LOC120562358 (LOC101076950)


Basic Information

Item Value
gene id LOC120562358
gene name LOC101076950
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39833153 ~ 39843176 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806073.1
AGAGGAGAAACATTCAGAGCTGCTGATCAGgATGTCAGGTAACTGGTCCATCGTGCAGCTGGCTCCGCCCCCTCCCAACTCCTCCCAGTTCCCCCCTCTCTCAGACTGGGAGGCTCCCAGCTTCACCCGGGCCGCCATGTTCCGTGTGGGCGCCACGCTGCTCTTCCTGTTCGCCGCCGCCAGTAACCTGGCCCTGCTGGCGAGCGTGTGGTGCGGGCGTGCCCGGCGGCTGGCGTCCCACCTTCGGCCGCTGATTCTGAGCCTGGCGGCGGCCGACCTGATTATGACGTTCGTGGCGATGCCTCTGGACGCGGCGTGGAACGTGACTGTGCAGTGGTACGCCGGGGACGCGCTCTGCaagctgctctgctttctgaAGCTGTTCGCCATGCACGCCTCTGCCTTCATCCTGGTGGTCATCAGCCTGGACCGCCAGCACGCCATCCTGCGCCCGCTGGACGCTCTGAACGCACACCAGAGGAACCGGCGCATGCTGCTGCTCGCCTGGAGCCTCAGCCTGCTGCTCGCATCGCCACAGCTGTTCATCTTCCGGGCCATCCGGGCCGAGGTCGCCGACTTCATTCAGTGTGCGACTCACGGCAGCTTCAGCCGCCGCTGGCAGGAAACGGTTTACAACATGTTCCACTTCATCACGCTGTATGTCGTCCCGCTGCTGGTGATGAGCTGCTGCTAcagccgcatcctgctgcacaTCCACCTGCAACACCGCAGaaacacagCAGGTGAGTCCTACCTGAGGCGCAGCGGCACTGACATCATCCCGAAGGCTCGGATGAAGACTCTGAAGATGACGCTGGTCATCGTGCTGTCCTTCGTGGTGTGCTGGACGCCGTACTACCTGCTGGGCGTGTGGTACTGGTTCCAGCCTGCCGTGCTGCGCGCCACGCCCGAGTACGTCCACCACTTCCTGTTTGTGTTCGGGAACCTGAACACGTGCTGCGACCCCGTGATCTACGGCTTCTACACGCCATCGTTCAGGGCCGACCTGGCCGCCTGCTGCCAGCGCCGCCGCCGCGGGGCGAGACGTGACGCAGCGGCGGCGTCTCCGGACAGATTGGGTCCTCACAGCGGGGAGCACGAGGCCCAGCACGCCACCAACAACCAGGAAGGAGACTgatgctgaccaatcacaggaaGGAGACTgatgctgaccaatcacaggaaGGAGACTAGACCATGATAGCCTCAAaacagctatttttaaaacactaagaaggctcgacacaacatgagactttgctccaagtatcaccaggggctctacacatgaacgaaagcattgacaacattggttgtgttcacagagtttactaaaaagaggtTTTGAGTAAATCACCGTAGCTCTGGTTGTTTCCGGCcgctaccacctcggcagtcaaaatgagtcgatatccgaatgtgaatgaacaga

Function

NR:

description
PREDICTED: gonadotropin-releasing hormone II receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0097211 cellular response to gonadotropin-releasing hormone biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004968 gonadotropin-releasing hormone receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806073.1 True 1432 mRNA 0.60 5 39833153 39843176

Neighbor

gene id symbol gene type direction distance location
LOC120562487 NA coding downstream 690448 39107304 ~ 39142705 (-)
trim33l NA coding downstream 887978 38908049 ~ 38945175 (-)
LOC120563017 NA coding downstream 1333496 38489974 ~ 38499657 (-)
LOC120562484 NA coding downstream 1348288 38482155 ~ 38484865 (-)
LOC120563005 NA coding downstream 1358593 38472146 ~ 38474560 (-)
LOC120562356 ttc24 coding upstream 58589 39901765 ~ 39923149 (-)
LOC120562362 NA coding upstream 282249 40125425 ~ 40175116 (-)
LOC120562374 NA coding upstream 337166 40180342 ~ 40201133 (-)
LOC120562375 NA coding upstream 402209 40245385 ~ 40252154 (-)
tmem79b NA coding upstream 511458 40354634 ~ 40364184 (-)
G80043 NA non-coding downstream 55059 39713211 ~ 39778094 (-)
LOC120562369 NA non-coding downstream 134200 39698204 ~ 39698953 (-)
G79896 NA non-coding downstream 330943 39502000 ~ 39502210 (-)
G79894 NA non-coding downstream 332569 39499399 ~ 39500584 (-)
G79892 LOC106585230,LOC106577920 non-coding downstream 335551 39497150 ~ 39497602 (-)
G80064 NA non-coding upstream 22593 39865769 ~ 39867205 (-)
G80067 NA non-coding upstream 74945 39918121 ~ 39918728 (-)
G80084 NA non-coding upstream 129204 39972380 ~ 40036556 (-)
G80087 NA non-coding upstream 134486 39977662 ~ 40093267 (-)
LOC120562370 NA non-coding upstream 138353 39981529 ~ 39985052 (-)
G80027 NA other downstream 255214 39576663 ~ 39577939 (-)
G79872 NA other downstream 376514 39396261 ~ 39456639 (-)
G79820 NA other downstream 694771 39097772 ~ 39138382 (-)
G79767 NA other downstream 925132 38906780 ~ 38908021 (-)
nudt17 nudt17 other downstream 1152673 38666267 ~ 38680480 (-)
LOC120562372 NA other upstream 359863 40203039 ~ 40234663 (-)
G80129 NA other upstream 379191 40222367 ~ 40307523 (-)
G80186 NA other upstream 649147 40492323 ~ 40497596 (-)
LOC120562415 NA other upstream 835167 40678343 ~ 40765467 (-)
G80488 NA other upstream 1172674 41015850 ~ 41017192 (-)

Expression


Co-expression Network