LOC120562359


Basic Information

Item Value
gene id LOC120562359
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39811855 ~ 39828704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806074.1
ACCGTCAGAGTCTCAACATGAACGTCTGTCCCACTTTGAtctgcttcttcttcctctCTCTGCAGGATGGAAACCCAATTGATATCTACTTGCAGACTGAAGGAGGAGATATAGGAGTTTATTGCTACTCTCCTTCATCTGGAAACACAACGTTCTTCTGTAAGAATGAATGTCAAGGAAAAGGAGACCTTCTCATTGAAACAAGCAGTGACACAGCTCAGAGCGGCAGATACGGGATTGAACATGAAACACTAATAGCAAACACTTCTGTAGCCGTCAGCATCTCCCAGCTGACCAAGTCTGACTCTGGGCGGTACAGGTGTGGTCTAAACAAATCTCTGTCTTCACATTCATACAGCGACTTTGAAATCATTGTTGTAGATGCACTGCTGGCAAGAAATCCTCCTGAAGTAAAAACCTTCTATAAGACACCTGGAGATAGCGTCATCGTGTCatgcttcttttctctctctggaaGCAGGAAGTACTTCTGTAAGGAACAATGTGAAGACAAAGACATTCTGGTTCAAACAACCAATGTCAGCACTCAGAGAGACAGATACGGCATCAGATATGTGGAAGGATCTGTGTCAGGAGGATATCTGTATGTGACCATCTCCCAGCTGACCTGGTCTGACTCAGGACGCTACAGGTGTGGTCTGAACACATCTTTCTCTCCAGATCCTTACCAAGAGTTTAGGGTCGCTGTCACAGATGCTGAGACTTATGGTGTGCTGCTGTATTTGGTCGTGACTCTTctcatcattgtcatcatctCTGTGCTGGCGCTGACGATCATCTGTATTCGGAGAAAGTGCAAACCCAACGGTTCCGCTGGAGGACAGTCAGATGGCCTGAACTTAAAGGTTCCTCAGGTTGCCCCACATTTCTACAATGAGAACTGTAATCCAGTCTTCATCTTAGAAAACTCCACCTACATGAACCTCGATCCAGCCACCAGGGATAAGAACCAAAGCTACTGTACAATCTCACAAATACGACACACATGAGCTGGAgcgtagggctgggtatcactGATTTCCTAAATCAATCCTGATTCCGATTCTCAGCGTCCTGATTGGATTACatttctgattggctatcaATCAGGTTAGGGAATTTCAGTTCCAATCCCAGTTTATCtcgatataaaagagattctcaaacaacttctgctgtaaattgtacCAAGCAAGAAGCAACAATATATTTTATGATGCACCAGgttcatgtttacattaagaactgAGGCCTTAAAAAGTTTGATTAAaagactttttacttctccaTCCATTGTGAAAAGGCAGATAATATAAGACCAACTTTCTGGAATTAAATAAGTGATATCAGATCACTTCAAGCGTCCAGTTTGTGCTCAGTGTGCTGCATTTAGAGAAAAATGGTACACTGCAAAGACAAAGCAGAAGCCAATTACTTCTGTATTTTCAGTGCATTTCTTAATGCAATGTGTATGTTGTTAAATTGGAGAATGTGTTTCTCATTTTGCTGGAGTGTTACTTCTTCgcagtgtgttttatttgcatgtgttttcttggGTTGCATTTCGTTGATCTCTTTGGGCCACTGTACATTTGTAGTCAATGGAGTTTCTTTTACATCTTCAATTGTGACACGTTATCTAAATTTATAATTAGGGTCTGAACACCAACCATGTCAGTTGGTGAAGGTCCAATGCAATCTCTCTGTTTATGAATCACAATTCTGACAGGCTATAGGTGCtcaaaaaatttaaacattGCCCATGTATCAGAAGTGGCGACCATTGACATCTGATGAGTGTCTCGGGCTGGAGTCTGGTAAATTGGCTCTTTAGCCACCCCAACAGCAAGTCAGCTATATTGAATTTACTTTGCCAATTTTGGAGAAAAGAATTACCATTTCCAGTTTTTGTACTTTAACATACTCCTACATATTTAACTCAATGTACCTCTAAATGCGCAGTACAATGTAAAGACCTTGGCAAAGCTAAATTGCGAAGCTTTTGAGTTTCTGTCCAGCAGCATGGGTGTAGTAGGGTGTTGAACTTCCATGTTACACCGCAAACAGGAACTACTTATTACTAGAGTGTACATTGTTCAATCTGCCCCTAATTTCTCATGCAGAATAACAGTCCAGGTCTAATGACATACACATGGGGAGTGATTATATTACAGTcatagcgccacctgctggcaacaggaagtcagcTTCATGTGACAAACAttatccgatttacatgaaattgACAATGTGTGGTCTAAACATTATATAGAGCAACATAATGCAAGTCATCCAACATTTGTAATCATAATCTCCAGCGCCTGGCACTTTCACTGCACGATGGTCACCACAACGCAGGGCAACGTCAACGGcatttgttttctccagaattATAATACTCTTGAATGCATTTCCTACATACCTTCTTCATGTATTTATCTCTTTATCAGCTCTCGTTTGGCTCTCAATGAAGGCGGTCGcatttttctccctctccttcccgTTTCCTGCCCTGCTTTGCTCTCTCGTctagtctttgtctctgtgtactcttagagtctctctctctgcactgctcCTAAATTAAGAATTATGGATTTGATCAACTGGTCTCTCAGCGCAATTGACACCATCGACAAGAAGCTCGGGTTCGGGGGAACCCGACTGCCTTGCCGGAACGTTTGCAGCTGGCTACACGATGGACGCGTGGGAGAGGTGGCGGGTCGTGTGTCTGGCGGTTCTTTCCGTGGAGGACATTGAAGATATCTACCTATTCGGAACCATGATAACAGgtcttttgctgattggctcaggcaTTGCCCTGGTTTATCGAGAAATTAAAAAGAAGACGGGAACCGAGCTAAATACCAGGCTGCCCGTCATGGTTgaagctgtgggcagagctgtcGGAACTCAAATTGTGACTCTGAACTCCATGAGCCACAAATTGGATACTGTGATTACCATGGGCCAACAATTGGATACCATCTTGATGAGACTGTCAGCTCTGGACAAACTGGACAACATCTTGGGGAAACTCACGGTTTTGGCATGGAAATTTGATCGATATGGAGACCAGAGGGGACACTTCAGAGAAGTCGAGAGTGACTAACTGCGGCTCCTCGCCCCaaggcaaaacaaattccaatcttATCTTTTCGGCTCCTGAACCAGCGCTGGCCTTGGCCAAGGCCGGTGTTGAATACTCACTCCCCCTGGAGCACTACAGCGAGGCACACTCTTGCGCTCCTTACCCGACTCCCACAGACACCTGTTGATTGTTGACTCGTACGGGTCCTGTTTCAGggctgactccatggcaaccggctGTGTATCGCTATGTCAATCGTGCGGACTGAGAAACCCAGATTACGGGGGCCAGACGTAGCTTGACTActcaggcctacacacacacaaactcttacatatatacagatatgcaatcaccccccaccccctatCCAGTGCCTTCACAGCTTCTACCCCCAGTCAGGCGGGCGGGTCTGGGACCAGcgcctttgtttggctgcaggaccagatgtctGCTTGCCTGTGCTGGACTACCTCAACCCCAACACCCTCATCCCCATGCACCCaactccccccccaccccccctccatTGCGTGTCTTGTGTGCCCTTGTACTGGTTATGTGCTTATATTatgttgctgaggtgtttttttcctgttcccaaaCTGTACTCCTACTggggcatagtctgggagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806074.1 True 3727 mRNA 0.45 6 39811855 39828704

Neighbor

gene id symbol gene type direction distance location
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding upstream 7968 39781236 ~ 39803887 (+)
LOC120563008 NA coding upstream 384735 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 392182 39391948 ~ 39419673 (+)
LOC120562489 NA coding upstream 533352 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 781021 39020810 ~ 39030834 (+)
LOC120562496 LOC103369586 coding downstream 95621 39924325 ~ 39979365 (+)
LOC120562361 LOC103369586 coding downstream 254326 40083030 ~ 40093260 (+)
si:dkey-15h8.17 NA coding downstream 282729 40111433 ~ 40113823 (+)
LOC120562363 NA coding downstream 311029 40139733 ~ 40152085 (+)
LOC120562376 LOC103369584 coding downstream 440244 40268948 ~ 40289601 (+)
G79921 NA non-coding upstream 28730 39717065 ~ 39783125 (+)
G79923 NA non-coding upstream 31990 39761259 ~ 39779865 (+)
G79918 NA non-coding upstream 33761 39713213 ~ 39778094 (+)
LOC120562367 NA non-coding upstream 87871 39723490 ~ 39723984 (+)
LOC120562368 NA non-coding upstream 93016 39714930 ~ 39718839 (+)
LOC120562365 NA non-coding downstream 37073 39865777 ~ 39869961 (+)
G79944 NA non-coding downstream 186855 40015559 ~ 40037161 (+)
G79953 NA non-coding downstream 201671 40030375 ~ 40099065 (+)
G79957 NA non-coding downstream 228309 40057013 ~ 40108481 (+)
G79960 NA non-coding downstream 291466 40120170 ~ 40120511 (+)
LOC120562364 LOC108234077 other upstream 40435 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 348014 39460448 ~ 39463841 (+)
G79713 NA other upstream 357563 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 465423 39312639 ~ 39346432 (+)
LOC120562498 LOC103369894 other downstream 462278 40290982 ~ 40345060 (+)
G80003 NA other downstream 488035 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 549978 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 816955 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 1179263 41007967 ~ 41012619 (+)

Expression


Co-expression Network