tnfaip8l2b (tnfaip8l2)


Basic Information

Item Value
gene id tnfaip8l2b
gene name tnfaip8l2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 32892531 ~ 32900329 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805774.1
CAAGCAGAGGCACAACGTCAGCAATACAGACAGAGACgagcagggagagagacagaccggATCACAGAGAGTGCCAAGGTGTGATGAGCGAAGGGCAAGAGAGAAATACAGGGGGTTTGAAgagtttgaatttgaatttcagagggaaacaccagatagggtagagagagagagagtaagacagagagagagagagagagagcgagagagagagacactgaggGGTGTGTCATAGCAAGTTAGTTCCTCGAGGAAGTACAACTCAACATTATCTTAAGACAGGGTGGCAGCACTGACAGAAGCGCTGCAGGAGGGCgcttttttcagattttggtTCTGCTCGTGGTGAAGATAAAGGGATCTCATTAAATCAACCGACCTGTGCTGTCAGCCTTAAACACAGAGcagagtgagaggagagagagagagatatctgACACACACCAAGAGGGAGGgggactcaacacacacacacgcacacacacagGCAGCCATGGACTCCTTCAGCTCCAAGGACATGGCCTTGAGGGCGCAGAAGAAGATCCTGAGCTCCATGGCCACCAAAAGCTCTGTCCAAATGTTCATTGACGACACCACCAGCGAGATCCTGGATGAACTGTACCGCGTCTCCAAAGAGTACTCTGGTAATAAAACGGAGGCCCAGAAGGTGATCAAAGACCTGGTCAAGATTGCCGTGAAGATTGGCTTGCTGTTTAGGAACAACCGTTTTAGCACCGAGGAGCTGGCAGTGGCCACCGATTTTAAGAAGAAGCTGCACCAGGGAGCCATGACGGCTATCAGCTTTTACGAGGTGGATTTTACCTTTGATAAAGCAGTGATGGAAGAACTCCTCACCAGCTGCAGGGATCTGCTGCTGAAGCTAGTGAACACCCACCTCACCCCTAAATCCCACGGTCGCATCAACCACGTCTTCAACCATTTCTCTGACCCAGAGCTCCTGACCAAACTGTACGACCCCAGCAGCCCCTTTCGAGACCACCTTACCAAGATCTGCAAAGGACTCGACAAACTTATGGAGGAGGGGACAATATGACATAGAAATAATACaatcacagacagacactggGAGATCAACAGGCAAGACTCAGCTGAGACTCAGAACTGTTGAACACAACTGGTCTTACTGCTGCGGAGGACTCGCAACGCAAGACAATTGATTTGAGAACAAAACTGCTGCCCCATCGTTCTCAAAGAACATGTgggattaaaaaataaagttggttgactcatagtgcgttccatttgtactcggaagtcgGAATTTCCAAGTTCAAAGTCCGGCAC
>XM_039805775.1
CACAACGTCAGCAATACAGACAGAGACgagcagggagagagacagaccggATCACAGAGAGTGCCAAGGCAGCCATGGACTCCTTCAGCTCCAAGGACATGGCCTTGAGGGCGCAGAAGAAGATCCTGAGCTCCATGGCCACCAAAAGCTCTGTCCAAATGTTCATTGACGACACCACCAGCGAGATCCTGGATGAACTGTACCGCGTCTCCAAAGAGTACTCTGGTAATAAAACGGAGGCCCAGAAGGTGATCAAAGACCTGGTCAAGATTGCCGTGAAGATTGGCTTGCTGTTTAGGAACAACCGTTTTAGCACCGAGGAGCTGGCAGTGGCCACCGATTTTAAGAAGAAGCTGCACCAGGGAGCCATGACGGCTATCAGCTTTTACGAGGTGGATTTTACCTTTGATAAAGCAGTGATGGAAGAACTCCTCACCAGCTGCAGGGATCTGCTGCTGAAGCTAGTGAACACCCACCTCACCCCTAAATCCCACGGTCGCATCAACCACGTCTTCAACCATTTCTCTGACCCAGAGCTCCTGACCAAACTGTACGACCCCAGCAGCCCCTTTCGAGACCACCTTACCAAGATCTGCAAAGGACTCGACAAACTTATGGAGGAGGGGACAATATGACATAGAAATAATACaatcacagacagacactggGAGATCAACAGGCAAGACTCAGCTGAGACTCAGAACTGTTGAACACAACTGGTCTTACTGCTGCGGAGGACTCGCAACGCAAGACAATTGATTTGAGAACAAAACTGCTGCCCCATCGTTCTCAAAGAACATGTgggattaaaaaataaagttggttgactcatagtgcgttccatttgtactcggaagtcgGAATTTCCAAGTTCAAAGTCCGGCAC

Function

symbol description
tnfaip8l2 Predicted to be involved in negative regulation of T cell activation and negative regulation of inflammatory response. Predicted to be active in cytoplasm.

NR:

description
tumor necrosis factor alpha-induced protein 8-like protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805774.1 True 1305 mRNA 0.49 3 32892531 32900329
XM_039805775.1 False 886 mRNA 0.50 3 32892541 32900329

Neighbor

gene id symbol gene type direction distance location
LOC120562193 LOC103388706 coding upstream 4181 32853357 ~ 32888350 (+)
LOC120562270 scap coding upstream 518344 32315022 ~ 32374187 (+)
elp6 elp6,LOC102790853 coding upstream 577618 32309084 ~ 32314913 (+)
cspg5a cspg5,LOC103364230 coding upstream 598829 32229003 ~ 32293702 (+)
LOC120562445 NA coding upstream 680354 32204754 ~ 32212177 (+)
scnm1 LOC104949611 coding downstream 5032 32905361 ~ 32911192 (+)
LOC120562446 NA coding downstream 46982 32947311 ~ 32950710 (+)
hormad1 NA coding downstream 131910 33032239 ~ 33049137 (+)
onecutl LOC106524064,LOC104923936,LOC108243192 coding downstream 186861 33087190 ~ 33096138 (+)
lingo4b LOC104947071,LOC108243198 coding downstream 275580 33175909 ~ 33200642 (+)
G77867 NA non-coding upstream 71043 32821243 ~ 32821488 (+)
G77862 NA non-coding upstream 126023 32766271 ~ 32766508 (+)
G77776 NA non-coding upstream 439121 32453187 ~ 32453410 (+)
G77762 NA non-coding upstream 515618 32374697 ~ 32376913 (+)
G77764 NA non-coding upstream 523453 32360545 ~ 32369078 (+)
G77883 NA non-coding downstream 28005 32928334 ~ 32979901 (+)
LOC120563080 NA non-coding downstream 51648 32951977 ~ 32952703 (+)
G77887 LOC103369030 non-coding downstream 117192 33017521 ~ 33050500 (+)
G77890 NA non-coding downstream 121769 33022098 ~ 33029791 (+)
G77897 NA non-coding downstream 151151 33051480 ~ 33052859 (+)
LOC120561717 NA other upstream 471059 32405133 ~ 32421472 (+)
G77682 tbx20 other upstream 912622 31976318 ~ 31979909 (+)
G77447 NA other upstream 1756385 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 2160922 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 2531943 30351495 ~ 30360588 (+)
G77888 NA other downstream 200084 33100413 ~ 33101534 (+)
bmper bmper other downstream 925758 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 994031 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 1090213 33990542 ~ 34042648 (+)
G78200 NA other downstream 1629026 34529355 ~ 34544379 (+)

Expression


Co-expression Network