Gene
RNA
| Item | Value |
|---|---|
| gene id | gapdhs |
| gene name | gapdhs,LOC106526031,LOC103369915 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 12773881 ~ 12777726 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| gapdhs | Predicted to enable glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity. Predicted to be involved in glycolytic process. Predicted to act upstream of or within glucose metabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in several structures, including cardiovascular system; digestive system; female organism; nervous system; and neural tube. Human ortholog(s) of this gene implicated in Alzheimer's disease. Orthologous to human GAPDHS (glyceraldehyde-3-phosphate dehydrogenase, spermatogenic). |
| description |
|---|
| glyceraldehyde-3-phosphate dehydrogenase isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006096 | glycolytic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0050661 | NADP binding | molecular_function |
| GO:0051287 | NAD binding | molecular_function |
| GO:0004365 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039806042.1 | True | 1232 | mRNA | 0.53 | 8 | 12773881 | 12777726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hpn | hpn | coding | upstream | 96891 | 12659516 ~ 12676990 (+) |
| LOC120561578 | NA | coding | upstream | 124048 | 12641939 ~ 12649833 (+) |
| sdha | sdha | coding | upstream | 206217 | 12555942 ~ 12567664 (+) |
| zmp:0000000930 | NA | coding | upstream | 223923 | 12548020 ~ 12549958 (+) |
| mrpl32 | NA | coding | upstream | 227408 | 12544496 ~ 12546473 (+) |
| LOC120561926 | NA | coding | downstream | 2489 | 12780215 ~ 12782230 (+) |
| tmem147 | tmem147,LOC106605633 | coding | downstream | 6093 | 12783819 ~ 12788550 (+) |
| LOC120562668 | LOC103369917 | coding | downstream | 24750 | 12802476 ~ 12807616 (+) |
| LOC120562667 | LOC103369917,LOC102193495,LOC101464842,LOC108232169,LOC101465138,LOC102300261 | coding | downstream | 30355 | 12808081 ~ 12819134 (+) |
| ncam3 | LOC104959682 | coding | downstream | 65035 | 12842761 ~ 12848460 (+) |
| G72036 | NA | non-coding | upstream | 134092 | 12639314 ~ 12639789 (+) |
| G71995 | NA | non-coding | upstream | 140108 | 12502511 ~ 12633773 (+) |
| G72117 | NA | non-coding | downstream | 504 | 12778230 ~ 12778442 (+) |
| G72129 | NA | non-coding | downstream | 38411 | 12816137 ~ 12820820 (+) |
| G72134 | NA | non-coding | downstream | 48925 | 12826651 ~ 12883769 (+) |
| LOC120563130 | NA | non-coding | downstream | 70749 | 12848475 ~ 12851077 (+) |
| LOC120562936 | NA | non-coding | downstream | 118584 | 12896310 ~ 12945988 (+) |
| LOC120562335 | NA | other | upstream | 442 | 12760817 ~ 12773439 (+) |
| LOC120563165 | scx | other | upstream | 44655 | 12711602 ~ 12729226 (+) |
| LOC120561922 | NA | other | upstream | 1063623 | 11708381 ~ 11710258 (+) |
| G71896 | LOC103388795 | other | upstream | 1157639 | 11599037 ~ 11616242 (+) |
| mbpb | mbp,LOC104918400 | other | upstream | 1174655 | 11537184 ~ 11599226 (+) |
| G72204 | ctnnb1,LOC103388302 | other | downstream | 347208 | 13124934 ~ 13125897 (+) |
| hint3 | hint3 | other | downstream | 467942 | 13245668 ~ 13250110 (+) |
| prelid3a | prelid3a | other | downstream | 690485 | 13468211 ~ 13471516 (+) |
| LOC120562530 | ext1,LOC103135121 | other | downstream | 782034 | 13559760 ~ 13606245 (+) |
| LOC120562711 | eif3h | other | downstream | 846722 | 13624448 ~ 13688514 (+) |
