LOC120562168 (zadh2,LOC102799231)


Basic Information

Item Value
gene id LOC120562168
gene name zadh2,LOC102799231
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 11970877 ~ 11975946 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805711.1
ctccttctccctttgcttaaaaaaaataaaaaaaatcccaaaccTCCGACAAAAGAAAAGGAGCCTTTCGGAACTTCTCGGGAGATCAACTAAAACCAAACTTATATAGTATCGCAAACCACAACAACTAATGTAAGCTTGCTACAACTTAAATGTCATCTTTAGCTTATAAAAGCGTGCCACTGACGCGGGTTATAGGGTTCGGCGGTCCAGTATGTTGCAGTGTACATGGTTTTGAATAGCCTAGAATAGATTtgctttcagaaaaaaaaaaaatcacagtcaGATGACAATAAGATGATAACACGTCTACGTGAAAGAGTGAAAGCGGACTGGAATGCAAACAAACCCACTCCCAAAATCGCGGATACACGCTTTGGTTACAGGTGTACGTGTTTCGGCAGCAGCCTCATCCCTCCGAATAAACAAATGCGAAATAAACGGGAGCGCAAAGTGCGCAACGCGCcgtgtgatttatttattttttgtagtgTTTTGTAGACGTTTGAAGAGATCCAGCGGGGTTGGTGTTGGTTTCGTGGGAGGAAAACGTTTGAGGATAGATGTTAGGCGAGGATTGATTTGTTTCACCTTACTAGGAAGTGAGTGTTGTGTCCGGGAAGGGGAGGGACTCCGACAACAAGTCTGGGGCGCTGCTGCGCTGCTTTCCAACGCTGCGCCAGCGCAACGTTTTGTTGCTAAATACTGGACCCAGTGGCTTGTTGTTTTTGCTTAACAAACACGCTGCACGcttcttcttttatttaaagtttggtTTAAAAGCGCGTTTTGCACGGCTCTGCCCGGACCGGCTTGGCCTTGCCTGGCCTGGCCTGCATGTGCAGAGGAGGTGGGGAGCCTACAGCGCAGGCTAACGGCAGCCGGGGCTTACTGCTGCCACCCACGTATGTCAAGTTGTCCGTGAACTTTGGACCCATTTGGGGGCCATCATGTcgagcctgctgctgctgaggaaCGGCCGGAGAGCGGTGCCGGTAATCCGCGGCGGGCGCACAGCAACCGGAGCACTTTCAGGAGTTCATCCGGTCGCGCGGCGCTTCATCATAGATATGTCCTACTCCGCGCACTTCATGGATTTTAACGGATCCTCCATACCGAGCAGTATGAAAAAGCTGGTCGTAAACAAGCTCAGTCCTAATTTCAGGGAGGCCGTTTCTACGCAAACCGTAGCGGTTCCGACACCCGGAGACGGGGACTTACTCGTCAGAAATCGTTTTGTGGGAATCAACGCCTCTGATATTAATTACTCTGCAGGCCGGTACGACCCCTCGGTAAAGCCCCCCTTCGATACCGGTTTCGAGGGTATTGGGGAGGTTGTTGGCCTTGGCCTTAGCGCCAGCTCCTCTCACACCGTCGGGGACACTGTGGCCTACTTCGGCAGCGGTGCGTTTGCCGAGTACACGGTGGTGCCAGCCAAGGAAAGCGTGCCTGTCCCCGCGGTGAAGCCAGAGTTCCTCACCCTGCTGGTCAGCGGTGCCACGGCCTACATCGCCTTGAAACGTCTGGGCGACCTGGCCAAAGGGGAGACGGTCCTGGTCACGGCGGCCGCAGGAGGAACGGGGCAGTTTGCCGTGCAGTTTGCCAAACAGGCCGGTTGCCACGTGATCGGGACCTGTTCGTCCAACGAGAAAGCCGGCTTCCTTAAATCCATCGGCTGCGACAGGCCGATCAACTACACCACAGAAGACCTGGCCAAGACGCTGAGGAAAGAGTACCCGCAAGGCATAGACGTGGTGTACGAGTCAGTTGGAGGCAGCGTCTTCGAACTCGCAGTGAACAGTTTGGCCAATAAGGGCCGGCTGATAGTGATTGGCTTCATCTCGGGGTACCAGACGGCATCAGGGATCCCTGCCTTCAGAGGGGGAACACTACCGGTCAAGCTGCTCCAGAAGTCGGCCAGCATTCGGGGTTTCTTCCTGCCCCACTTCCTCAGTGACTACAGGGAGGCTCTGGGTAGCATGATGCAGATGTATGCCAAGGGGAAGCTAGTGTGTGAGGTGGATTGTGGGGATTTGGCACAGGAGGGGAGGTTCGTAGGCTTGGAGTCAGTCTTCCGAGCTGTGGACTACATGTATGCTGGGAAAAACCTGggcaaggtggtggtggaagtGGCACCACCCGCTGTTAGCAATAGTAAGCTGTGATTTATTTAACTGATTGTTAatgcactaaaaaaaaaaaaaaaaatacctgaaCTCAAATGATTGTTGCAAACGGAAAATGTAGGGCTTTATTCTTTTTGAATAGataattgtctttatttttgtaaGATGATTGATATAACAATGTAAGTAAATCTACACAATGCTTTCACGAATAAACACAATgagcacattta

Function

symbol description
zadh2 Predicted to enable 13-prostaglandin reductase activity. Predicted to be involved in negative regulation of fat cell differentiation. Predicted to be located in peroxisome.

NR:

description
prostaglandin reductase 3 isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K07119 PTGR3, ZADH2; prostaglandin reductase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805711.1 True 2359 mRNA 0.51 2 11970877 11975946

Neighbor

gene id symbol gene type direction distance location
LOC120562594 znf516 coding upstream 201952 11721116 ~ 11768925 (+)
LOC120562012 LOC103388795,LOC103359769 coding upstream 354818 11599114 ~ 11616059 (+)
LOC120561921 LOC104943362,LOC103369138 coding upstream 954295 11010980 ~ 11016582 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding upstream 968407 10961890 ~ 11002470 (+)
rspo2 rspo2 coding upstream 1241756 10662478 ~ 10729121 (+)
LOC120561949 zhx2,LOC104959811 coding downstream 451595 12427541 ~ 12455916 (+)
tbc1d31 tbc1d31 coding downstream 490003 12465949 ~ 12476564 (+)
LOC120561925 NA coding downstream 502952 12478898 ~ 12484912 (+)
mrpl32 NA coding downstream 568550 12544496 ~ 12546473 (+)
zmp:0000000930 NA coding downstream 572074 12548020 ~ 12549958 (+)
G71929 NA non-coding upstream 148943 11821640 ~ 11821934 (+)
G71921 NA non-coding upstream 198868 11706557 ~ 11772009 (+)
G71882 NA non-coding upstream 487234 11483406 ~ 11483643 (+)
G71873 NA non-coding upstream 534178 11436471 ~ 11436699 (+)
LOC120562313 NA non-coding upstream 661025 11236294 ~ 11309852 (+)
G71952 NA non-coding downstream 236064 12212010 ~ 12215147 (+)
G71953 NA non-coding downstream 240317 12216263 ~ 12216560 (+)
G71959 NA non-coding downstream 297448 12273394 ~ 12275941 (+)
G71961 NA non-coding downstream 354122 12330068 ~ 12330962 (+)
G71969 NA non-coding downstream 377064 12353010 ~ 12353491 (+)
LOC120561922 NA other upstream 260619 11708381 ~ 11710258 (+)
G71896 LOC103388795 other upstream 354635 11599037 ~ 11616242 (+)
mbpb mbp,LOC104918400 other upstream 371651 11537184 ~ 11599226 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other upstream 488454 11467345 ~ 11482423 (+)
G71743 NA other upstream 1149377 10820295 ~ 10821500 (+)
LOC120563165 scx other downstream 735656 12711602 ~ 12729226 (+)
LOC120562335 NA other downstream 784871 12760817 ~ 12773439 (+)
G72204 ctnnb1,LOC103388302 other downstream 1148988 13124934 ~ 13125897 (+)
hint3 hint3 other downstream 1269722 13245668 ~ 13250110 (+)
prelid3a prelid3a other downstream 1492265 13468211 ~ 13471516 (+)

Expression


Co-expression Network