si:dkey-260g12.1


Basic Information

Item Value
gene id si:dkey-260g12.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23823324 ~ 23829685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805816.1
AACCGTTAAGGACCTTATTTCCTTTCAGAAATGAACCATCACTAACACAAATGATCTGCTCTTCCATCATGACACACTAACTGCACAGAGTCTCTGTCAGGTCTTACAGTTTGCGTGGAAAGTGATGAGACTTTGTTACAGAAACGTTAGTCAGAGTGCCGATGGGTCTGCGTGTGAGAACTGAACGTGTAAACAGGACAGCAGCACACTGGTAGAGTGGGCGGGGAAGACAGGATGTCACCAGGTAAGGAAATAGTGACACAGAGGATGGGTAAAGTGAGtgagaggacagaggaagaaagagagttGCACCTTGAGGAAGTTAACAAAACAATAGAAGGAGAACAAAAGGCGCATCATATTGAAGTATGAGACTGGTGCAATGTTTCGTGGTTGTCTTGATGTTATCTGCACAGCTGGTGCTTACCTCTCCAGTGAATTACGCTATGGACGGCAGAACCTGTAAAATGTGCCCTGCAGGTAAGATGATGTGTGAGTATCAGAAGTCTTGTACAGAGTGTGAGTCCTGTCCTGCTGGAAGCTACACAATTGAGTTGAACCGTGAAGACAGCTGCCATGACTGCTACAGAGACTGCAGACCAGATTTTCATCTGAAGATGGTTCAGAACTGCACCAGCACGTCCAATGTATTGTGCGACTGTGAGGATGGTTTCAAATGCGTTCAGCGGGTCACAGGTTCAACAAACTGCAGAACCTGTGTCAAGATCCAAGAAACGACCACAACTGAAGCAGCTTCTGGTTTTTCAGTCAAAGATAAACACACAACTTCCTCAGCTTCCTCAGGACATAGCAGCACTTCCACTAAACCTTGCATATTTCCTAAGTGTGGCACTCAGTCAGTCCCACCGGCAGGAAATGGCACACATCTCAAAGAAGACAAGCTGGCAGCCATCTTGTGTCCAGTGGTTGTTGTGGGATGTGTGGCCCTTGTGATCCTGCTTTTAGTATGTCGCCCCGGAGATGAAACATGTTTCAAGCAAGCTATTGCACTGTTTTGCAATGAAGGAGGTAGAGACGCTTCTCGCAAGCCAAAGGAGTCAACTCATCAGATCCCCAGAGACTCATTCAGTGCAAAGCAGCAGCCGTCAGGCCTCTCAGCAGCCAATCTGGGTCCAGTTCATGTCCACAATCCTGGGACGGTCATCTTTAGCTTGCTCAGTCAGTTTACAGGCCAAGTTGGTCCGACAACTGAATGTGGGAAGGCGGCCAAGAGAGTGATCagcgaagaagaagagagagactgTCCTGTGTTTCATCCCACATCCTCTCCCAGTATCCATCTctctgaggaggagaggagcgGAGAGATTGACAGCATTTTCTTTCCCTCCCAGGAGCAGGGGAAGGACTGCCACGTGTCCAAAGAGGAGGCGCTATAATGGGTCATTAAATCCCAGAAGATTTGTGTTGGTGGTTACGACCTCTGGCATCCAGACTGAtgctaaacacatttttttaaaggaaggAACTGTAAAACTGTGAAACCACAGATGCGTGTTGGGCAGATCCATCTCCCTCTGTCAAACTGTGAAGGGACCTGAGTGCTCTCCAAAGACATTTTTATCTGCAGGTTCTTGAAAAGGTTGTGGTCAGTGCACACCAGACTTTAACTCTGGGAAGACTAGCTGGAGGGTGATCTCCTTTGTAagttataatttaaaatatcaTGTAAATACACTGTAATATGCTCTGCCAGCTCTCTAAAgtattaaaatgttttgcataaataga
>XM_039805817.1
ACCGTTAAGGACCTTATTTCCTTTCAGAAATGAACCATCACTAACACAAATGATCTGCTCTTCCATCATGACACACTAACTGCACAGAGTCTCTGTCAGGTCTTACAGTTTGCGTGGAAAGTGATGAGACTTTGTTACAGAAACGTTAGTCAGAGTGCCGATGGGTCTGCGTGTGAGAACTGAACGTGTAAACAGGACAGCAGCACACTGGTAGAGTGGGCGGGGAAGACAGGATGTCACCAGGTAAGGAAATAGTGACACAGAGGATGGGTAAAGTGAGtgagaggacagaggaagaaagagagttGCACCTTGAGGAAGTTAACAAAACAATAGAAGGAGAACAAAAGGCGCATCATATTGAAGTATGAGACTGGTGCAATGTTTCGTGGTTGTCTTGATGTTATCTGCACAGCTGGTGCTTACCTCTCCAGTGAATTACGCTATGGACGGCAGAACCTGTAAAATGTGCCCTGCAGGTGAGTATCAGAAGTCTTGTACAGAGTGTGAGTCCTGTCCTGCTGGAAGCTACACAATTGAGTTGAACCGTGAAGACAGCTGCCATGACTGCTACAGAGACTGCAGACCAGATTTTCATCTGAAGATGGTTCAGAACTGCACCAGCACGTCCAATGTATTGTGCGACTGTGAGGATGGTTTCAAATGCGTTCAGCGGGTCACAGGTTCAACAAACTGCAGAACCTGTGTCAAGATCCAAGAAACGACCACAACTGAAGCAGCTTCTGGTTTTTCAGTCAAAGATAAACACACAACTTCCTCAGCTTCCTCAGGACATAGCAGCACTTCCACTAAACCTTGCATATTTCCTAAGTGTGGCACTCAGTCAGTCCCACCGGCAGGAAATGGCACACATCTCAAAGAAGACAAGCTGGCAGCCATCTTGTGTCCAGTGGTTGTTGTGGGATGTGTGGCCCTTGTGATCCTGCTTTTAGTATGTCGCCCCGGAGATGAAACATGTTTCAAGCAAGCTATTGCACTGTTTTGCAATGAAGGAGGTAGAGACGCTTCTCGCAAGCCAAAGGAGTCAACTCATCAGATCCCCAGAGACTCATTCAGTGCAAAGCAGCAGCCGTCAGGCCTCTCAGCAGCCAATCTGGGTCCAGTTCATGTCCACAATCCTGGGACGGTCATCTTTAGCTTGCTCAGTCAGTTTACAGGCCAAGTTGGTCCGACAACTGAATGTGGGAAGGCGGCCAAGAGAGTGATCagcgaagaagaagagagagactgTCCTGTGTTTCATCCCACATCCTCTCCCAGTATCCATCTctctgaggaggagaggagcgGAGAGATTGACAGCATTTTCTTTCCCTCCCAGGAGCAGGGGAAGGACTGCCACGTGTCCAAAGAGGAGGCGCTATAATGGGTCATTAAATCCCAGAAGATTTGTGTTGGTGGTTACGACCTCTGGCATCCAGACTGAtgctaaacacatttttttaaaggaaggAACTGTAAAACTGTGAAACCACAGATGCGTGTTGGGCAGATCCATCTCCCTCTGTCAAACTGTGAAGGGACCTGAGTGCTCTCCAAAGACATTTTTATCTGCAGGTTCTTGAAAAGGTTGTGGTCAGTGCACACCAGACTTTAACTCTGGGAAGACTAGCTGGAGGGTGATCTCCTTTGTAagttataatttaaaatatcaTGTAAATACACTGTAATATGCTCTGCCAGCTCTCTAAAgtattaaaatgttttgcataaataga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805816.1 True 1752 mRNA 0.47 11 23823324 23829685
XM_039805817.1 False 1739 mRNA 0.47 11 23823325 23829685

Neighbor

gene id symbol gene type direction distance location
iffo1b iffo1,LOC102791264 coding upstream 981 23808580 ~ 23822343 (+)
opn9 NA coding upstream 15158 23803552 ~ 23808166 (+)
gapdh gapdh,LOC102791742 coding upstream 21137 23797078 ~ 23802187 (+)
wu:fj39g12 LOC104929004,LOC100710783,LOC101474397 coding upstream 30231 23791000 ~ 23793093 (+)
LOC120563206 NA coding upstream 55857 23767185 ~ 23767467 (+)
tnfrsf1a NA coding downstream 7096 23836781 ~ 23843959 (+)
plekhg6 NA coding downstream 14392 23844077 ~ 23858278 (+)
mrpl51 mrpl51,LOC102789637 coding downstream 39952 23869637 ~ 23871714 (+)
LOC120562185 NA coding downstream 92085 23921770 ~ 23937821 (+)
wnt4b LOC104932544,LOC103356104,LOC101479331 coding downstream 168750 23998435 ~ 24002544 (+)
LOC120561968 NA non-coding upstream 189490 23631416 ~ 23633834 (+)
G75301 NA non-coding upstream 328847 23494213 ~ 23494477 (+)
G75227 NA non-coding upstream 382098 23437096 ~ 23441226 (+)
G75199 LOC103372680 non-coding upstream 469149 23351145 ~ 23354175 (+)
G75197 NA non-coding upstream 472557 23346840 ~ 23350767 (+)
G75427 NA non-coding downstream 53492 23883177 ~ 23884631 (+)
G75483 ptpn6 non-coding downstream 113808 23943493 ~ 23948403 (+)
G75493 NA non-coding downstream 142642 23972327 ~ 23975734 (+)
G75517 NA non-coding downstream 198198 24027883 ~ 24031339 (+)
G75523 tpi1,tpi,LOC102304959 non-coding downstream 219240 24048925 ~ 24052956 (+)
LOC120563204 NA other upstream 9916 23768233 ~ 23813408 (+)
casp2 casp2,LOC102795506,LOC103369458 other upstream 171828 23641555 ~ 23651496 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other upstream 252081 23560848 ~ 23571243 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other upstream 329290 23491125 ~ 23494034 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other upstream 740177 23070587 ~ 23083147 (+)
LOC120563047 vamp1,LOC104928996 other downstream 44224 23873909 ~ 23879415 (+)
atn1 atn1 other downstream 197230 24026915 ~ 24039427 (+)
lpcat3 lpcat3 other downstream 226752 24056437 ~ 24073698 (+)
G75644 NA other downstream 605454 24435139 ~ 24436819 (+)
dedd1 dedd2 other downstream 691050 24520735 ~ 24534276 (+)

Expression


Co-expression Network