LOC120562247


Basic Information

Item Value
gene id LOC120562247
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 5355807 ~ 5357294 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805870.1
cagtagtaggagctacttctGCATTTCTTCCAGCCCGCCCATAGGGGGTGGGACCAATGGGTGGGACCCATAGCCAGTATGGGGACCTCCCTCCCAGATTGTAAACAGTGTCAGCCATCCTGTAGCTAAGCTACCTCGCTCTTGCTCTTGTGGAGAAAGCCGAGTAGTAGATTCACCACGATGGCAGAAGGTAGTTCTGAAGACGATATGGCAGAAGGTGATTTTGAAGATCTGGTGCGCGAATCTGATGCTCGTGGCTACCTGTACGAGCCGAATTACAGCGAGGAACAGTTGCGGATGATAGAGGAACAAGAGGCTGCCGGAGCAGCTGCTGTAGCAGAGGAGCGAGATTTGCCTGGCGGTATTGAGGAAGATCCCGGGCAGACTCGAGCTGGGGCGGATTGGTGGTGTCAGTGTTGTCGCTGTGCGCCAatggacacagacagagagtccTGTTGCTGTCGCGAATTTCAGCGATGCCATTTTCTTCTTGAAGAAATAGCTGAATCTGCTGACGAAACGGCACCGCCAGCATGTGTAACAGAGCACCCTAGCTTTGGTCCACACATGGACAGGGGAGTCCTGGAAACTTATTTCAGGATCCCGAAAGTGAATTGGAAACGCCAACCAAAGCCCGCAGGGAGAAACGGACGCCTGAGTATAAAACAATATCGCCTAACAGCCTACCGTCACTTCGTGGAATGGGTCCTGCAAGGCGAGAGATTGGGAAAAGGCTATCGTCTTGTTTTGCCTGCCTGTGTTGTTCAGGACATCAGACGGAGATATCCAGCTCCTGACGGACAATACTGTGGCTATAAAGAAACTATTGAAGCTCTGGATGAGCTATGAGTGTGAAATTGATCAGTATGCTGGTTCTTCAAAAACTTACAAATTGTTCTTGGCCAGAGGCAGGAATTCTGACTGGTGTTGAAGTCAGCAACAATTGTTTTTCATCCTCCGACGATGACACTAACGGATTATACGTGATTGGAGTCTGAAATTACATAAATTCAATAACGTTAAAAACATTTGAATGAACTGAACTTTTTCTGAAGTGAAAACAACGTAAGAataacattgccaaaataaCAAGGGCACACCTCtaacatatgcacatttaaaggGTTACACCCGGACATAGATGACCATGTGGGTGTCAATTCTTTTGAAGTTTACAGGAATTAGCATTCTTTTGTTCTAATCTAGTCTGCAGGACAGCAGGGGTCCAAGATAGAGACAAAAGGTTGATTTCTGCTGTGAAAAGGAGCTTTGTCATGGTTGCTAAATTTCTGACATGATCTAATTTATCTTGAGAAATTTAGGAAGGTTTGAACACAAtgaccagtgttgggcaagttacttcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805870.1 True 1365 mRNA 0.46 2 5355807 5357294

Neighbor

gene id symbol gene type direction distance location
LOC120562920 mc5r,LOC101487483,LOC100693278,LOC102795483 coding upstream 290134 4946358 ~ 5065673 (+)
cep192 cep192 coding upstream 784498 4474006 ~ 4571309 (+)
seh1l seh1l coding upstream 883140 4463437 ~ 4472667 (+)
LOC120561648 LOC106523394 coding upstream 1465749 3889015 ~ 3890058 (+)
ebag9 ebag9 coding upstream 1482907 3854146 ~ 3872900 (+)
LOC120561876 NA coding downstream 455583 5812877 ~ 5814642 (+)
tsnare1 tsnare1,LOC101472715 coding downstream 1279558 6636852 ~ 6805600 (+)
LOC120562880 NA coding downstream 1647310 7004604 ~ 7029761 (+)
fzd1 fzd1,LOC104958298,LOC104925482 coding downstream 1938652 7295946 ~ 7298242 (+)
LOC120561797 NA coding downstream 2307944 7665238 ~ 7707591 (+)
G70799 NA non-coding upstream 48066 5307111 ~ 5307741 (+)
G70794 NA non-coding upstream 56480 5297716 ~ 5299327 (+)
G70793 NA non-coding upstream 68278 5287136 ~ 5287529 (+)
G70787 NA non-coding upstream 81602 5273976 ~ 5274205 (+)
G70782 NA non-coding upstream 109667 5241676 ~ 5246140 (+)
G70829 NA non-coding downstream 112328 5469622 ~ 5470432 (+)
G70836 NA non-coding downstream 122812 5480106 ~ 5480440 (+)
G70837 NA non-coding downstream 123215 5480509 ~ 5480793 (+)
G70838 NA non-coding downstream 123617 5480911 ~ 5481172 (+)
G70848 NA non-coding downstream 190530 5547824 ~ 5548052 (+)
LOC120562617 ldlrad4 other upstream 463750 4810388 ~ 4892057 (+)
G70654 NA other upstream 689701 4665784 ~ 4666106 (+)
trnar-ucg_13 NA other upstream 1242526 4113209 ~ 4113281 (+)
trnai-aau_22 NA other upstream 1242883 4112851 ~ 4112924 (+)
trnar-ucg_12 NA other upstream 1243572 4112163 ~ 4112235 (+)
si:ch211-198c19.1 NA other downstream 233905 5591199 ~ 5594900 (+)
G70894 NA other downstream 603161 5960455 ~ 5960854 (+)
cdk14 cdk14 other downstream 1681869 7039163 ~ 7292435 (+)
znrf2b znrf2 other downstream 2099473 7456767 ~ 7500182 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other downstream 2373728 7731022 ~ 7801380 (+)

Expression


Co-expression Network