LOC120562212


Basic Information

Item Value
gene id LOC120562212
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 32145392 ~ 32149331 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805801.1
AAGATAAGATGTGCACATAAACATCCCTGTGTGGTCACATCAAATCATATTCACCAACACAACATCAACAGCGGCTCCTcatcttcttaaaaaaaaagcatcttgGATATCTAACTTCTGTAACAAAGATAGCCTTAGGTCAGGGATACATTTAATACAGTAATAATGATGACAATGTTCTTGTCTGTTTCAACCAGAACAATGAAACACAGTTCAGTTCTGCTTTTGCTGTTCCTTCTGGGGACGTGCTCGGCTTACACCTATCAAAATGTGGCCTTGCGTGGGAAAGCGACCCAGTCAAACCGTTTTGCTGACATGTATGGTTTTGCCCACAATGCTATTGATGGAAACCGTGAATTTGACTACAGCGCCGGATCATGCACCCACACTATTGAACAGACCAACCCCTGGTGGAGAGTGGACCTGCTGGAGTCCTACATCGTCACCTCCATCATCATCACCAACAGAGGAGACTGCTGTGCAGAAAGGCTCAACGGGGCAGAGATTCACATCGGCAACTCTTTACAAGACAATGGTGCTGCAAACCCCATGGTTGGTGTAATTTCAAATATTCCAGCAGGCAGGTCTCTAAAAATTACTGTTACCAGTCTTGTGGAGGGACGTTATGTCACTGTGGTTCTACCTGGTTTAAAAAGAGTCCTTACACTCTGCGAAGTGGAAGTCTACGGCTACCGGGCCCCAACTGGAGACAACCTGGCACTCCAAGGAAAAGCCTCACAGTCATCATTGTATTCTAACGGCATTGCATATAATGCTATAGATGGGAATCGTGACGGCATCTGGAGCAAGGGTTCTTGTACTCACACAAAACCCGACTTTAACCCCTGGTGGCGACTGGACCTGGTCAAAACCCACAAAGTGTTTTCTGTTAACATAACCAACACTGTAGATTCTGTCCCACAACGACTCAATGGAGCTGAAATTCGAATTGGACATTCTCTTGATAACAATGGAAACAACAATCCTAGGTGTGCTGTGATCTCAAGCATCCCTGGAGGTTTCACTGAAACCTTCCAGTGTAACGGGATGGACGGTCGCTACGTTAACATCGTTATTCCTGGAAGAAGCGAGTACCTGACCCTGTGTGAGGTGGAGGTCTACGGCTCCAGACTGGATTAGGTCTGAGGAGGTTCAAAATGTATAACAACATTTTACATTGCAGATGTTCAGCTGATGCTCTTGTACAGACTCATGTTGCAACCATAGATTAAGATTAATTTGCTATCTAAATTTAAAAAGTGTTGatctccgaatgcgaatgaacggactccagaggaggaaatgtcattcttatacgaggctcctttttcaactacaaggtcaatattgtttttcactaacgacaaaacaacaaattatccgtGCGTTTATATGGCGCTAAGCTTTAGGAGcgttccatctttactctcctccctgtttcgttgcattcggagatcgactctttttgactggcaagattGACGGCGACCGGAAACaacaactgctaaagtgagttgttcaaaacctttctttttagtaaactctgtgtacacaaacaatgttctcaacgCTGGAGTtgatgtgtagagcccctggtgatacttggagcaaagtt

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805801.1 True 1615 mRNA 0.44 5 32145392 32149331

Neighbor

gene id symbol gene type direction distance location
dpy19l1l dpy19l1,LOC102792675 coding upstream 21015 32090158 ~ 32124377 (+)
herpud2 LOC103361314 coding upstream 185994 31949622 ~ 31959398 (+)
pkdc LOC102076377,LOC101468599,LOC102793757,LOC102209191,LOC102303972 coding upstream 197619 31943411 ~ 31947773 (+)
LOC120562640 NA coding upstream 213345 31917746 ~ 31932047 (+)
arl4aa arl4a,LOC103374731,LOC104928894 coding upstream 640730 31500830 ~ 31504662 (+)
smarcc1a smarcc1 coding downstream 16988 32166319 ~ 32193048 (+)
LOC120562445 NA coding downstream 55423 32204754 ~ 32212177 (+)
cspg5a cspg5,LOC103364230 coding downstream 79672 32229003 ~ 32293702 (+)
elp6 elp6,LOC102790853 coding downstream 159753 32309084 ~ 32314913 (+)
LOC120562270 scap coding downstream 165691 32315022 ~ 32374187 (+)
G77722 LOC102207529,LOC102306104 non-coding upstream 5249 32138777 ~ 32140143 (+)
G77687 NA non-coding upstream 155022 31989886 ~ 31990370 (+)
G77685 NA non-coding upstream 159652 31985466 ~ 31985740 (+)
G77684 NA non-coding upstream 162676 31982468 ~ 31982716 (+)
G77683 NA non-coding upstream 163000 31980051 ~ 31982392 (+)
G77757 NA non-coding downstream 145764 32295095 ~ 32295320 (+)
G77764 NA non-coding downstream 211214 32360545 ~ 32369078 (+)
G77762 NA non-coding downstream 225366 32374697 ~ 32376913 (+)
G77776 NA non-coding downstream 303856 32453187 ~ 32453410 (+)
G77862 NA non-coding downstream 616940 32766271 ~ 32766508 (+)
G77682 tbx20 other upstream 165483 31976318 ~ 31979909 (+)
G77447 NA other upstream 1009246 31134829 ~ 31136146 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other upstream 1413783 30687338 ~ 30731609 (+)
LOC120562443 NA other upstream 1784804 30351495 ~ 30360588 (+)
G77239 NA other upstream 2020754 30123702 ~ 30124638 (+)
LOC120561717 NA other downstream 255802 32405133 ~ 32421472 (+)
G77888 NA other downstream 951082 33100413 ~ 33101534 (+)
bmper bmper other downstream 1676756 33826087 ~ 33879132 (+)
LOC120562157 NA other downstream 1745029 33894360 ~ 33904285 (+)
sh3bp5b sh3bp5,LOC102783023 other downstream 1841211 33990542 ~ 34042648 (+)

Expression


Co-expression Network