pnisr (pnisr)


Basic Information

Item Value
gene id pnisr
gene name pnisr
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 2713443 ~ 2721790 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805966.1
GTGGTGATATTACCGAGCGCCTGTGAAGGCAGCAGCAGCGCCTCGTTTCACACTTCCTTTCCGAGTAGTTGGTGCAGCCATTTTGATTTGGAGCCGCAGCGCTGAGGAGAAACTGTCTGGAAAAGGTGTGAATCCAGAGGAGAGCGATGTGGGACCAGGGAGGACAGCCCTGGCCGCAGTGGCCTCTGAGCCAGCAGCAGTGGATGCAGTCTTTCCAGCACCAGCAAGATCCAGGTCAAGTAGACTGGGCTGCTCTGGCACAAGCATGGATAGCCCAGAAGGAGTCGACAGGACCAGAGCAGCAGAACATTCAGCCTAATGGCCAGGGCATCCCAGGCCTTGAGCCAGTTGGACAGGGCAACCACGGCGCCTTCCAGGGTGACCCAGCATTCGGCAGAATGTGGCAGCCAGAATGGGGAATGCATGGCcagccccctcctcctccaccccctcctcctcctccaccccctGACCAGCCCTGGATCCCCCCAGGGTCCGGACCGATGGATGTGGTGAACCCCAGCGAGGACAGCAACAGCCAGGACAGCGTGGAGTTCAACTCTGAAGCCCACCACGGGGTTTACCCCCAGAACAGCCATGGGTATGGGGCACAGCCCGACAGCTACGCCATGGCCCCCATGGCCATGAACCAGTTTGATTATCAGCATGGAGCTGCCTCATCCTTTGCCCCCACACCCGCAAGCTTCCACTCCCCATACTGGCAGGGTCCTCCTCAGAGCAGACGAGATACCAGACCACCCGGCTTCAGAGAGCGGCCCAGATCCCCTATCCAGCTCCCTGTCAAACAGGAGGCCCCAGCCCTGCTAGATGCAGTAAAAAGGCGCACACTACCTGCATGGATCCGGGAGGGGCTCGAAAAGATGgacagagaaaagcagaagaAGCTGGAGCGAGAACGAATGGAGAAGGAGCGTGCAAAAATGGCCAAAGATGATGGCAAAGAGCACGAGGCCGACGAGGGAGGTGATGGGCCACGTATGCCCCGCAAGAGTAAATTTGACAGTGATGATGAGGAGAATGACGACAACGAAGAAAAGGCCTCTATCAAGAAAGAATTTTCTGGTCGGAGCCCATCGCCTCCTGCAGAGGACAGTGAACCTGAAATGacggaggaggaaaaggagttCCAGCTGATGATCATCACAAAAACCCTACTGACAGAGATCCTTCTCGAGGTCACCAATGAAGAGATCCTGCATGTGGCCAAAGAGACTCACCGGAGAGCCACTCGAGCTCCTGCAAAACAGCTGGCACAGTCAAGTGCACTGGCTTCTCTGACTGGTCTCAGTGGGCTTGGTGACTATGGTTCAGATGAGAGTGAGGACGAGGATGAGCGCAGTGTGCGAGGGTCTGAATCCTCCGACACCGATGATGAGGAGTTGCGCCACCGCATCCGAGAGAAGCAGGACGCCTTCCGCCGCAAAGAGCGGGAGACGCAGCAGCTGCAAGACAAACAAGCACAGGAGGCTCTGCTTGCACGTGAAGAGATGGTGAAGGAGAGATTGATCAGAGAAAAGGGGGATTATGATGAGGGCCAGCCAGAGAATCCACACAAACAGGAAGTAAATGAGAGGGAGGCGGAGCCCTTGGTAGAGAGGCGTAGGTCCCGTAGTGAGAAGGAGGGTAGCGAGAGCAAGCACTCGGGCAGAGGGAAGGAGCGATCCGGGCGAGGCGGCAGCCATTCCCCGGCCAACGGGCACAGCAGCAGCTCCCGCTCCACCTCCAGCCACAGCAGCCGTcgttcttcctcctcctcgtcttcttcttcctctgcaTCGTCCCGCAGTTCATCGCGATCCTCCTCCCCACGGAGAAAGAGGAGGCGTAGCCGCTCGTCCTCCCACAAGGCCCGCAGGCGCAGCCGCAGCCACAGCTCCCACAGGCATCGCAGTGAGAAGGGCAGGGACAGGAGGCGCAGCAGCGCTGAGAGGTCAGGCCGCCACAGGAAAGATCGCAGTGATTCCAGGGAGCGCAGGAGCCGCAGGAGTAGATCCAGATCCAGAGAGCGAGACCGGGCCAGAGCCAGGGCCAGAGACAGCCGCAGTCGcagcagagagagggaaaaggagaaagaaagggaTAAGGAGAGGAAAAGGAGCCGGGATGGCAGAGACAGCAGTCATAGTCGTAGTAGCAAAAACAAGCCGAAGGCTTCcagcaaagacagagagagaaggagggaaaggAGTCATAGCCATGagaaagacaagaaaaagaagGATAAGGATAGGGAGAAAGAGTCAgataaaaagaaggaaaagcCAAAGGccaaagagaaggagaaagaaaaaggaagctCTGTAGTTACAGAGGAGAATGGCAAATcgaagaaaaggagagagagtgaCTCATGCACGGACTCCCAGAGTGACAAGCACTCCCGGCAGGATAGCAAAGCCAGCAAGAGGGGCTCCGCCAAAGCTAGCAAGAAGCGCTCCGATTCTGACTCAAGTAGATCCCCTAGCCCTGAAGTTAGCAAGGAAAAGAAATCTAAAAAATCCAAACGTAGTCGCTCAAGATCGACGGAAAAATCTCACAAGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCGCGATCAAGGTCAACATCCCCCTCCCGTCGTAGCAGACGCTGAGGAGCACAGTTAACCTCCTGATCTGTGCACtttaccattttttttaaattccatgAGTTGAGCAGGCTTGTCTCATTATAGAGGCAGTTGTGTAggtgaaccccccccccccatacatCTTTCATCTTTGTAAAtatgttgttatttttaaaagtgtgaCTGAAGAACAAGATTTTTTGAATGGTAGGAGTTTTCACTTGTATCATTATGCAAAGCTTAATAAGACTCTGTGGACACTAAAAACTCAAGTTGTATCATTTTAAACCGTAACAGGATTAACTTTTTCTCCAAACATTATTGTAAATGTCCAATAAAACTGTTTGTTCCTTG

Function

symbol description
pnisr Predicted to be active in nuclear speck and presynaptic active zone. Orthologous to human PNISR (PNN interacting serine and arginine rich protein).

NR:

description
arginine/serine-rich protein PNISR-like isoform X1

GO: NA

KEGG:

id description
K13170 PNISR, SFRS18; arginine/serine-rich protein PNISR

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805966.1 True 2972 mRNA 0.54 12 2713443 2721790

Neighbor

gene id symbol gene type direction distance location
coq3 LOC106584027 coding downstream 726 2692999 ~ 2712717 (-)
faxcb faxc,LOC102781468 coding downstream 20581 2661896 ~ 2692862 (-)
fbxl4 fbxl4 coding downstream 77785 2613872 ~ 2635658 (-)
mms22l mms22l coding downstream 394038 2294541 ~ 2319405 (-)
LOC120562568 fzd6 coding downstream 487021 2209856 ~ 2226422 (-)
me1 me1,LOC102784256 coding upstream 220936 2942726 ~ 3121115 (-)
snap91a snap91 coding upstream 451188 3172978 ~ 3268101 (-)
dop1a dopey1 coding upstream 548975 3270765 ~ 3333852 (-)
tpbgb NA coding upstream 717142 3438932 ~ 3441121 (-)
bckdhb bckdhb coding upstream 968623 3690413 ~ 3781647 (-)
G70094 NA non-coding downstream 69027 2643873 ~ 2644416 (-)
G70092 NA non-coding downstream 75155 2638062 ~ 2638288 (-)
G70081 NA non-coding downstream 101639 2610352 ~ 2611804 (-)
G70090 NA non-coding downstream 104545 2608242 ~ 2608898 (-)
G69995 NA non-coding downstream 584702 2128471 ~ 2128741 (-)
G70155 NA non-coding upstream 12159 2733949 ~ 2735724 (-)
G70156 NA non-coding upstream 18529 2740319 ~ 2753268 (-)
G70250 NA non-coding upstream 194667 2916457 ~ 2916861 (-)
G70253 NA non-coding upstream 211927 2933717 ~ 2934064 (-)
G70249 NA non-coding upstream 219132 2940922 ~ 2942118 (-)
zfpm2a zfpm2 other downstream 852277 1725158 ~ 1861166 (-)
osr2 osr2 other downstream 1980687 728485 ~ 732756 (-)
usp45 usp45 other upstream 5378 2727168 ~ 2818027 (-)
G70407 NA other upstream 907343 3629133 ~ 3629818 (-)
LOC120563202 NA other upstream 1257521 3979311 ~ 3979414 (-)
eny2 eny2,LOC100692744 other upstream 1350534 4072324 ~ 4077811 (-)
cep76 cep76 other upstream 1640205 4361995 ~ 4445053 (-)

Expression


Co-expression Network