rnf41l (LOC102792600,LOC102077802,LOC102303797,LOC101478352,LOC102199951,LOC103373185)


Basic Information

Item Value
gene id rnf41l
gene name LOC102792600,LOC102077802,LOC102303797,LOC101478352,LOC102199951,LOC103373185
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21235187 ~ 21240428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805736.1
ACTACCTTCATGAGGTGACCTCACTTCACCCCTTTAATACGTTCTCTTCTCTCTATGCTTTAACAAAGATCCTACAGTCTCTGGCTTTAATAACAACAGGAGGCGAATAAAAGCATGACAACATCTAGACGTCGgatctgaatacttttccCACCACTGAGTCTAACGGAAATGGAAGTCCATAGGATATAAAGGGACTGGGATGAGTCCAGAGCTGCCTGCCTGTGTCCTGAACCCTGGTTGTCAGGGATACCTCTCCATGGAGACACACTCCCAAAGGATGGGCTATGATCTGGAGAGGtttgtgggctatgtgaatgaGGGtcttctgtgctgtgtgtgtcgaGACGTGTTGGAGCGCCCCCTCCAGGCGCCCTGCGAACATGCCTACTGCAGCGCCTGCATCAGCAGCTGGCTGGTCCATCATCACTCCTGTCCCGAGGACAGACTCCCACTGGATTTGGGCAGTCTCAAACCACTGTACAGGTACATGCGTAATGACCTGAACCGCCTGCAGATACGTTGTGTGAATGCAGGGCAGGGTTGTGAGGTGGTCTGCTGCCTGGAGAACCTGCACACACATGAGGATGAGTGCGAGTTTGCCTTCATTTCCTGCTCTAACACAGGTTGTCCTGTGCAGGTAGAGAGGCGGGGTTTGGAGGCTCATCTGTCGGAATGTAACTTCCGCAGCAGGGAGTGTCCCAACGGCTGTGGCCACACCCTTCTCTCCATCGACCAATCACAGCATAACTGTGTAGCAGAGGAGCTGCGCACAGAAGTGGAGATGCTCAGGGCAGAGATGCTGTGTaaggtggaggaggtgaaacgAGAGATGGAGTCTCGGTTGGATTCACAGAGGAGACACATGGTGCAGAAAGAGTCGCAACTGAAGAACGACGTGGAGGAGCTCAAGGATCAGTTGTCCCGTGTGGTGTGTGACATGCGAGCCCTGTTAGGAGCAGAGCGTCTGAGAAGACAGGAGCTGGCAGAAGCAGAGCTGGAGAAGAGGGAGCTGTTGGAGCTCCTCAGAGATCTGCAGCCAACCAGGAGCCAGCATCCTGTCGAACAGGCATCCAGTGACCAGCATCAGGGAGCCCAGCAGCAAACATCTGGATGGGAGCTGACAAGACACCAGCAGAGGGAAGCATCTTTACACGCCTCCAGACTGTCACTACATTCAGCTCAGGCCATAAATATATCAGGACCACCTCTATCACCTCAGCTGGGAGAGGGGACGCGCAAGGGTGGTACCAGGAGCCTGACTCTAGACTGCATCAAGAGGAAGAGCCGGGAGGTGACGGTCATCTGAGTAGACTGGACTGGTGGCAGATTAGCCAAACCAGAAATgataaaatcattatttttgtaatatttggCTAACAGTTTAGTAATGACAATATAGTGTGTGTACAGTACGCTATGGAATGATGCGTTGTTATAGTCTGCTGTGGAACGAACCATATGTTGTTTGAAAGGTGTTTTTGTGTAATTCTACAAACTAACTTGATCTTTTGATTGTAGGTGAGAAAGTGAATAGACATCAATTTATTTTGTGGACTCACCAGTGATCATTCCTGCAAACGGATCATTGTGTAATGTCTGTTATTTTTTATCTCAGGTTTTAATTATACACAGTTACTTCAAGTGATTTTCTTGTTCTCAGGACCAAATTATTCAGTTTCCTCAGTAGTGATCCATCTGATGCAGTATTTTCTGCTTTGAAAACGTTTGTTAAATGGTTCTTGAGTGTCCTGCAAGAACTTGGTTACGCGAGAACTTCTAAAATTATTTTAAGTCTAACCTAAAATGTTGAGTCACATTGTTGACTCACAATGTGTAATATTTCACAGCTTTGTCAATCTAAGGTATGAAAAACAAAGGCATACCAAGCAAATCTTGGAGAACAGCTATGTTACAGTTTGTGTTTTGGCATCAAGACTAAAGGACTGCATGTAGCACTACCAATATGATCTCTGAAATTAATATGGTAACTTGGTGTCGCAGTTGGCAAAGGCATGTATTTTGGGTTTAACTTGTGTTGTACATTCTGCACCTTTCTGTCTcacaaatatttcattttaaccACTTTAACTCATTAAATTCAAGGAACTATTCCTAAATGGTC
>XM_039805737.1
GTTGCACTTTGATTTTTGTGGTCTGACAGATGTGTCATCTGACGTTGTGTATTCTGTAATCCAatcaggggagagagagagagagagtgtaatCCATGTTAATCCAACAtccagagagcgagagagtaaCCCAGGATAGGGTGGGTCattaagagagacagacacagttgaAAGACGGCTGTAATGTCTGAAGGCACCACAACCTTTAGCTTTATTGCTGCCTGCCTGTGTCCTGAACCCTGGTTGTCAGGGATACCTCTCCATGGAGACACACTCCCAAAGGATGGGCTATGATCTGGAGAGGtttgtgggctatgtgaatgaGGGtcttctgtgctgtgtgtgtcgaGACGTGTTGGAGCGCCCCCTCCAGGCGCCCTGCGAACATGCCTACTGCAGCGCCTGCATCAGCAGCTGGCTGGTCCATCATCACTCCTGTCCCGAGGACAGACTCCCACTGGATTTGGGCAGTCTCAAACCACTGTACAGGTACATGCGTAATGACCTGAACCGCCTGCAGATACGTTGTGTGAATGCAGGGCAGGGTTGTGAGGTGGTCTGCTGCCTGGAGAACCTGCACACACATGAGGATGAGTGCGAGTTTGCCTTCATTTCCTGCTCTAACACAGGTTGTCCTGTGCAGGTAGAGAGGCGGGGTTTGGAGGCTCATCTGTCGGAATGTAACTTCCGCAGCAGGGAGTGTCCCAACGGCTGTGGCCACACCCTTCTCTCCATCGACCAATCACAGCATAACTGTGTAGCAGAGGAGCTGCGCACAGAAGTGGAGATGCTCAGGGCAGAGATGCTGTGTaaggtggaggaggtgaaacgAGAGATGGAGTCTCGGTTGGATTCACAGAGGAGACACATGGTGCAGAAAGAGTCGCAACTGAAGAACGACGTGGAGGAGCTCAAGGATCAGTTGTCCCGTGTGGTGTGTGACATGCGAGCCCTGTTAGGAGCAGAGCGTCTGAGAAGACAGGAGCTGGCAGAAGCAGAGCTGGAGAAGAGGGAGCTGTTGGAGCTCCTCAGAGATCTGCAGCCAACCAGGAGCCAGCATCCTGTCGAACAGGCATCCAGTGACCAGCATCAGGGAGCCCAGCAGCAAACATCTGGATGGGAGCTGACAAGACACCAGCAGAGGGAAGCATCTTTACACGCCTCCAGACTGTCACTACATTCAGCTCAGGCCATAAATATATCAGGACCACCTCTATCACCTCAGCTGGGAGAGGGGACGCGCAAGGGTGGTACCAGGAGCCTGACTCTAGACTGCATCAAGAGGAAGAGCCGGGAGGTGACGGTCATCTGAGTAGACTGGACTGGTGGCAGATTAGCCAAACCAGAAATgataaaatcattatttttgtaatatttggCTAACAGTTTAGTAATGACAATATAGTGTGTGTACAGTACGCTATGGAATGATGCGTTGTTATAGTCTGCTGTGGAACGAACCATATGTTGTTTGAAAGGTGTTTTTGTGTAATTCTACAAACTAACTTGATCTTTTGATTGTAGGTGAGAAAGTGAATAGACATCAATTTATTTTGTGGACTCACCAGTGATCATTCCTGCAAACGGATCATTGTGTAATGTCTGTTATTTTTTATCTCAGGTTTTAATTATACACAGTTACTTCAAGTGATTTTCTTGTTCTCAGGACCAAATTATTCAGTTTCCTCAGTAGTGATCCATCTGATGCAGTATTTTCTGCTTTGAAAACGTTTGTTAAATGGTTCTTGAGTGTCCTGCAAGAACTTGGTTACGCGAGAACTTCTAAAATTATTTTAAGTCTAACCTAAAATGTTGAGTCACATTGTTGACTCACAATGTGTAATATTTCACAGCTTTGTCAATCTAAGGTATGAAAAACAAAGGCATACCAAGCAAATCTTGGAGAACAGCTATGTTACAGTTTGTGTTTTGGCATCAAGACTAAAGGACTGCATGTAGCACTACCAATATGATCTCTGAAATTAATATGGTAACTTGGTGTCGCAGTTGGCAAAGGCATGTATTTTGGGTTTAACTTGTGTTGTACATTCTGCACCTTTCTGTCTcacaaatatttcattttaaccACTTTAACTCATTAAATTCAAGGAACTATTCCTAAATGGTC
>XM_039805738.1
ACTGAGTCTAACGGAAATGGAAGTCCATAGGATATAAAGGGACTGGGATGAGTCCAGAGCTGCCTGCCTGTGTCCTGAACCCTGGTTGTCAGGGATACCTCTCCATGGAGACACACTCCCAAAGGTAGGGGAGGGCTTTAAGGGAAAGGAGACCCTCACCTTGATGGAGCAACAAGTCAAGAGAAAGGATGAAGAAGGAAAGActgttgtagtagtagtagtagtagtagtagtagtagtagtagtgcagAGATAAGAGGGAAGGTCACCTGTGTGGGACCAAGAGAAGGGGAAATCAACAGAAGGAAAGAAGAACAAAGAGTTGGATGAAGTGAGATCTGTTTTTGTCAGGATGGGCTATGATCTGGAGAGGtttgtgggctatgtgaatgaGGGtcttctgtgctgtgtgtgtcgaGACGTGTTGGAGCGCCCCCTCCAGGCGCCCTGCGAACATGCCTACTGCAGCGCCTGCATCAGCAGCTGGCTGGTCCATCATCACTCCTGTCCCGAGGACAGACTCCCACTGGATTTGGGCAGTCTCAAACCACTGTACAGGTACATGCGTAATGACCTGAACCGCCTGCAGATACGTTGTGTGAATGCAGGGCAGGGTTGTGAGGTGGTCTGCTGCCTGGAGAACCTGCACACACATGAGGATGAGTGCGAGTTTGCCTTCATTTCCTGCTCTAACACAGGTTGTCCTGTGCAGGTAGAGAGGCGGGGTTTGGAGGCTCATCTGTCGGAATGTAACTTCCGCAGCAGGGAGTGTCCCAACGGCTGTGGCCACACCCTTCTCTCCATCGACCAATCACAGCATAACTGTGTAGCAGAGGAGCTGCGCACAGAAGTGGAGATGCTCAGGGCAGAGATGCTGTGTaaggtggaggaggtgaaacgAGAGATGGAGTCTCGGTTGGATTCACAGAGGAGACACATGGTGCAGAAAGAGTCGCAACTGAAGAACGACGTGGAGGAGCTCAAGGATCAGTTGTCCCGTGTGGTGTGTGACATGCGAGCCCTGTTAGGAGCAGAGCGTCTGAGAAGACAGGAGCTGGCAGAAGCAGAGCTGGAGAAGAGGGAGCTGTTGGAGCTCCTCAGAGATCTGCAGCCAACCAGGAGCCAGCATCCTGTCGAACAGGCATCCAGTGACCAGCATCAGGGAGCCCAGCAGCAAACATCTGGATGGGAGCTGACAAGACACCAGCAGAGGGAAGCATCTTTACACGCCTCCAGACTGTCACTACATTCAGCTCAGGCCATAAATATATCAGGACCACCTCTATCACCTCAGCTGGGAGAGGGGACGCGCAAGGGTGGTACCAGGAGCCTGACTCTAGACTGCATCAAGAGGAAGAGCCGGGAGGTGACGGTCATCTGAGTAGACTGGACTGGTGGCAGATTAGCCAAACCAGAAATgataaaatcattatttttgtaatatttggCTAACAGTTTAGTAATGACAATATAGTGTGTGTACAGTACGCTATGGAATGATGCGTTGTTATAGTCTGCTGTGGAACGAACCATATGTTGTTTGAAAGGTGTTTTTGTGTAATTCTACAAACTAACTTGATCTTTTGATTGTAGGTGAGAAAGTGAATAGACATCAATTTATTTTGTGGACTCACCAGTGATCATTCCTGCAAACGGATCATTGTGTAATGTCTGTTATTTTTTATCTCAGGTTTTAATTATACACAGTTACTTCAAGTGATTTTCTTGTTCTCAGGACCAAATTATTCAGTTTCCTCAGTAGTGATCCATCTGATGCAGTATTTTCTGCTTTGAAAACGTTTGTTAAATGGTTCTTGAGTGTCCTGCAAGAACTTGGTTACGCGAGAACTTCTAAAATTATTTTAAGTCTAACCTAAAATGTTGAGTCACATTGTTGACTCACAATGTGTAATATTTCACAGCTTTGTCAATCTAAGGTATGAAAAACAAAGGCATACCAAGCAAATCTTGGAGAACAGCTATGTTACAGTTTGTGTTTTGGCATCAAGACTAAAGGACTGCATGTAGCACTACCAATATGATCTCTGAAATTAATATGGTAACTTGGTGTCGCAGTTGGCAAAGGCATGTATTTTGGGTTTAACTTGTGTTGTACATTCTGCACCTTTCTGTCTcacaaatatttcattttaaccACTTTAACTCATTAAATTCAAGGAACTATTCCTAAATGGTC
>XM_039805739.1
AATACGTTCTCTTCTCTCTATGCTTTAACAAAGATCCTACAGTCTCTGGCTTTAATAACAACAGGAGGCGAATAAAAGCATGACAACATCTAGACGTCGgatctgaatacttttccCACCACTGAGTCTAACGGAAATGGAAGTCCATAGGATATAAAGGGACTGGGATGAGTCCAGAGGATGGGCTATGATCTGGAGAGGtttgtgggctatgtgaatgaGGGtcttctgtgctgtgtgtgtcgaGACGTGTTGGAGCGCCCCCTCCAGGCGCCCTGCGAACATGCCTACTGCAGCGCCTGCATCAGCAGCTGGCTGGTCCATCATCACTCCTGTCCCGAGGACAGACTCCCACTGGATTTGGGCAGTCTCAAACCACTGTACAGGTACATGCGTAATGACCTGAACCGCCTGCAGATACGTTGTGTGAATGCAGGGCAGGGTTGTGAGGTGGTCTGCTGCCTGGAGAACCTGCACACACATGAGGATGAGTGCGAGTTTGCCTTCATTTCCTGCTCTAACACAGGTTGTCCTGTGCAGGTAGAGAGGCGGGGTTTGGAGGCTCATCTGTCGGAATGTAACTTCCGCAGCAGGGAGTGTCCCAACGGCTGTGGCCACACCCTTCTCTCCATCGACCAATCACAGCATAACTGTGTAGCAGAGGAGCTGCGCACAGAAGTGGAGATGCTCAGGGCAGAGATGCTGTGTaaggtggaggaggtgaaacgAGAGATGGAGTCTCGGTTGGATTCACAGAGGAGACACATGGTGCAGAAAGAGTCGCAACTGAAGAACGACGTGGAGGAGCTCAAGGATCAGTTGTCCCGTGTGGTGTGTGACATGCGAGCCCTGTTAGGAGCAGAGCGTCTGAGAAGACAGGAGCTGGCAGAAGCAGAGCTGGAGAAGAGGGAGCTGTTGGAGCTCCTCAGAGATCTGCAGCCAACCAGGAGCCAGCATCCTGTCGAACAGGCATCCAGTGACCAGCATCAGGGAGCCCAGCAGCAAACATCTGGATGGGAGCTGACAAGACACCAGCAGAGGGAAGCATCTTTACACGCCTCCAGACTGTCACTACATTCAGCTCAGGCCATAAATATATCAGGACCACCTCTATCACCTCAGCTGGGAGAGGGGACGCGCAAGGGTGGTACCAGGAGCCTGACTCTAGACTGCATCAAGAGGAAGAGCCGGGAGGTGACGGTCATCTGAGTAGACTGGACTGGTGGCAGATTAGCCAAACCAGAAATgataaaatcattatttttgtaatatttggCTAACAGTTTAGTAATGACAATATAGTGTGTGTACAGTACGCTATGGAATGATGCGTTGTTATAGTCTGCTGTGGAACGAACCATATGTTGTTTGAAAGGTGTTTTTGTGTAATTCTACAAACTAACTTGATCTTTTGATTGTAGGTGAGAAAGTGAATAGACATCAATTTATTTTGTGGACTCACCAGTGATCATTCCTGCAAACGGATCATTGTGTAATGTCTGTTATTTTTTATCTCAGGTTTTAATTATACACAGTTACTTCAAGTGATTTTCTTGTTCTCAGGACCAAATTATTCAGTTTCCTCAGTAGTGATCCATCTGATGCAGTATTTTCTGCTTTGAAAACGTTTGTTAAATGGTTCTTGAGTGTCCTGCAAGAACTTGGTTACGCGAGAACTTCTAAAATTATTTTAAGTCTAACCTAAAATGTTGAGTCACATTGTTGACTCACAATGTGTAATATTTCACAGCTTTGTCAATCTAAGGTATGAAAAACAAAGGCATACCAAGCAAATCTTGGAGAACAGCTATGTTACAGTTTGTGTTTTGGCATCAAGACTAAAGGACTGCATGTAGCACTACCAATATGATCTCTGAAATTAATATGGTAACTTGGTGTCGCAGTTGGCAAAGGCATGTATTTTGGGTTTAACTTGTGTTGTACATTCTGCACCTTTCTGTCTcacaaatatttcattttaaccACTTTAACTCATTAAATTCAAGGAACTATTCCTAAATGGTC

Function

NR:

description
PREDICTED: protein virilizer homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805736.1 False 2125 mRNA 0.46 8 21235187 21240428
XM_039805737.1 False 2128 mRNA 0.47 7 21235760 21240428
XM_039805738.1 True 2197 mRNA 0.47 7 21235695 21240428
XM_039805739.1 False 2025 mRNA 0.46 7 21235222 21240428

Neighbor

gene id symbol gene type direction distance location
pdp1 pdp1 coding upstream 44367 21183951 ~ 21190820 (+)
tmem67 tmem67 coding upstream 51839 21172523 ~ 21183348 (+)
si:ch211-197h24.6 NA coding upstream 67501 21161670 ~ 21167686 (+)
invs LOC102794544 coding upstream 83674 21129350 ~ 21151513 (+)
stx17 stx17,LOC102795111 coding upstream 118094 21106838 ~ 21117093 (+)
esrp1 esrp1 coding downstream 16297 21256725 ~ 21268854 (+)
sgk2b NA coding downstream 68450 21308878 ~ 21312066 (+)
l3mbtl1b l3mbtl3 coding downstream 74641 21315069 ~ 21329447 (+)
fam171a1 fam171a1 coding downstream 121166 21361594 ~ 21387306 (+)
nmt2 nmt2 coding downstream 149461 21389889 ~ 21396526 (+)
G74230 rad54b non-coding upstream 12292 21076311 ~ 21222895 (+)
G74234 NA non-coding upstream 78275 21101170 ~ 21156912 (+)
G74233 NA non-coding upstream 82675 21150389 ~ 21152512 (+)
G74207 NA non-coding upstream 341245 20893139 ~ 20893942 (+)
G74208 NA non-coding upstream 342532 20891684 ~ 20892655 (+)
G74274 kiaa1429,LOC104941925 non-coding downstream 2801 21243229 ~ 21243567 (+)
G74286 NA non-coding downstream 48743 21289171 ~ 21289375 (+)
G74287 NA non-coding downstream 49125 21289553 ~ 21290314 (+)
G74288 NA non-coding downstream 50614 21291042 ~ 21292380 (+)
LOC120562851 NA non-coding downstream 484520 21724948 ~ 21725705 (+)
sec61b sec61b,LOC102796100 other upstream 223773 21008013 ~ 21011414 (+)
glipr2l glipr2 other upstream 630022 20600323 ~ 20605165 (+)
gra NA other upstream 909226 20322330 ~ 20325961 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other upstream 1008196 20214588 ~ 20226991 (+)
LOC120561838 tppp other upstream 1025860 20192690 ~ 20209327 (+)
LOC120563169 NA other downstream 90984 21331412 ~ 21336665 (+)
crot acbd7,crot,LOC102783617,LOC101470173 other downstream 162607 21403035 ~ 21415894 (+)
them4 LOC106592246,LOC104959154,LOC101466288,LOC107096308,LOC100702377,LOC105029233,LOC106575342 other downstream 358606 21599034 ~ 21603458 (+)
G74633 tuft1,LOC102781808 other downstream 529120 21769548 ~ 21770286 (+)
slc50a1 slc50a1 other downstream 843241 22083669 ~ 22091963 (+)

Expression


Co-expression Network