LOC120562361 (LOC103369586)


Basic Information

Item Value
gene id LOC120562361
gene name LOC103369586
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40083030 ~ 40093260 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806075.1
TCCTCAGGAGAGTCTTCTTCGTCAGCTGATCCAGGATCTGAGGTTTCTCTGACTCTCACCAACAAGTTTGACATCTTCAACGAGTCTGAGGACAGACCAGATGCCAGAGGACTGGTGAGcACCAAGCAGCTGATCATCGATGTCCGTCAGGTGACTCTCTGACAGACATGCTGAGAACCTCTGTGTCACATgaccagGAAGTGTGTCATGATTGGCTGATACAGCGGCGAGCTCGGCAGGACGCCCGCACGCCTGACAAGATGAAGACGAACGAGTCGCTGGTCGCCAACGGCAACCTGAGtttggaggagaagaagaggaagatccTGAGATGTCTTCGTCGTCTGGAGGGACTCGGAGTCCTGAGAGCCCCCAACCCAGAGGACCAGATCCTGCAGACGATCGCCAagGACATCCGTCAGCAGCGTGTGCACCGCCAGCGGAGAGGGGTGGAGCTTCAGAAACTCCGTCAGACTCTCAGCAGCCTGCAGGACAAGAGCAGCTTCCACAGCCAGCAGGTGGACTACTACAGACATtacatcacttcctgtctggACCACTTGACTCACAGcagTAAATCGACCAATAAGAAGAAGCTTCCTGCTCTGAGCAACGCCGCCGCCAGGCTGCAGGAGAAAGGAGTTCTGGTGGAGATCCAGGACCTGCCAGCTacacaGTTTAAGAACGTGGTCTTTGACATCGTCCCTGGACCGGAGAAAGGAACATTCAACGTCAAAGCTCGATTCCTCGGCATCGAGATGGAAGAGTTCCCGCTCAAATACCAGGATCTATTGCAGCTGCAGTACGAAGGTGTGGCCGTGATGAAGATGTTCGACAAAGCCAAAATCAACGTCAACCTGCTCATCTTCCTCCTCAACAAGAAGTTCTTCAAGAAATGAAGTCCTGCTCTTCTTCTACTCTCCTATCTCTGGTTTAATATCTACAACAGAGTGACCCATCCTCTCTACTCTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTAATATCTACAACGGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACGGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCCTCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACGCTCCTATCTCTGGTTTAATATCTACAACAGAGTGACCCATCCTCTCTACGCTCCTATCTCTGGTTTTATATCTACAACGGAGTGACCCATCCTCTCTACTCTCCTATCTCTGGTTTAATATCTACAACAGAGTGACCCATCCTCTCTACTCTCCTATCTCTGGTTTTGTATGCTactacatcatgttttaatatatCTCATAACTAACTAACCAATCAGCTAAGCTTTATCAACATGTTATTGCTGCATTATTGCACATTTTAATAAGGGAACCAAATAGTTAAATAATCATGAGACAGGGTTAGTGTTGGGCATCTTCTCTACACTCCTATCTCTGCTGTTATGTCACTACGttatcttttatatatattatatatctatcTCTATATACGTCACTGtacttgtgtttgtctctcacTCTCAACGTGTAGTTCTGcttcctgtctgtgttttaATCTCACTAGAGTTTAAACAGAGTGAAGCATCTTCTCTACACTCCTATCTCTGTTTTTATACGTATATTCtatgtttcctgtttttatttcctgCTAATcagacagagtgagacatcccTCTGGCTCCTATCTCTGCTCaggtttattattaataaacagACACCAGCTGATAATTTAAGAGATATCATGTACCTTCAACACTAGTCTTATTTTGGAGGGTGTAGTTTCTTCGAGGCCATAAATCAGGAACCAGAATCTGAGTTATGATATGATCTTtgagtttaaatacattttagaaaagaagCTGCTCTGATCTATAACTGTACATATTTTCTGTcactttctgttttctctcttttacttttctttttgaagcatgttaataataataaattgaatttctGT
>XM_039806076.1
TCCTCAGGAGAGTCTTCTTCGTCAGCTGATCCAGGATCTGAGGTTTCTCTGACTCTCACCAACAAGTTTGACATCTTCAACGAGTCTGAGGACAGACCAGATGCCAGAGGACTGGTGAGcACCAAGCAGCTGATCATCGATGTCCGTCAGGTGACTCTCTGACAGACATGCTGAGAACCTCTGTGTCACATgaccagGAAGTGTGTCATGATTGGCTGATACAGCGGCGAGCTCGGCAGGACGCCCGCACGCCTGACAAGATGAAGACGAACGAGTCGCTGGTCGCCAACGGCAACCTGAGtttggaggagaagaagaggaagatccTGAGATGTCTTCGTCGTCTGGAGGGACTCGGAGTCCTGAGAGCCCCCAACCCAGAGGACCAGATCCTGCAGACGATCGCCAagGACATCCGTCAGCAGCGTGTGCACCGCCAGCGGAGAGGGGTGGAGCTTCAGAAACTCCGTCAGACTCTCAGCAGCCTGCAGGACAAGAGCAGCTTCCACAGCCAGCAGGTGGACTACTACAGACATtacatcacttcctgtctggACCACTTGACTCACAGcagTAAATCGACCAATAAGAAGAAGCTTCCTGCTCTGAGCAACGCCGCCGCCAGGCTGCAGGAGAAAGGAGTTCTGGTGGAGATCCAGGACCTGCCAGCTacacaGTTTAAGAACGTGGTCTTTGACATCGTCCCTGGACCGGAGAAAGGAACATTCAACGTCAAAGCTCGATTCCTCGGCATCGAGATGGAAGAGTTCCCGCTCAAATACCAGGATCTATTGCAGCTGCAGTACGAAGGTGTGGCCGTGATGAAGATGTTCGACAAAGCCAAAATCAACGTCAACCTGCTCATCTTCCTCCTCAACAAGAAGTTCTTCAAGAAATGAAGTCCTGCTCTTCTTCTACTCTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTAATATCTACAACGGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACGGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCCTCCTCTCTACACTCCTATCTCTGGTTTTATATCTACAACAGAGTGACCCATCCTCTCTACGCTCCTATCTCTGGTTTAATATCTACAACAGAGTGACCCATCCTCTCTACGCTCCTATCTCTGGTTTTATATCTACAACGGAGTGACCCATCCTCTCTACTCTCCTATCTCTGGTTTAATATCTACAACAGAGTGACCCATCCTCTCTACTCTCCTATCTCTGGTTTTGTATGCTactacatcatgttttaatatatCTCATAACTAACTAACCAATCAGCTAAGCTTTATCAACATGTTATTGCTGCATTATTGCACATTTTAATAAGGGAACCAAATAGTTAAATAATCATGAGACAGGGTTAGTGTTGGGCATCTTCTCTACACTCCTATCTCTGCTGTTATGTCACTACGttatcttttatatatattatatatctatcTCTATATACGTCACTGtacttgtgtttgtctctcacTCTCAACGTGTAGTTCTGcttcctgtctgtgttttaATCTCACTAGAGTTTAAACAGAGTGAAGCATCTTCTCTACACTCCTATCTCTGTTTTTATACGTATATTCtatgtttcctgtttttatttcctgCTAATcagacagagtgagacatcccTCTGGCTCCTATCTCTGCTCaggtttattattaataaacagACACCAGCTGATAATTTAAGAGATATCATGTACCTTCAACACTAGTCTTATTTTGGAGGGTGTAGTTTCTTCGAGGCCATAAATCAGGAACCAGAATCTGAGTTATGATATGATCTTtgagtttaaatacattttagaaaagaagCTGCTCTGATCTATAACTGTACATATTTTCTGTcactttctgttttctctcttttacttttctttttgaagcatgttaataataataaattgaatttctGT

Function

NR:

description
PREDICTED: ras GTPase-activating-like protein IQGAP3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806075.1 True 2179 mRNA 0.44 7 40083030 40093260
XM_039806076.1 False 2129 mRNA 0.44 8 40083030 40093260

Neighbor

gene id symbol gene type direction distance location
LOC120562496 LOC103369586 coding upstream 103665 39924325 ~ 39979365 (+)
LOC120562359 NA coding upstream 254326 39811855 ~ 39828704 (+)
LOC120562494 LOC108250191,LOC103388058,LOC101480860,LOC107095276 coding upstream 279143 39781236 ~ 39803887 (+)
LOC120563008 NA coding upstream 655910 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 663357 39391948 ~ 39419673 (+)
si:dkey-15h8.17 NA coding downstream 18173 40111433 ~ 40113823 (+)
LOC120562363 NA coding downstream 46473 40139733 ~ 40152085 (+)
LOC120562376 LOC103369584 coding downstream 175688 40268948 ~ 40289601 (+)
LOC120562377 NA coding downstream 184936 40278196 ~ 40281752 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding downstream 358028 40451288 ~ 40477146 (+)
G79944 NA non-coding upstream 45869 40015559 ~ 40037161 (+)
G79922 NA non-coding upstream 140029 39791687 ~ 39943001 (+)
G79919 NA non-coding upstream 212234 39714107 ~ 39870796 (+)
LOC120562365 NA non-coding upstream 213069 39865777 ~ 39869961 (+)
G79921 NA non-coding upstream 299905 39717065 ~ 39783125 (+)
G79960 NA non-coding downstream 26910 40120170 ~ 40120511 (+)
G79982 NA non-coding downstream 129113 40222373 ~ 40255520 (+)
G79985 NA non-coding downstream 129322 40222582 ~ 40377864 (+)
G79998 NA non-coding downstream 186426 40279686 ~ 40280012 (+)
G80002 NA non-coding downstream 222172 40315432 ~ 40316591 (+)
LOC120562364 LOC108234077 other upstream 311610 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 619189 39460448 ~ 39463841 (+)
G79713 NA other upstream 628738 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 736598 39312639 ~ 39346432 (+)
LOC120562498 LOC103369894 other downstream 197722 40290982 ~ 40345060 (+)
G80003 NA other downstream 223479 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 285422 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 552399 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 914707 41007967 ~ 41012619 (+)

Expression


Co-expression Network