rwdd1 (rwdd1)


Basic Information

Item Value
gene id rwdd1
gene name rwdd1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8114521 ~ 8121326 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805973.1
ACTGTTAGCCGTGCCAGGCCAGAGAGGCAGAATCCCGACATCATCGATCACCATTGGGCAGGTGGAGCAGTGCACGCAGCAGCCGtgtgttagcttagcttatctTAGCATAGCGGGATGATTGGTCTAATTTACAGATAACCTGCAGCCACACCAACATGACGGACTACTCGGAGGAGCAGAGGAATGAACTGGAGGCGATAGAGTCCATCTACCCGGACTCTTTCACAGttCTTTCAGATGAGCCCACCAGCTTCACCATCACCGTGACATCGGACGCAGCGGAAAACGGGGAAACCGTGGAAGCGACCTTAAAGTTCACATATGTGGAGAAATACCCAGACGAGGCTCCGCTGTGGGAGATCCACTCGCAGGAGAACCTGGAGGACAGCGACGCCGAGGACATCCTCACCTTACTGCAGCAGCAGGCAGACGAAAACCTGGGCATGGTGATGATCTTCACCCTGGTGACGGCCGTCCAGGAGAAACTCAACGAAATGGTGGACGTGAAGAAAAACCGACGGGAGGAGGAGGCGCGGCGGAAAGAGGCCGAGGCCGAGGAAGCAGAGAAGgtgTTGTTTCAAGGCACAGTGGTAACCATTGAAAACTTCCTGGCGTGGAAAGCCAAGTTTGAACTGGAGATGGCCGAGCTGAGGAGGAAACGACAGAAAGAAGAGGAGCAGGCAGGGAAACCCAAACTCACCGGTAAACAGCTGTTTGAGACCGACCACAACCTGGACACCTCTGACATCCAGTTCCTTGAAGACACTGGAAACAACGTTGAAGTGGACGAGTCCCTGTTCCAGGACATTGAGGACTTGGACTTGGATGAGGACGACCCTGACTTTGACCCTTTAGAGATGGGGAGCGATGAGGACTAAAGCAGGACTGCTGGGGGACGGACAGCACCGTCTCTGGAGTCCGATCGAGCAGACCCAGTTCCTTTTCAAAGACTCTGACAGCAGTTGGAGAGGGaaacttcataaaaaaaaaaaaacaacccataCATAATCACCCACCAGTGTTCTTTTCTCTGCCTGAACTATTAAATTGACAAACCAAAAGTGTGACTGGCTCCGGTGCTGTTTGACATGCAGGACATCCAGTGACAGGCCAGAAGAGGGCAGCAACGTCTCAAATATTCAGAGAGTTTACTGACATTAAAGTAGCAACGTCCCAATATAAAAGTATACTTCAGTACGA

Function

symbol description
rwdd1 Predicted to be involved in cytoplasmic translation. Predicted to be part of polysome. Orthologous to human RWDD1 (RWD domain containing 1).

NR:

description
RWD domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805973.1 True 1203 mRNA 0.52 7 8114521 8121326

Neighbor

gene id symbol gene type direction distance location
LOC120561725 fam26e,LOC103478772,LOC106963711 coding upstream 5156 8104864 ~ 8109365 (+)
LOC120561897 NA coding upstream 9672 8104249 ~ 8104849 (+)
LOC120561724 fam26e,LOC103478772 coding upstream 10129 8096361 ~ 8104392 (+)
LOC120561722 NA coding upstream 18229 8091652 ~ 8096292 (+)
LOC120561723 NA coding upstream 24862 8083900 ~ 8089659 (+)
zgc:114181 LOC104932954,LOC102799802,LOC101469313 coding downstream 65961 8187287 ~ 8198861 (+)
pomgnt2 pomgnt2 coding downstream 243030 8364356 ~ 8384620 (+)
LOC120562241 NA coding downstream 333438 8454764 ~ 8504452 (+)
LOC120562991 LOC103388880 coding downstream 966858 9088184 ~ 9101502 (+)
popdc3 popdc3 coding downstream 994385 9115711 ~ 9123087 (+)
G71226 NA non-coding upstream 3096 8103284 ~ 8111425 (+)
G71220 NA non-coding upstream 45397 8068055 ~ 8069124 (+)
G71201 NA non-coding upstream 53720 8060110 ~ 8060801 (+)
G71211 NA non-coding upstream 54716 8049035 ~ 8059805 (+)
G71200 NA non-coding upstream 66852 8046950 ~ 8047669 (+)
G71306 NA non-coding downstream 6373 8127699 ~ 8152466 (+)
G71305 NA non-coding downstream 10923 8132249 ~ 8132787 (+)
G71323 NA non-coding downstream 77627 8198953 ~ 8199908 (+)
G71325 NA non-coding downstream 95351 8216677 ~ 8236718 (+)
G71326 NA non-coding downstream 106509 8227835 ~ 8310764 (+)
G71147 LOC103388722,LOC104941093,LOC103369890 other upstream 313141 7731022 ~ 7801380 (+)
znrf2b znrf2 other upstream 614339 7456767 ~ 7500182 (+)
cdk14 cdk14 other upstream 822086 7039163 ~ 7292435 (+)
G70894 NA other upstream 2153667 5960455 ~ 5960854 (+)
si:ch211-198c19.1 NA other upstream 2519621 5591199 ~ 5594900 (+)
G71309 NA other downstream 275 8121601 ~ 8122239 (+)
ano10a ano10 other downstream 162054 8283380 ~ 8309744 (+)
G71470 rrp15,LOC106584165,LOC106605018 other downstream 627617 8748943 ~ 8751443 (+)
LOC120561899 LOC104959271 other downstream 638720 8760046 ~ 8776508 (+)
trnay-gua_1 NA other downstream 689025 8810351 ~ 8810439 (+)

Expression


Co-expression Network