LOC120562185


Basic Information

Item Value
gene id LOC120562185
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23921770 ~ 23937821 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805749.1
AATGTTTCATTGTGCTGCTTAGCTATGTGCCAAAATCACCCTGTAGCTATacggaaacacacacagcttaCTTCACAGTGAGAGGGCTAGGGCAGGAAGGAAAtgaggagagacagacacagagaaaaaaagagaccgagagacagagagacagagagacagagagacggagagatgGAGGGGAAAGCAGCAGATTAGGGTCACTGGGGTTTTCCACTGTGTAGgatcagaaaaaaacataagaagTAGGTAAGAGTGAGGAGGGGAAACACATCTGTAGCCACAGACAGTTCAGACAGCAGAAAGAGAGTGGAGATAGTCAGAAAAGGAGAAAGGGAAAATAGATTGTACCTAAGTGATGCTCTTTGAGCTGAGATTAATTAAATTACTGTCATTTCAAAAGTTAGGAGCAGGTTTAGAGGAAGAGTACACAGGAAGACAGTCGTTGCAGTCTTAAGCTTAGATCCTATACACACCGGTGGAGGACTATAATCGAATGGGCAACAAATGGCTAATATAAGCTGCACAAAGAGTAGTCAAGATGGGACATGCTGTGATCGCTGTGCTGCAGGAGAGTACATGAAAGTTGAATGTTACAGCACAAAGAAGACCGAGTGTGCCAAATGTGATAATGGGTTCTACACAGCCACAAAAAATAACTTGCTTAAATGTCAAGTCTGCAAGGAGTGCCGTTCCGaaaacaaacagaagaaaGTAAAGGACTGTACAGCTCAGGAGAAcacagtgtgtgggtgtgtggatgGTTTCTACTGTAGCAATGATCAATGTGACCACTGCATGCAAGTGACCCACTGCCAATTGGGTGAAGGGGTCAAGGTTCGAGCTACTCGCACGAATAATACAATCTGTGCTCCGTGTGAAGGCGGGACCTACAGCAACGTGACAGATTTCCTCTCGCCCTGTCGAACACACACCAGATGTGAGGACTTTGGAAGACTGTTGAAAACTCCAGGAACCCGAACAACTGATGCCATCTGTGGCAACTTTATAACTCATTGTCCCTGGATATTACCCGCAGGCCTGTGGTCAGGACTCGTGTTGACCGCACTTGTCCTTTTTGGTATCGTCTGCTGGAGGGCAAAACGCAAGTCATACAAAGCAGCCGGCTCCAGTGTTCCTGTTTCTCTGGTTGATATGGTTCCAGCAACACCGATCACTTCGCTGGAGCTGCCTCTACCGTTCACAGAGCTGAACGGTCACTGCCAAGAGAGCTGCACCGTGGAGTGCTGCAAGTTGCCGCTTTTTAACCCAGACGATAACGCGGTCAGTTGCGTCACACAAGACAGGGTGGACAGCATCATTCCTATAATTCCACTGAAGCCTTCGGTTTCATTCGTTGAATCCAGCTACACGAATGGAAGTACTGGATACTGCACCAGCAACTTCCTCAGGAGCTACTCAGAGCCACAGGAGGACGAGTGGTGTGGGACATAATCAAGTAGATGTTGGTGTAACAGTATGCTGATGGAGCTCAGAGTCCCACTCCAGTTTGTGGATGCTGCAACTAGTTTTCAAACCTCAAACTGAACCTATTTAtaccaaaaaaactaaagagTAAAGGTTTCACTTTTCCAGAAGACTTGAAGGTGGCTGATGGTTTGCTACCCCCTGCAGGACTTTAATGAGAAGTTCAGCTCAAGTGATGTGATATTTCTGTAATGCATTTACAATAAAGCAAACAGCTAAAAGGTATTTTTCCAAAACACTGATGGAGGTTTGTACTTGAGTCAGTATTTTTAATGTGAATGAGTCTTAGATACAAGCTTCACAAGTTACTGCActgctgtctgtgtttttagctACAGCTCAGTGGGGTCTATTAgataataattatatttataatgctatatttttctttttctgacaaATCCTATGAAAAGgccaaaccaacaatgaataTATCCTTCCAACAAGTATGTATGTGTAGTCAAAGCAGCTTATTATTCTTTATGGAGCTCCGGTGTCATCCAAACACACTCAGCGAGTGACACTTGTACACTGTGTAACCTGTTACTTCATTACCATGAATGTGGACACTGTATTTTATAGAAGCAAGAAAATAGCCCCTAACAAATACTGTATTttctcctgtttgagtaactattgtaaaaaaaaagattctgtgGCTTAACGTTTATAGTAAATCATGTATTTTgtaattataaattaaatgatatctattttttttaaaagtacatTGTATTACAAATTATAACCACCAACCTTAAGatatgcaacacacacaaatcttgGAGAATGAGGTGTTGAATGAAAGAGGCAGCAGTGACTTCTGACAGATGTAAAATTTGTTTATAACATTGTAAAGATCGATAGTGCAATATGAGGAAGTGTGTAGGGAATGTTTACACAAGTCATTCTCAGTTAGTACCATTAGACAGAGGTAATTACGATGTATTTTTACAGGTCTTATTGTGatatttcaaaataatgttgattataataaaaaaaaactataaaaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805749.1 True 2504 mRNA 0.41 8 23921770 23937821

Neighbor

gene id symbol gene type direction distance location
mrpl51 mrpl51,LOC102789637 coding upstream 50056 23869637 ~ 23871714 (+)
plekhg6 NA coding upstream 63492 23844077 ~ 23858278 (+)
tnfrsf1a NA coding upstream 77811 23836781 ~ 23843959 (+)
si:dkey-260g12.1 NA coding upstream 92085 23823324 ~ 23829685 (+)
iffo1b iffo1,LOC102791264 coding upstream 99427 23808580 ~ 23822343 (+)
wnt4b LOC104932544,LOC103356104,LOC101479331 coding downstream 60614 23998435 ~ 24002544 (+)
mlf2 mlf2 coding downstream 73062 24010883 ~ 24019095 (+)
LOC120562699 eno2 coding downstream 82074 24019895 ~ 24025854 (+)
LOC120563208 NA coding downstream 116451 24054272 ~ 24054328 (+)
clstn3 clstn3,LOC102784285 coding downstream 136262 24074083 ~ 24098119 (+)
G75427 NA non-coding upstream 37139 23883177 ~ 23884631 (+)
LOC120561968 NA non-coding upstream 287936 23631416 ~ 23633834 (+)
G75301 NA non-coding upstream 427293 23494213 ~ 23494477 (+)
G75227 NA non-coding upstream 480544 23437096 ~ 23441226 (+)
G75199 LOC103372680 non-coding upstream 567595 23351145 ~ 23354175 (+)
G75483 ptpn6 non-coding downstream 5672 23943493 ~ 23948403 (+)
G75493 NA non-coding downstream 34506 23972327 ~ 23975734 (+)
G75517 NA non-coding downstream 90062 24027883 ~ 24031339 (+)
G75523 tpi1,tpi,LOC102304959 non-coding downstream 111104 24048925 ~ 24052956 (+)
G75582 gnb3,LOC103375278 non-coding downstream 181496 24119317 ~ 24122009 (+)
LOC120563047 vamp1,LOC104928996 other upstream 42355 23873909 ~ 23879415 (+)
LOC120563204 NA other upstream 108362 23768233 ~ 23813408 (+)
casp2 casp2,LOC102795506,LOC103369458 other upstream 270274 23641555 ~ 23651496 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other upstream 350527 23560848 ~ 23571243 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other upstream 427736 23491125 ~ 23494034 (+)
atn1 atn1 other downstream 89094 24026915 ~ 24039427 (+)
lpcat3 lpcat3 other downstream 118616 24056437 ~ 24073698 (+)
G75644 NA other downstream 497318 24435139 ~ 24436819 (+)
dedd1 dedd2 other downstream 582914 24520735 ~ 24534276 (+)
grik5 grik5 other downstream 868468 24806289 ~ 24885373 (+)

Expression


Co-expression Network