGGTAAAGCTGCCAACTCTACCAGGGATTGGACCGAGCAGGAGACTCTACTGCTGCTGGAGGCCCTGGAGATGTTCAAAGACGACTGGAACAAAGTGTCTGAGCACATCGGTTCACGCACCCAGGACGAGTGTATCCTGCATTTCTTGCGGCTACCCATTGAGGATCCGTACATGGAGAGCACTGAGGCCTCCCTGGGCCCTCTGGCCTACCAGCCCATACCCTTCAGCCAGTCTGGAAACCCTGTCATGAGCACAGTAGCCTTCCTGGCCTCTGTGGTCGATCCCAGAGTGGCGTCTGCTGCTGCCAGGGCAGCCCTAGagGAGTTCTCCCGTGTCCGTGAGGAGGTGCCAGCTGAGTTGGTGGAGGCTCACGTGAAGAAGGTGCAGGAGGCAGCCAGGAGCACAGGAAAGGTGGACCCCGCCTTCGGCCTGGAGAGCAGTGGCATTGCTGGCACCGCCCCTGAGGAACCAGAAAAGACCGAAACCCCAGAGGCAGAGAAGATAGACACGGACACAGATTCCCAACAGGCTGATAAGGCGGAGTTAAAGGACGAGGCAGAGAAGCCCAGCGAGTCTGCGGAGAAGAGCGACAAGACAGAGGCCACAGAAAAGGTGAAGGAGGGATCCGAGGCGTCGGAGCGTGATGAGGAGAGtgaagagggaggggaggcCAAAACGGCTTCAGacaaagacaaagaggagGCTATGGAGACGTCGTCCTCAGAACAGGAAAAGGATAAGGAGGAGAAGGCAGCTACAGAGGAGGGAGATGAAAAGAGGAAGAAACTGGAGCATGACATTGGAGAGGGGAACATTGCCACCGCAGCTGCTGCTGCCCTGGCATCTGCTGCCACCAAGGCCAAGCACTTGGCGGCggtggaggagaggaagatcaagTCCCTGGTGGCTCTGCTGGTGGAGACCCAGATGAAGAAGTTGGAGATCAAGCTGAGGCACTTTGAGGAGCTCGAGACCATCATGGACCGAGAGAAAGAGGCTTTGGAGCTTCAGCGACAGCAGCTGCTCACTGAGCGACAGGCGTTCCACATGGAGCAGCTTAAATATGCCGAGATGAAGGCGAGGCAGCAGATGGAGCAGCAAGCCGCCGCCGCGGCTGCCGCTGCTGCCCAGGCTCAAGGACAGGGGCAGGCTCCTGGATCTGCACCCAACTCGGGGCCCCCTCCATCAGGCATGCACCCTGGAGGGCCCCCACCACACCACGGTGCCCCAGTGCCCTACCACGGAGGGCCTCCACCCGGTGCTGCCATGCACCCAGGCTACCCTCCGATGGGTCACCACCCCATGGCCCCTCACCACCCAggacagacagGACCAATGGGACCAGGCCAGCCCATACCGGGACGTATGATGCCTGGCCCACCCTCTGCCGCACCCCCTCCTGGCGGCATGCCTCCTATGATGCCCCCACGTCACCCTGGAGCACCCAACGGCATGTACCCTGGCCCACAACCTGCACAGCCTGAAGCGGTACCTCAAGTTCCTGTGGGTCCTCCAGCGCCCGCGAGTGGCAGAGTGGCTGAAAACTAAGACCTAcgttcacaaacacacacaaaagcgcacacacacacacacacacacacacacacacacacacacacaaaactaactATCTCTGAACCCCTTTTTGATGGCCTTTGCTACTGGCTCGGTATATTTCCCTCAACACTCAAAACTACCATCAACTTTATCACAggtcacacacacccacatacacactcagGGTCTCTCAGTGGCAAGGGTAACCCAAttatccacacacacatccagactTCCTCTCAGGGCACAGCGCAAGGGTCGTCGTAGTAATAAACACTGTTTTCTGCTCTGTTGGGCCAAATGGAGGTTGGAGAGAATGGACTGTGTATGGAAAACAAAACCAGGAGAgagaatgattaaaaaaaaaaaaaaaactttcttacctttttcttttttcaatgcTGTTTTGACACTCTAATCCCCCCCTCTCCCATCTCTCTTTAAAACACACACCTCCTTATGTCTGGTGCCCCCTTTTGCAAGCCAAACACTAGGGGGAGCTAGTGAGAGCAGAAGGCCAGTCAGACATGCAGGGTGGTGAGTGTGTGCTGAGCAACCTCAGCGGTAACACACACGTTACTCAGATTATGATATGActaaatctcacacacacacacagaggggggGCCAGCCTACCCTCGCTCTTGTCTTGTTGAGTATCTACCTCTCGcccttttttaaatgatacaCTGTAgttctgtgtgtgggtgtgtgtctgtgaaagtgtgtttcatGGCCCTTCACGCGTCTGCCACCTCTGACCAAAGTTTGTGCCACTTGTGTAATCTTTGCTTTTCCATTTGAGACTTTTGCAATAATGAGTTGAGATACAGACATAAGATACTCTTTGGTCAATAAAGTACAAGTTGGACAAACGAGGCAGGTTTatggataaaaaaaactaaactaaacttgtTTTTTAAGACCTGTTAATAGTTATTAAAGGTTCTTCTTTCTTGCCGCCACAAAAAAGTAGTTTTTAAGTAGTAGTTTGACAAGATACGTCTCCGTTCCCATTCCAACCCAAACCAAGATGGCGACTGGAAAGTTTTTCGTCACTACGGAGTGGAGTTTGAAGATTATCTGCCAAAATGCATCAATTCATGTCTACTTTTTGACTTTCTTGGCTGACTTCAAAAGGATATGATTGACTTTATTGGGTTTATCAACAAaccccatgaaaagaccaaaacaaacaatGCATTAGACTGACTCTGATtactttctgacttccctaCTCAGTCTGTAGCTCTCAACCCCATGCCCGTTGGTTCCCACTGAAGGCTCAGTAGTTTgccactgtagtttttagcaaatcCTACTCAAACGGGAGTAAACAAAGCCTTcgttggggactatttttagCAGTGGATTAATCAACATTTGTTGCTCTAATGTTGAATTTCctcaaaataaatgtgtttgtggGAAACAAGGAACATGTCAGCCAGTGCAAAAATCTGGCCCATCCATGTGtttaaatagtttttggacaacaatggagttctatggcacagaggaaccAATTCATGGTTGCTTTTGGTTCTGATGAAAGCAGTTTTGCTCGATACGTCACCACCTAGGTACAGTTAATAAATGGATCATTGGAGCCCTGCAGTGTGCGagctatttatttctgttacttcATATGTTTTTGCTCATTTTTGGCTCAGCACCTGTCGTCCTTGGTTTGGATGTGCGACCATAAGGAAAATGTACTGTATCACCAGACGTAtcttttaaacattaaagcataAGTCTCAGATCTGATTACTCGCGAGACACAAGGCGATGCTCGGTCAGAGACTATTAGAGGACAGACGGCTAAACACACAATCGTTCCCTCTGCCCCACACTAACCACagtactgtaacacacacacacacacacacacacagagatagaaaTGTAAGCTAAGCTGAGGCTCACACTGGAGGCTGCATGCGTACACTGACTTGGCCGGACCCTGCCCGCAACGCACtggacaaccacacacacagatacatgaacacgcacacatatacatTTAATCTCCTGCTGACCTTCCCACAGCCTTTACAGAGAGGGAGACGCTGTGATATGGCTCGACTGAGACATCAGAACATGAATGACGCTCTTCCTCAGCGCGGTGGGCTTCTAGATGTTTTTAGGTGCTGATACTGTAGCGAATAAACCCcgccaccctcctcctcctctgctcacGCCTAGTGCTGCCTACCTCGCTAGCCCCGCCTCACGCACAAAAACTGTTTTGCTTTTATGGCCACCAGCCACGGGAAAACTAAAGCAATATCCTCATTCCTGTGTATCAACCTATTTGTGGTCGGCACACAGAGAAATACGGCTCTGCCGACGAGAAGCAATCATGATTTCACAATTTGGTCCTCATTTCTGTCCTGTGGTGTCGTACATAAAGAGCTGCGTAAACAAGGGGAACAACCacccaacatttatttatagagctGAAATTACAGGCAATTGATTAGTCAATCCACAGGAAATTAATTGAGAACAATTTTGtgatttgtcatttttcaagcaaaaataacaacgttctctggttccagcttttcAGATGTGAATTTTTGGtgattttctttgtcttatatgATGATTAATTGAATATCTATAGACGTATATAATAGACATCACCTTGAGCTTCAGGAGTTTGTAAGAGGTGCATTTTTACCATCtcctgacattttattgactgaaataatctgccctgttcttttcattatcaataaattatttaatcGTGAGATTTAAAGCTGTACTCGGCAGATATTTGGTAATTTTGCTTGGTAATCGGTTACCTAGATTTCCTGTTGACTAATTGGTTAATGCGATTGAAAAGCTCATTCTTGACCCCCTGCCAAGAAGCAGTCTCATTCTTACTATTGTATCACACAATATTCCTCAGCAGTTGTTACGATGTTTTAGATGTTCAAATTTCCGTTGTTTTCTGCACATTTTAACGACTTTGCATTTTGGCTTTAAAGTTTAGACTGAAAGTTCCTTCTCAACCTCGGAATCCGCAGTTGGCTCAACAATCTCGCCAGAAGATCAATTTGTAGCCGTTGAGCAGCTTTTGGTCGTATTACAATCTTCCTCGGCAGATGAGGTTGCCCAGTTGTCGTGGGAATCCCTAAAATGCTCAAAATAGATTTGGACAGCTACAATTCCACGACAAGTGCTTGAGGAATACCATGTATTGCAATCAAAAGCTCTAAAACCGCTAATACAGGACCACGCGACGAGACTGTTTAGCCAACTACTCGATTGTTTTCATCCCTACACGAATAGAAAAGAAACGGTGACGTGACTTAGCTTTCTACATTTTCCATTTAAGTCTTTGAGTTGACCGTGCATGTTGGCTTGAAATAAAGGTAAACTAATACTGACAATAGGAAAATGAGTAAGCTAAACTCAAGTGGCTCCTGCTCACTCTACTAAATTCCTCAGAAACTGAACGGATATGGCGCGCTGCATCGCTCTTCAGTCGACACAAAGGTTGATAATAagctaaaagtttttttttaatgtgaagTTTTAACTGAAATTACTTCTCTCCCCCCTTCGCTAGCACTCTCTGCTACCTCTTCCTCGTCCATCCGCTAGCTACCTCTTCTAGAAATCTTCCTCTCGCTATCTGCTACCTCTCTGCGCACCCCTTCGCTACCTCTCGTTcccatttccttttctttttatgcctattttttttttttcctgcccaCGTGACTGCTTCATCACTGATCGTTGCCCTCTTCTACCAGTCTGATGGAAGAAGAAAACCTACGTACAGTCGTTCACTCTTGCTCTCATTCACCGCGCCCTCCTTTCCCATTCAACATCTTTTACAGGCTTGTTATGTAATATCACTTAAATATGACGGGAATCCCCTTCACATATATTATCTTTAATCGATACTTTTTTGTGTTGATGGTATGTATTTTTAAGGAGACGTTTTGTGTAGATGGAAGTTATGTTATTTGAAAGTTTGtagcattttgttttttcttttgtatgGGGGTCTGTTGGTACTTGGACCTAGACACTGTCAAATAAACTGTTTTGTATGAG
>XM_039805629.1
CATTCGAAAACTTGCACGGTGAGCGACGCCGTGGAGGAGAAAGACAACGCAGCgaacaaaacacacaatggCGACGGCGGCGACAACGGCAGGCGGAACGGGCTCAGGCGGACCGGCCACCGGTCCGGTCGGCGGCGGGACCGCAGTGGGACGAAAGAAGGACGGTGGTCCTTCCACGAAATTCTGGGAAAGCTCAGAGACGATTTCCCAGTTCGAGACGGTGCGGCAGTGGATCGGAAAGCACTACAAGAAgTATGTCCAGAATGACTCCCCCTCCAGTAAATCCTTGGCGGGCCTGGTGGTCCAGCTGCTGCAGTTCCAGGAGGATGCATTTGGACGCAGGGTCAACAATCCTGCCCTTACCAAGTTACCTGCCAAGTGTTTCCTGGATTTCAAGGCAGGAGGTGCTCTCTGTCACATCTTGGGTTCGGTCTACAAGTTTAAGAGCGAGCAGGGGTGGCGTAGATTTGACCTGCAGAATCCTTCCCGGATGGACAGGAACGTGGAAATGTTCTTAAATGTAGAGAAGAACTTGGTCCAGAACAACTGCTTGACTCGACCCACTGTCTTCCTGTCACCGGACGTTGAGCAGAAACAAGCCAGTAAGCTCAAAGACATCATCAAAAGGCACCAGGGCTCCATTACTGATGACAAGTCAAAGGCCACCCACCACATCTACCCCTCTCCAGCCCAACATGAAGAAGaggAATGGCTTCGCCCTGTCATGAAGAAAGACAAGCAGGTGCTGGTTCACTGGGGTGTGTCCCCTGACAGCTATGATACCTGGGTGTCAGCCAGCGAGGTGGATGGGGACGTGGAGGACCCCCCCAACACTGACAGACCATGGAAGGTCCATGCCAAGTGGGTTTTAGACACCGATGCCTTCAATGAGTGGATGAATGAAGAAGACTATGAGGTAGATGAGAACAAGAAGCCAGTCAGCTTCCGCCAGAGGATCTTCCccaaggaggaggagGAGCGCAAGGCCAACTCTGCCAGCAAGAAGAGGAGGCGCTCGCCCTCGCCACCAAGCACTCCTGCCGAGTCCCGCAAGAAGGGAGGAAAAAAGGGGAACCCGGGGCCTCACTGGAAGCAGCGGCGGGGCCACAGAGGTGAagaggaggacacggaggaggACGTAACTAAGGACATGGACGACTCCTCAGCTGGTGCCAGCATGGAGGAGGGCAACATGTCCAAGAATGCGAATTCAAAGAAAGACAGTGAGAATACTCCAGTGAAAGGAGGGAACGGGGCAGACTTGGATGACATGGAGGACGACTCTGTGCTGTCCGGTGGAAAGgACGATGAGGAACAGAGCAAAGCTGAAATCAACCGACTGATGGACGCTAGCGAGGACAATGTGACTGAACAGACTCACCACATCATCATACCCAGCTATGGAGCTTGGTTTGACTACAACTGCATCCATGAGATTGAGAGAAGAGCCCTGCCTGAGTTCTTCAATGGAAAGAACAAGTCCAAAACTCCAGAAATATACCTGGCCTATCGCAACTTCATGATCGACACATATCGGCTAAACCCTCAGGAGTACCTCACCTCCACCTCCTGTCGCCGGAACTTGACCGGGGATGTCTGTGCCATCATGAGGGTTCATGCATTTTTGGAGCAGTGGGGTTTGGTAAACTACCAGGTCGACTCTGAGAGTCGCCCTTTGCCCATGggccccccacccacaccccaCTTCACCGTGCTGGCTGACACACCATCTGGCCTCATGCCCCTGAACCACAGACCCCCACCGATTCCCCCTCAACAGCCAATGCCCAACTTCGCCGACAAAGGCAAAGACAAGGCCATCGACCTGCAGAACTTCGGCCTTCGCAGCGACCTCTACAACAAGAAAAATCTCAAGGGTAAAGCTGCCAACTCTACCAGGGATTGGACCGAGCAGGAGACTCTACTGCTGCTGGAGGCCCTGGAGATGTTCAAAGACGACTGGAACAAAGTGTCTGAGCACATCGGTTCACGCACCCAGGACGAGTGTATCCTGCATTTCTTGCGGCTACCCATTGAGGATCCGTACATGGAGAGCACTGAGGCCTCCCTGGGCCCTCTGGCCTACCAGCCCATACCCTTCAGCCAGTCTGGAAACCCTGTCATGAGCACAGTAGCCTTCCTGGCCTCTGTGGTCGATCCCAGAGTGGCGTCTGCTGCTGCCAGGGCAGCCCTAGagGAGTTCTCCCGTGTCCGTGAGGAGGTGCCAGCTGAGTTGGTGGAGGCTCACGTGAAGAAGGTGCAGGAGGCAGCCAGGAGCACAGGAAAGGTGGACCCCGCCTTCGGCCTGGAGAGCAGTGGCATTGCTGGCACCGCCCCTGAGGAACCAGAAAAGACCGAAACCCCAGAGGCAGAGAAGATAGACACGGACACAGATTCCCAACAGGCTGATAAGGCGGAGTTAAAGGACGAGGCAGAGAAGCCCAGCGAGTCTGCGGAGAAGAGCGACAAGACAGAGGCCACAGAAAAGGTGAAGGAGGGATCCGAGGCGTCGGAGCGTGATGAGGAGAGtgaagagggaggggaggcCAAAACGGCTTCAGacaaagacaaagaggagGCTATGGAGACGTCGTCCTCAGAACAGGAAAAGGATAAGGAGGAGAAGGCAGCTACAGAGGAGGGAGATGAAAAGAGGAAGAAACTGGAGCATGACATTGGAGAGGGGAACATTGCCACCGCAGCTGCTGCTGCCCTGGCATCTGCTGCCACCAAGGCCAAGCACTTGGCGGCggtggaggagaggaagatcaagTCCCTGGTGGCTCTGCTGGTGGAGACCCAGATGAAGAAGTTGGAGATCAAGCTGAGGCACTTTGAGGAGCTCGAGACCATCATGGACCGAGAGAAAGAGGCTTTGGAGCTTCAGCGACAGCAGCTGCTCACTGAGCGACAGGCGTTCCACATGGAGCAGCTTAAATATGCCGAGATGAAGGCGAGGCAGCAGATGGAGCAGCAAGCCGCCGCCGCGGCTGCCGCTGCTGCCCAGGCTCAAGGACAGGGGCAGGCTCCTGGATCTGCACCCAACTCGGGGCCCCCTCCATCAGGCATGCACCCTGGAGGGCCCCCACCACACCACGGTGCCCCAGTGCCCTACCACGGAGGGCCTCCACCCGGTGCTGCCATGCACCCAGGCTACCCTCCGATGGGTCACCACCCCATGGCCCCTCACCACCCAggacagacagGACCAATGGGACCAGGCCAGCCCATACCGGGACGTATGATGCCTGGCCCACCCTCTGCCGCACCCCCTCCTGGCGGCATGCCTCCTATGATGCCCCCACGTCACCCTGGAGCACCCAACGGCATGTACCCTGGCCCACAACCTGCACAGCCTGAAGCGGTACCTCAAGTTCCTGTGGGTCCTCCAGCGCCCGCGAGTGGCAGAGTGGCTGAAAACTAAGACCTAcgttcacaaacacacacaaaagcgcacacacacacacacacacacacacacacacacacacacacaaaactaactATCTCTGAACCCCTTTTTGATGGCCTTTGCTACTGGCTCGGTATATTTCCCTCAACACTCAAAACTACCATCAACTTTATCACAggtcacacacacccacatacacactcagGGTCTCTCAGTGGCAAGGGTAACCCAAttatccacacacacatccagactTCCTCTCAGGGCACAGCGCAAGGGTCGTCGTAGTAATAAACACTGTTTTCTGCTCTGTTGGGCCAAATGGAGGTTGGAGAGAATGGACTGTGTATGGAAAACAAAACCAGGAGAgagaatgattaaaaaaaaaaaaaaaactttcttacctttttcttttttcaatgcTGTTTTGACACTCTAATCCCCCCCTCTCCCATCTCTCTTTAAAACACACACCTCCTTATGTCTGGTGCCCCCTTTTGCAAGCCAAACACTAGGGGGAGCTAGTGAGAGCAGAAGGCCAGTCAGACATGCAGGGTGGTGAGTGTGTGCTGAGCAACCTCAGCGGTAACACACACGTTACTCAGATTATGATATGActaaatctcacacacacacacagaggggggGCCAGCCTACCCTCGCTCTTGTCTTGTTGAGTATCTACCTCTCGcccttttttaaatgatacaCTGTAgttctgtgtgtgggtgtgtgtctgtgaaagtgtgtttcatGGCCCTTCACGCGTCTGCCACCTCTGACCAAAGTTTGTGCCACTTGTGTAATCTTTGCTTTTCCATTTGAGACTTTTGCAATAATGAGTTGAGATACAGACATAAGATACTCTTTGGTCAATAAAGTACAAGTTGGACAAACGAGGCAGGTTTatggataaaaaaaactaaactaaacttgtTTTTTAAGACCTGTTAATAGTTATTAAAGGTTCTTCTTTCTTGCCGCCACAAAAAAGTAGTTTTTAAGTAGTAGTTTGACAAGATACGTCTCCGTTCCCATTCCAACCCAAACCAAGATGGCGACTGGAAAGTTTTTCGTCACTACGGAGTGGAGTTTGAAGATTATCTGCCAAAATGCATCAATTCATGTCTACTTTTTGACTTTCTTGGCTGACTTCAAAAGGATATGATTGACTTTATTGGGTTTATCAACAAaccccatgaaaagaccaaaacaaacaatGCATTAGACTGACTCTGATtactttctgacttccctaCTCAGTCTGTAGCTCTCAACCCCATGCCCGTTGGTTCCCACTGAAGGCTCAGTAGTTTgccactgtagtttttagcaaatcCTACTCAAACGGGAGTAAACAAAGCCTTcgttggggactatttttagCAGTGGATTAATCAACATTTGTTGCTCTAATGTTGAATTTCctcaaaataaatgtgtttgtggGAAACAAGGAACATGTCAGCCAGTGCAAAAATCTGGCCCATCCATGTGtttaaatagtttttggacaacaatggagttctatggcacagaggaaccAATTCATGGTTGCTTTTGGTTCTGATGAAAGCAGTTTTGCTCGATACGTCACCACCTAGGTACAGTTAATAAATGGATCATTGGAGCCCTGCAGTGTGCGagctatttatttctgttacttcATATGTTTTTGCTCATTTTTGGCTCAGCACCTGTCGTCCTTGGTTTGGATGTGCGACCATAAGGAAAATGTACTGTATCACCAGACGTAtcttttaaacattaaagcataAGTCTCAGATCTGATTACTCGCGAGACACAAGGCGATGCTCGGTCAGAGACTATTAGAGGACAGACGGCTAAACACACAATCGTTCCCTCTGCCCCACACTAACCACagtactgtaacacacacacacacacacacacacagagatagaaaTGTAAGCTAAGCTGAGGCTCACACTGGAGGCTGCATGCGTACACTGACTTGGCCGGACCCTGCCCGCAACGCACtggacaaccacacacacagatacatgaacacgcacacatatacatTTAATCTCCTGCTGACCTTCCCACAGCCTTTACAGAGAGGGAGACGCTGTGATATGGCTCGACTGAGACATCAGAACATGAATGACGCTCTTCCTCAGCGCGGTGGGCTTCTAGATGTTTTTAGGTGCTGATACTGTAGCGAATAAACCCcgccaccctcctcctcctctgctcacGCCTAGTGCTGCCTACCTCGCTAGCCCCGCCTCACGCACAAAAACTGTTTTGCTTTTATGGCCACCAGCCACGGGAAAACTAAAGCAATATCCTCATTCCTGTGTATCAACCTATTTGTGGTCGGCACACAGAGAAATACGGCTCTGCCGACGAGAAGCAATCATGATTTCACAATTTGGTCCTCATTTCTGTCCTGTGGTGTCGTACATAAAGAGCTGCGTAAACAAGGGGAACAACCacccaacatttatttatagagctGAAATTACAGGCAATTGATTAGTCAATCCACAGGAAATTAATTGAGAACAATTTTGtgatttgtcatttttcaagcaaaaataacaacgttctctggttccagcttttcAGATGTGAATTTTTGGtgattttctttgtcttatatgATGATTAATTGAATATCTATAGACGTATATAATAGACATCACCTTGAGCTTCAGGAGTTTGTAAGAGGTGCATTTTTACCATCtcctgacattttattgactgaaataatctgccctgttcttttcattatcaataaattatttaatcGTGAGATTTAAAGCTGTACTCGGCAGATATTTGGTAATTTTGCTTGGTAATCGGTTACCTAGATTTCCTGTTGACTAATTGGTTAATGCGATTGAAAAGCTCATTCTTGACCCCCTGCCAAGAAGCAGTCTCATTCTTACTATTGTATCACACAATATTCCTCAGCAGTTGTTACGATGTTTTAGATGTTCAAATTTCCGTTGTTTTCTGCACATTTTAACGACTTTGCATTTTGGCTTTAAAGTTTAGACTGAAAGTTCCTTCTCAACCTCGGAATCCGCAGTTGGCTCAACAATCTCGCCAGAAGATCAATTTGTAGCCGTTGAGCAGCTTTTGGTCGTATTACAATCTTCCTCGGCAGATGAGGTTGCCCAGTTGTCGTGGGAATCCCTAAAATGCTCAAAATAGATTTGGACAGCTACAATTCCACGACAAGTGCTTGAGGAATACCATGTATTGCAATCAAAAGCTCTAAAACCGCTAATACAGGACCACGCGACGAGACTGTTTAGCCAACTACTCGATTGTTTTCATCCCTACACGAATAGAAAAGAAACGGTGACGTGACTTAGCTTTCTACATTTTCCATTTAAGTCTTTGAGTTGACCGTGCATGTTGGCTTGAAATAAAGGTAAACTAATACTGACAATAGGAAAATGAGTAAGCTAAACTCAAGTGGCTCCTGCTCACTCTACTAAATTCCTCAGAAACTGAACGGATATGGCGCGCTGCATCGCTCTTCAGTCGACACAAAGGTTGATAATAagctaaaagtttttttttaatgtgaagTTTTAACTGAAATTACTTCTCTCCCCCCTTCGCTAGCACTCTCTGCTACCTCTTCCTCGTCCATCCGCTAGCTACCTCTTCTAGAAATCTTCCTCTCGCTATCTGCTACCTCTCTGCGCACCCCTTCGCTACCTCTCGTTcccatttccttttctttttatgcctattttttttttttcctgcccaCGTGACTGCTTCATCACTGATCGTTGCCCTCTTCTACCAGTCTGATGGAAGAAGAAAACCTACGTACAGTCGTTCACTCTTGCTCTCATTCACCGCGCCCTCCTTTCCCATTCAACATCTTTTACAGGCTTGTTATGTAATATCACTTAAATATGACGGGAATCCCCTTCACATATATTATCTTTAATCGATACTTTTTTGTGTTGATGGTATGTATTTTTAAGGAGACGTTTTGTGTAGATGGAAGTTATGTTATTTGAAAGTTTGtagcattttgttttttcttttgtatgGGGGTCTGTTGGTACTTGGACCTAGACACTGTCAAATAAACTGTTTTGTATGAG

Function

symbol description
smarcc1 Enables protein N-terminus binding activity. Contributes to nucleosomal DNA binding activity. Involved in chromatin remodeling; nucleosome disassembly; and positive regulation of transcription, DNA-templated. Located in cytoplasm and nucleoplasm. Part of SWI/SNF complex. Biomarker of renal cell carcinoma.

NR:

description
SWI/SNF complex subunit SMARCC1-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003682 chromatin binding molecular_function

KEGG:

id description
K11649 SMARCC; SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805628.1 True 7540 mRNA 0.49 28 32166319 32193048
XM_039805629.1 False 7516 mRNA 0.49 28 32166319 32193048

Neighbor

gene id symbol gene type direction distance location
LOC120562212 NA coding upstream 16988 32145392 ~ 32149331 (+)
dpy19l1l dpy19l1,LOC102792675 coding upstream 41942 32090158 ~ 32124377 (+)
herpud2 LOC103361314 coding upstream 206921 31949622 ~ 31959398 (+)
pkdc LOC102076377,LOC101468599,LOC102793757,LOC102209191,LOC102303972 coding upstream 218546 31943411 ~ 31947773 (+)
LOC120562640 NA coding upstream 234272 31917746 ~ 31932047 (+)
LOC120562445 NA coding downstream 11706 32204754 ~ 32212177 (+)
cspg5a cspg5,LOC103364230 coding downstream 35955 32229003 ~ 32293702 (+)
elp6 elp6,LOC102790853 coding downstream 116036 32309084 ~ 32314913 (+)
LOC120562270 scap coding downstream 121974 32315022 ~ 32374187 (+)
LOC120562193 LOC103388706 coding downstream 660309 32853357 ~ 32888350 (+)
G77722 LOC102207529,LOC102306104 non-coding upstream 26176 32138777 ~ 32140143 (+)
G77687 NA non-coding upstream 175949 31989886 ~ 31990370 (+)
G77685 NA non-coding upstream 180579 31985466 ~ 31985740 (+)
G77684 NA non-coding upstream 183603 31982468 ~ 31982716 (+)
G77683 NA non-coding upstream 183927 31980051 ~ 31982392 (+)
G77757 NA non-coding downstream 102047 32295095 ~ 32295320 (+)
G77764 NA non-coding downstream 167497 32360545 ~ 32369078 (+)
G77762 NA non-coding downstream 181649 32374697 ~ 32376913 (+)
G77776 NA non-coding downstream 260139 32453187 ~ 32453410 (+)
G77862 NA non-coding downstream 573223 32766271 ~ 32766508 (+)
G77682 tbx20 other upstream 186410 31976318 ~ 31979909 (+)
G77447 NA other upstream 1030173 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 1434710 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 1805731 30351495 ~ 30360588 (+)
G77239 NA other upstream 2041681 30123702 ~ 30124638 (+)
LOC120561717 NA other downstream 212085 32405133 ~ 32421472 (+)
G77888 NA other downstream 907365 33100413 ~ 33101534 (+)
bmper bmper other downstream 1633039 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 1701312 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 1797494 33990542 ~ 34042648 (+)

Expression


Co-expression Network