LOC120562165 (nov)


Basic Information

Item Value
gene id LOC120562165
gene name nov
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 16845953 ~ 16850232 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805707.1
TCCCGAGTCTTGAGCCAGAACGACAAAGAGATCACAACCTTCTGCTACACCACAGCCAGAGAGGAGGGACGATTCAACCCCAAACCAAAGGACTCAAATCAGCTCCAATAACGACAACTAAACACTTTTTAGACTGCAGATATTTTTGATTCTGCTCTACTTAACAGGAAGATGACCAATCTGTCACAGAGAGCTCTTTTTGTCTTCTTTACAGCACAGgTGTTTACTCAAGTCTGGTCACAGGTGTGTCCTCGGAGATGCCAGTGCCCTAAGGAGCCCCCCATGTGTCTCCCTGGGGTGCCTTTGATCCTGGATGACTGCGCCTGCTGCCTGGTGTGTGCCCGTCAGAAAGGGCAGGTCTGCTCTGAAGCGAATCCCTGTGACACACGCAAAGGGCTGCAATGTGAATACACCGCTGACGTCCACAAGAGGACTGGTATCTGTGCCGCTCATGAaggagatgtgtgtgttttggacgGTTCTGTCTATCAGAACGGCCAGACCTTCTTTCCCAGCTGTAAGTACCAGTGTATGTGCCGTGATGGGCAGATCGCCTGTGTGCCGCGCTGCACCGTGGATGTGATGCTGCCCGGGCCGGACTGCCCCATGCCACGCAGGGTCCTGGTGCCTGGAGAGTGCTGCGAGAAGTGGGTGTGTGAGCCCCAGGGCGAGGCCAGTGCACTGGGCGGCTTTGCCATGGCGGCCTATCGTCAGGAGGAAACAGTGAGATTTGACAACTGGGACCCTAGCCTGAACTGCATTGAGCAGACCACAGAGTGGGGCGCCTGCTCTCAAACCTGCGGCATGGGGGTGTCCACCAGGGTCACTAATAAGAATCGCCGGTGTGAGATGATGAAGCAGAGCCGACTGTGTATGATCAGACCCTGTGACGACCAGCAGGACCAGACGCAGCTCACACAGCTTGCACCGAAGCGAGGCAGTAAGTGTCAGAGGATGGTGAGGAGCGACACAACCGTCCACCTCTCCTATAAGAACTGCACCAGCGTCCAGGCCTACAAGCCTCGCTACTGTGGCTCCTGCACAGACGGCCGCTGCTGTACCCCCCACAGAACCAAGACTGCTGTGGTGGAGTTCCAGTGTGCCAACGGTAAAACCACCAGGAAACCAGTCATGGCCATCCTGACTTGTGCCTGCCACAGCCATTGCCCCCGAGACAATGCTGTGTGGCAGCCATCAGAGCTGGGATACAGTGGTTATAGGTCATAAAGTCACTCTTGAGGTCCAAGAGCATTCTCTTTacttaaaaaacataaaaacatgagtTGCATTGACTCAAAATTTTAGATTAAAACAAGACTGTCTGCGACATATCCACAgtgaaaataatgtctgctTATTATGGTTCAGAATCATACTTGTATTCGTAAAATGAGAATCCTCTTTTCTTGTTGAGATCGTAGAGAACTAAAtagctctctatctctctctcctggaGAGCGATTTAGTTTTGTAACATCCTGTGGACAAATAAGTGTCATCTTCACTATGTTAAGTAGAATCAAAGCACTTAAACCTTGTGATATATTGATTCTCTCCATCCAACCATTCACAACAGACGGTTGGACAGTTGTCTGTAGGTGCTCTTACATTGTGAAGGTCAACATAAAACAGCCTCTTTTCAAGAGGTCAAATAGTATGAAGGTGTACAGTTACAGGGTAGTGCAGATATACAGGATAGTCATGGTTGCTTGAAGCCTTCCAACCGGACTGTTTGATTGACAGTCAGGTCGGCCAATCAGGAAACAAGACAAAGAGCAAGAAACCACAGTTGGgttttttaaaagcttcagCAATGTAAAGGAGCAAGTAGGTCCTCTTTCAGAATGAATTAAAACACCTACTGTACTCTGACACTTTGACACCTTAATctagaaaaaaaactataataaGAATACTGCAATCCCATTACTTTcacattgataaaaaaaaaagaagaaagagaagcatGAGGGAAAGAAAGGATTATAGGGTGAGCTGTTACCTTTTAGTGGCACTGCCATGGACATGTTTCAACTATGggacacattttttaaataactggACTGTGTGCTTTGACCTGGTCCAAACCAAGGGCTCAACCTATGAAAGAGAGGTCACTGTAGTGACTTAGTGTCATTTCTAACATCCGCCTGAAATCTAACTCCCGTTGTAAAATGTGTAATGTCTATGTTCTCGTCAATAAATGCaaatgtatgttgttgtttttttaggtaTAGAAGGGATTTTATTTGTTGAAGGTAGTGCACATAACAGCTATTTTTATAATGACAAAAGTTTTGTAAATACTTGCTGTATAGCTTGTTTGACTGAGTGTGTATCAAATACACAGCTTTAATTGGTAACGATGTAAACATGAATTGTATATGTTGATATGTGGTATTGTTTTGCTTACTACTTGAATTATACTTCACACTGCTTGTTGTAGCTGTCTAAATAATAATGCAAAACTCAacataaatgtgtatttttttgta

Function

symbol description
nov insulin-like growth factor-binding protein 9

NR:

description
PREDICTED: protein NOV isoform X1

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K23571 NOV, CCN3, IGFBP9; insulin-like growth factor-binding protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805707.1 True 2495 mRNA 0.45 5 16845953 16850232

Neighbor

gene id symbol gene type direction distance location
LOC120563118 scgn,LOC103369094,LOC103151166,LOC106960462 coding upstream 14790 16816442 ~ 16831163 (+)
LOC120562315 NA coding upstream 29696 16732632 ~ 16816257 (+)
LOC120562939 NA coding upstream 116605 16726348 ~ 16729348 (+)
LOC120562690 NA coding upstream 121397 16721636 ~ 16724556 (+)
LOC120562688 tnfrsf11b,LOC103369092 coding upstream 127429 16632876 ~ 16718524 (+)
sntb1 sntb1 coding downstream 7791 16858023 ~ 16897965 (+)
LOC120561714 NA coding downstream 134379 16984611 ~ 16990597 (+)
LOC120561713 ptk2 coding downstream 145077 16995309 ~ 17065077 (+)
mrs2 mrs2,LOC105917271 coding downstream 229175 17079407 ~ 17093876 (+)
LOC120562623 NA coding downstream 244824 17095056 ~ 17107677 (+)
G72852 NA non-coding upstream 114909 16730837 ~ 16731044 (+)
G72801 NA non-coding upstream 351378 16494237 ~ 16494575 (+)
G72798 e2f3 non-coding upstream 355572 16489593 ~ 16490381 (+)
G72797 NA non-coding upstream 360034 16485713 ~ 16485919 (+)
G72796 NA non-coding upstream 363455 16482255 ~ 16482498 (+)
G72859 NA non-coding downstream 109556 16959788 ~ 16962840 (+)
G72879 NA non-coding downstream 141484 16991716 ~ 16991989 (+)
G72862 NA non-coding downstream 215357 17065589 ~ 17065911 (+)
trnar-acg_16 NA non-coding downstream 518471 17368703 ~ 17368775 (+)
G73019 NA non-coding downstream 542036 17392268 ~ 17403627 (+)
G72750 LOC104952694,LOC106925895 other upstream 773752 16018359 ~ 16072201 (+)
irx4a LOC103360443,LOC102233360,LOC103478376,LOC108232226,LOC101474805,LOC102784018,LOC102295185,LOC102202030,LOC104961814,LOC103145173 other upstream 1285661 15553464 ~ 15560292 (+)
LOC120561718 LOC107101581 other upstream 2213232 14626478 ~ 14632721 (+)
G72506 NA other upstream 2419773 14425794 ~ 14426180 (+)
LOC120562174 rbms3,LOC101066789,LOC103370884 other upstream 2475862 14175817 ~ 14370091 (+)
G73031 LOC103366415 other downstream 599353 17449585 ~ 17452568 (+)
ubxn11 NA other downstream 606411 17456643 ~ 17461118 (+)
G73123 phactr4 other downstream 795281 17645513 ~ 17647186 (+)
paqr7b LOC107588505,LOC104938075,LOC103388542 other downstream 900698 17750930 ~ 17779130 (+)
kcnn4 kcnn4,LOC104953880,LOC100704922 other downstream 1548824 18399056 ~ 18420721 (+)

Expression


Co-expression Network