LOC120562356 (ttc24)


Basic Information

Item Value
gene id LOC120562356
gene name ttc24
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39901765 ~ 39923149 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806072.1
GTGACAGCCATCCATCATGTATTCAGCAGGAGAGGAAAACATCTTACGGCTCAATATGGAGGAACTACATCTTCTTCACCTGACTGTGTCCAGGTGAGTCATCCTGCAGGTCGTCATGGCGACTGCTCCAGGTAAGGATGAGGTGAagctgaagaagaagaggaagaagaggatgaaGGACATCGAGGAGTTAACGTCTGCGGGACACAGAGCTCTGCAGGACGGCCGCTCTGAACACGCTCTGAGCTGCTTCAACAGCGCTCTGAAGGCTGCAGCACAGCTGCAGGACTCCCGAGTTGTCGGAGCCTGCTCCTTTAACCTCGGCGCCGCCTACGTGGAGGCGGAGCAGCCGGAGAAAGGTTTGGACTTCCTGCGTCAGGCTCAGCCCGGCCCGAAGGCTGACCGGCTCCCGGACCTGCAGTTCAACCTGGCTCTGGCCCACAATGCACTGGGGCAGAGACGAGAGGCCGCGGCCTACTTCCTGCAGGCCGCTCAGCTGTACAGGTCTCAGGGAGACGGACGCAGCGAGGGAGACGCCTGCATGGAGATGAGCCGCTGCTACAGCACGGACAAGgattgGGTTCTTGCTGCCCAGAGTCTACTACGTGCTGCAGAGAGTTACAGAGTGGCGGCCATGTCGGATTCTGCAGCCGCTGCCCTCAAAGAGGCGGCAAGTCACATGATCCAATCAGATCAGTTCAGccgtgatgacatcatcagcgTGCTGACAGAGTGTCTGAGTTTGACAGACAGCATCACCGACCCGAGGATTCTGGGTGAGCTGTACCTGTGCGTGGGCGTGTCTTACTGCCGGCTGCGGTGTTTCCAGGAGGCCGTGGCGTGCCTGCAGCGAGCCCTGAGCCCTGCAGCTCAGCAGCCCCCCCTGCTGGCCAGAGTGCTGCACAACCTGGGAGCCGCCCTGAACTCTGCCGGACGCTTCCCCGCCGCCGTGGGCTACCACCGGCTGGCTGCCGGGCTCTACGgctCCCTGGGTTGCCGTGGGGACCAGGCCCGGTGCTTCAGTAACTTGGGGTATGCCTGCAGTCAGCTgggtgatgaagaggaggcagcAGAGAGCTTCATCCTGGCTCTGCAGGGCTTCAGAGACACCGaggACCACCTGTCTGAGGTTCAGGTGTGTGAGTCGTTAGCAGAGTGTTACCTGAAGCAGAGGAAGCAGCAGAAAGCTGTTCAGCTCTACAAACAGGCTTTGAAGGCTCTGTCTCACTGCCAGGACAGTTCTGGTTCAGCTCGGGATCATCTGGTGGAGCGTCTGACTGCAGCCCTGCAGCAGAGTCTGCAGAGGCCACGCCCACTCAGACCACCTATCAGGAGGAATGACATCACTCAGAGTCCAGGCACAGCGTCCAATCAGCAGCCAGACGATCAGAGGGGGGAGGGGCCAGACTCACAGCTGGAGGCCGCAGGcagacaggaagcagcagaGCATTGTGGGTCAGCAGGAGGAGCCTCTGAGGAACCTGAATACATGAGCATGGTACCTGGactacacagTTCAGAGCAGTCGGAGGAGCGGCTGCAGAGCAGTGAGTCCtgacttcttcttctctcctgtaATAAGATGTTCCAC

Function

symbol description
ttc24 Orthologous to human TTC24 (tetratricopeptide repeat domain 24).

NR:

description
PREDICTED: tetratricopeptide repeat protein 24

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806072.1 True 1591 mRNA 0.59 13 39901765 39923149

Neighbor

gene id symbol gene type direction distance location
LOC120562358 LOC101076950 coding downstream 58589 39833153 ~ 39843176 (-)
LOC120562487 NA coding downstream 759060 39107304 ~ 39142705 (-)
trim33l NA coding downstream 956590 38908049 ~ 38945175 (-)
LOC120563017 NA coding downstream 1402108 38489974 ~ 38499657 (-)
LOC120562484 NA coding downstream 1416900 38482155 ~ 38484865 (-)
LOC120562362 NA coding upstream 202276 40125425 ~ 40175116 (-)
LOC120562374 NA coding upstream 257193 40180342 ~ 40201133 (-)
LOC120562375 NA coding upstream 322236 40245385 ~ 40252154 (-)
tmem79b NA coding upstream 431485 40354634 ~ 40364184 (-)
pmvk pmvk coding upstream 556917 40480066 ~ 40487346 (-)
G80064 NA non-coding downstream 34560 39865769 ~ 39867205 (-)
G80043 NA non-coding downstream 123671 39713211 ~ 39778094 (-)
LOC120562369 NA non-coding downstream 202812 39698204 ~ 39698953 (-)
G79896 NA non-coding downstream 399555 39502000 ~ 39502210 (-)
G79894 NA non-coding downstream 401181 39499399 ~ 39500584 (-)
G80084 NA non-coding upstream 49231 39972380 ~ 40036556 (-)
G80087 NA non-coding upstream 54513 39977662 ~ 40093267 (-)
LOC120562370 NA non-coding upstream 58380 39981529 ~ 39985052 (-)
LOC120562371 NA non-coding upstream 75851 39999000 ~ 40068655 (-)
G80095 NA non-coding upstream 100670 40023819 ~ 40024480 (-)
G80046 NA other downstream 40217 39779384 ~ 39861548 (-)
G80027 NA other downstream 323826 39576663 ~ 39577939 (-)
G79872 NA other downstream 445126 39396261 ~ 39456639 (-)
G79820 NA other downstream 763383 39097772 ~ 39138382 (-)
G79767 NA other downstream 993744 38906780 ~ 38908021 (-)
LOC120562372 NA other upstream 279890 40203039 ~ 40234663 (-)
G80129 NA other upstream 299218 40222367 ~ 40307523 (-)
G80186 NA other upstream 569174 40492323 ~ 40497596 (-)
LOC120562415 NA other upstream 755194 40678343 ~ 40765467 (-)
G80488 NA other upstream 1092701 41015850 ~ 41017192 (-)

Expression


Co-expression Network