LOC120562274


Basic Information

Item Value
gene id LOC120562274
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35621760 ~ 35630081 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805911.1
CCCGTTTTTACTTTCTCCTATTTTGGATTTTTTCTTTACCTGCTGTTTGGCTGTAAACcttttgtttgtgttctgtTATTCATCAAGATCTACTCTGCCTGCTACCTCTGCTTTGGGGTCTGCCATACTCCACAACCTAACGGTCTCCGACACTTTACTGCTGCTACTTCATCATGTTGAAGCCCGTTGCATTGCTCCTTCTGCTGGCAGGTGTGGTCCACACTGTGCCCCACCCTGTGTGCACTGTGACTGCCTCCACCGTCATTGATTTCTTCAACAGAATCCGGTCGGTCCCGGATCGCTGTACATACACACTGATTGGAGATGACACTGTTGTACTAGCAGCGAGATTCCAGGAGCGAAGCCGTACAGATGTGCCGTTTTTGGACTCCTTGCAAATAATTTTAATAGTTTCAACATCTGCCTTGGACGTCTATCGATACCTAGAAATCTATCTTGGACAAGGGGGACTAGTTCAGGTTGAGGGCCGAACACTAATGCTCAACGCCACGGCTCAACTGATCAACGGTGTGGCGTTCTCCAAGGACCAGACTGGAGTCACTGTTACTGGTCCTTCGCTCACAATCTCTTTTGATGGCAACACTGCAGTAATCACAGGAGTTGCTACAGCTTCAGAAGGCTTGTGTGGTAACCCCATCAACGCCAGTCAGACCTTCAATCTGGCTGCTGAGAAGACTTTCGCCAGTGTGTTTGGCTGCGAGGTCCTGTACAGCAACACCCCCAACAATACCACCACCTGCAACCTTACAACTGAACGCTGTAATCTCCTGATGCAGGCACCCTTCACCGATTGCCACAGCCAAGTTGACCCAGCTCCCTACATAACCGCCTGTGCAGAAACTTCGTGCAAATTCCCGACCGAGGAAGGCCTCGCTCTCAGCTGCCAGTTTTTTGACGCTTACGCCAAGACCTGCGGTGTGGAAACCAACATCACACTGGGCGACTGGAGGTCACCAACCGTTTGCCctgTCCCTCAGGTCTCCTGTATGGAGCTGTACTGCAGTGATAACGAGTACTGTGACAAGAACGGTGAACCCCAATGCCTCTGTCGGGCTCTTTTTGCCACCAAGTACACACCAACAAACTCTTTAGGCGACCCGACAGTCTGCAATGGGAGCTCTGCCACTCTTACTCTGGCTGGATGTCTGCTCAGCGCCAAAAACATCGACTACACCACCTTACACCTCCTAGACGAGAGCTGCAAAGGGCACATGGACAGCGAGACCCACATGGTGACTTTCAGCTTTGACAGCAGCAACACCTGCGGGACCGAGATCATGAGCAACAAAAGAAGCCAAATAATCTACCAGAACACCATTACGACGCAGAACGGGTCCATGGACATAATCACCCACCAAGACAAAGTCATGATCGACTTCTCCTGCTTGTACACACTGCCAGACCTCACGAGTGTGTCCTTCAAAATCAAAGAgagctcTGTGGTGCAGGAGATTGTATCTGGAATTTGGAATTACACTCTGATGATGAATTCATACACCGACGGCGAATTCCGGACCTCAGTCGGGCCAGACACTGAGCTGGTGCTGGGCCAGGAGGTCTGGGTGACGCTGATGACTGTGGGGCTGAATGACACTATGGTCTCCATAATGACCAACTCCTGCTGGGCGACCAACCAGCCATCACCAAATGAGAGTCTGCGACACGACCTTGTCATCAACGGATGCCCGAACCCTGCTGACCAGACGGTGAGCATGCAGGGAAATGGACTGGGAACATTCAACGTCTTCTCTTTCAACATGTTCCAGTTCTCTGGGAAAGCTGGCGACATCTACCTGCACTGCCAACTGGAGCTGTGCCCCAGCACCTGCCCTCCGAGCTGCAGCGGAGGTGGCAGGAGGCGCAGATCTCGAAGGTCTAAAAGAGCAGATGAAAACCCAGCCCTCATCACTATGGCCTGGAATAATTAAAGACTGCTCCCCTTTTTGATCGATTACATGATGGTTCCTGACTTAAGCTTCGTCCCCATAAAGAGCCTGAGATGTCACTGAGCATCTGAAAGTGGATCATTGATCTTAGCGCTGTGCTTGTGCTATGTTTATGTGGGGACACTCAGACCCCATATAGACTGGGGAATGTTCCTTTGTTTCATAACTACATTTTCCATTGGCTCAAAGTGACTCATGTTAACTGACTCCTGACTTATGGTATGACTGttataaaatgatgaaaaaaataaagtttcagtCCTTCA
>XM_039805912.1
GTTTACTATAACAACCCTGGTCTCCGACACTTTACTGCTGCTACTTCATCATGTTGAAGCCCGTTGCATTGCTCCTTCTGCTGGCAGGTGTGGTCCACACTGTGCCCCACCCTGTGTGCACTGTGACTGCCTCCACCGTCATTGATTTCTTCAACAGAATCCGGTCGGTCCCGGATCGCTGTACATACACACTGATTGGAGATGACACTGTTGTACTAGCAGCGAGATTCCAGGAGCGAAGCCGTACAGATGTGCCGTTTTTGGACTCCTTGCAAATAATTTTAATAGTTTCAACATCTGCCTTGGACGTCTATCGATACCTAGAAATCTATCTTGGACAAGGGGGACTAGTTCAGGTTGAGGGCCGAACACTAATGCTCAACGCCACGGCTCAACTGATCAACGGTGTGGCGTTCTCCAAGGACCAGACTGGAGTCACTGTTACTGGTCCTTCGCTCACAATCTCTTTTGATGGCAACACTGCAGTAATCACAGGAGTTGCTACAGCTTCAGAAGGCTTGTGTGGTAACCCCATCAACGCCAGTCAGACCTTCAATCTGGCTGCTGAGAAGACTTTCGCCAGTGTGTTTGGCTGCGAGGTCCTGTACAGCAACACCCCCAACAATACCACCACCTGCAACCTTACAACTGAACGCTGTAATCTCCTGATGCAGGCACCCTTCACCGATTGCCACAGCCAAGTTGACCCAGCTCCCTACATAACCGCCTGTGCAGAAACTTCGTGCAAATTCCCGACCGAGGAAGGCCTCGCTCTCAGCTGCCAGTTTTTTGACGCTTACGCCAAGACCTGCGGTGTGGAAACCAACATCACACTGGGCGACTGGAGGTCACCAACCGTTTGCCctgTCCCTCAGGTCTCCTGTATGGAGCTGTACTGCAGTGATAACGAGTACTGTGACAAGAACGGTGAACCCCAATGCCTCTGTCGGGCTCTTTTTGCCACCAAGTACACACCAACAAACTCTTTAGGCGACCCGACAGTCTGCAATGGGAGCTCTGCCACTCTTACTCTGGCTGGATGTCTGCTCAGCGCCAAAAACATCGACTACACCACCTTACACCTCCTAGACGAGAGCTGCAAAGGGCACATGGACAGCGAGACCCACATGGTGACTTTCAGCTTTGACAGCAGCAACACCTGCGGGACCGAGATCATGAGCAACAAAAGAAGCCAAATAATCTACCAGAACACCATTACGACGCAGAACGGGTCCATGGACATAATCACCCACCAAGACAAAGTCATGATCGACTTCTCCTGCTTGTACACACTGCCAGACCTCACGAGTGTGTCCTTCAAAATCAAAGAgagctcTGTGGTGCAGGAGATTGTATCTGGAATTTGGAATTACACTCTGATGATGAATTCATACACCGACGGCGAATTCCGGACCTCAGTCGGGCCAGACACTGAGCTGGTGCTGGGCCAGGAGGTCTGGGTGACGCTGATGACTGTGGGGCTGAATGACACTATGGTCTCCATAATGACCAACTCCTGCTGGGCGACCAACCAGCCATCACCAAATGAGAGTCTGCGACACGACCTTGTCATCAACGGATGCCCGAACCCTGCTGACCAGACGGTGAGCATGCAGGGAAATGGACTGGGAACATTCAACGTCTTCTCTTTCAACATGTTCCAGTTCTCTGGGAAAGCTGGCGACATCTACCTGCACTGCCAACTGGAGCTGTGCCCCAGCACCTGCCCTCCGAGCTGCAGCGGAGGTGGCAGGAGGCGCAGATCTCGAAGGTCTAAAAGAGCAGATGAAAACCCAGCCCTCATCACTATGGCCTGGAATAATTAAAGACTGCTCCCCTTTTTGATCGATTACATGATGGTTCCTGACTTAAGCTTCGTCCCCATAAAGAGCCTGAGATGTCACTGAGCATCTGAAAGTGGATCATTGATCTTAGCGCTGTGCTTGTGCTATGTTTATGTGGGGACACTCAGACCCCATATAGACTGGGGAATGTTCCTTTGTTTCATAACTACATTTTCCATTGGCTCAAAGTGACTCATGTTAACTGACTCCTGACTTATGGTATGACTGttataaaatgatgaaaaaaataaagtttcagtCCTTCA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805911.1 True 2233 mRNA 0.50 14 35621760 35630081
XM_039805912.1 False 2110 mRNA 0.51 14 35621921 35630081

Neighbor

gene id symbol gene type direction distance location
ccne2 LOC103358269 coding upstream 75012 35535047 ~ 35546748 (+)
tp53inp1 NA coding upstream 93751 35508333 ~ 35528009 (+)
nagpa NA coding upstream 132283 35448568 ~ 35489477 (+)
LOC120561699 LOC102800167,LOC102194503,LOC101481262,LOC104936483,LOC103358273 coding upstream 259239 35357254 ~ 35362521 (+)
wdr73 csgr05h8orf37 coding upstream 391448 35208147 ~ 35230312 (+)
LOC120562277 NA coding downstream 219392 35849473 ~ 35856736 (+)
LOC120562454 NA coding downstream 245046 35875127 ~ 35883935 (+)
LOC120562276 NA coding downstream 266269 35896350 ~ 35900892 (+)
LOC120563160 LOC104935873 coding downstream 394545 36024626 ~ 36026571 (+)
dek LOC102312342,LOC102210945 coding downstream 462118 36092199 ~ 36110132 (+)
G78645 NA non-coding upstream 43949 35575172 ~ 35577811 (+)
G78603 NA non-coding upstream 90036 35528475 ~ 35531724 (+)
G78607 NA non-coding upstream 123022 35498360 ~ 35498738 (+)
G78592 NA non-coding upstream 228161 35393133 ~ 35393599 (+)
G78588 NA non-coding upstream 231877 35389515 ~ 35389883 (+)
G78653 NA non-coding downstream 12825 35642906 ~ 35643353 (+)
G78655 NA non-coding downstream 18449 35648530 ~ 35691645 (+)
G78662 NA non-coding downstream 87871 35717952 ~ 35718951 (+)
G78669 NA non-coding downstream 145191 35775272 ~ 35813607 (+)
G78674 NA non-coding downstream 191209 35821290 ~ 35821641 (+)
G78594 NA other upstream 213078 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 765228 34839157 ~ 34856532 (+)
G78200 NA other upstream 1077381 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1579112 33990542 ~ 34042648 (+)
LOC120562157 NA other upstream 1717475 33894360 ~ 33904285 (+)
LOC120562275 NA other downstream 113214 35743295 ~ 35773988 (+)
LOC120562279 NA other downstream 235761 35865842 ~ 35888172 (+)
G78759 NA other downstream 480770 36110851 ~ 36190839 (+)
G78772 NA other downstream 628079 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 762171 36392252 ~ 36465230 (+)

Expression


Co-expression Network