LOC120562372


Basic Information

Item Value
gene id LOC120562372
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40203039 ~ 40234663 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806081.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGACTTGTGGAGTTTCAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTATCACTGGGCTTGGCTACAAAGCTTCACCTCAGTCCCCAGACCAGCAGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGGTCTGCATTCTGCATTCTGTTATAAACTCAGTACTGCATTTA
>XR_005639762.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGACTTGTGGAGTTTCAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTATCACTGGGCTTGGCTACAAAGCTTCACCTCAGTCCCCAGACCAGCAGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGCTACAGCGGCGGGCGGCATGCTCGTGGTCACCCATGTCATCCCAGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCACACACAGATTCTCTGGGAATGTACTCTGGCGCTTTCGTCAGGGCCCCGCTGTTTGACATCTTGTCTGGATCTCTGATGGTGTCTGCTGGGACATCGATGAACAAATGTCGGAGTTTGTCGGAGAGTTGCCATGGAGCGAGTTTGCTAAAGAGCAGCCTTGTCCTCATCCCATAATGCACAGCAAGGTGAAGGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctacaccCATCTACTTTCTGGATGCTTTGGATGTAACTGGATACCTGTTCCCGATATATGAATCTAACGGCACGGCATACCACAACTATTACTATAGCTCCTATGTGGTTTAGACTGGTGGAGCTTTAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTGTCGCTGTGCTTGGCTGCAAAGCTTCACCTCGGTCTACAGAACAGGTGAGTCCAGTGTGATGTCACAGACCAG
>XR_005639763.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGACTTGTGGAGTTTCAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTATCACTGGGCTTGGCTACAAAGCTTCACCTCAGTCCCCAGACCAGCAGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGCTACAGCGGCGGGCGGCATGCTCGTGGTCACCCATGTCATCCCAGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCACACACAGATTCTCTGGGAATGTACTCTGGCGCTTTCGTCAGGGCCCCGCTGTTTGACATCTTGTCTGGATCTCTGATGGTGTCTGCTGGGACATCGATGAACAAATGTCGGAGTTTGTCGGAGAGTTGCCATGGAGCGAGTTTGCTAAAGAGCAGCCTTGTCCTCATCCCATAATGCACAGCAAGGTGAAGGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctacaccCATCTACTTTCTGGATGCTTTGGATGTAACTGGATACCTGTTCCCGATATATGAATCTAACGGCACGGCATACCACAACTATTACTATAGCTCCTATGTGTGGGAAGGTGTGAACCTGACCTGAAGAGTCCAGTTTGGGGTTCATCAGCTGTAAagtgtttgggtttttttccaGGTTTAGACTGGTGGAGCTTTAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTGTCGCTGTGCTTGGCTGCAAAGCTTCACCTCGGTCTACAGAACAGGTGAGTCCAGTGTGATGTCACAGACCAGGTGAGTCCAGTGTGGTGTCACAGACCAGGTGAGTCCAGTGTGGTGTCACAGACCAGGTGAGTCCATTGTGATGTCACAGACCAGGTGAGTCCATTGTGATGTCACAGACCAGGTGAGTCCATTGTGATGTCACAGACCTGGTATCTCATTTATAAACggggcgtacgcacaaaacggggctgaaaatgtgcgtacgccactttcCACGCAAagattgtgatttataaaaatctATTTTGAGGGGAGATTGTGCgatcctccacgcaaactctgacctatgcgtacgcacattttggagacaatgggaatGATTACTCGTATATATTTataagtattgatgcctcatgCATGTTTTCttactccatatcatccacattatcatgaagattaaatccagcagtgttatttg
>XR_005639764.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGACTTGTGGAGTTTCAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTATCACTGGGCTTGGCTACAAAGCTTCACCTCAGTCCCCAGACCAGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGCTACAGCGGCGGGCGGCATGCTCGTGGTCACCCATGTCATCCCAGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCACACACAGATTCTCTGGGAATGTACTCTGGCGCTTTCGTCAGGGCCCCGCTGTTTGACATCTTGTCTGGATCTCTGATGGTGTCTGCTGGGACATCGATGAACAAATGTCGGAGTTTGTCGGAGAGTTGCCATGGAGCGAGTTTGCTAAAGAGCAGCCTTGTCCTCATCCCATAATGCACAGCAAGGTGAAGGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctacaccCATCTACTTTCTGGATGCTTTGGATGTAACTGGATACCTGTTCCCGATATATGAATCTAACGGCACGGCATACCACAACTATTACTATAGCTCCTATGTGTGGGAAGGTGTGAACCTGACCTGAAGAGTCCAGTTTGGGGTTCATCAGCTGTAAagtgtttgggtttttttccaGGTTTAGACTGGTGGAGCTTTAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTGTCGCTGTGCTTGGCTGCAAAGCTTCACCTCGGTCTACAGAACAGGTGAGTCCAGTGTGATGTCACAGACCAGGTGAGTCCAGTGTGATGTCACAGACCAGGTGAGTCCTGTGTGATGTCACAGACCAGGTGAGTCCAGTGTGATGTCACAGACCAGGTGAGTCCTGTGTGATGTCACAGACCAGGTGAGTCCAGTTTGATGTCACAGACCAGGTGAGTCCTGTGTGATGTCACAGACTAGGTGAGTCCTGTGTGATGTCACAGACTAGGTGAGTCCAGTGTGATGTCACAGACCAGGTGAATCAACAGGAAACAGACTTTACCTTCTCGTGTTTCAGATTCAACCCTCAATCTGTTTCTTCTTCAGCAGCTGATCATCATGACCAACCAATCACATGAAGCGGCTTCACAGAAGCCAAAGACTACACCCACACAGGGGGCCCCGCCCAGATATGAGGCCCCGCCCATCCCAGAGACTCCACCCCCTTCAGAGAGAGATGACGAGACCGTGAAGCCTCAGGAATACAACACAAACATAGTCtgaccccccctcctccaccaaGCATGGTCCCGCCTCCTCCATCTGGCCACTGTTATAAACTCAGTACAGCCTGGTGATGTTCCTCAAGAAGACATCCGGCAGATTAACTGATGTTTTCGTTACATTTATATTGACCAAATCTTTGTTGTATTATTatgagacacagacatacagacagac
>XR_005639765.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGCAGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGCTACAGCGGCGGGCGGCATGCTCGTGGTCACCCATGTCATCCCAGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCACACACAGATTCTCTGGGAATGTACTCTGGCGCTTTCGTCAGGGCCCCGCTGTTTGACATCTTGTCTGGATCTCTGATGGTGTCTGCTGGGACATCGATGAACAAATGTCGGAGTTTGTCGGAGAGTTGCCATGGAGCGAGTTTGCTAAAGAGCAGCCTTGTCCTCATCCCATAATGCACAGCAAGGTGAAGGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctacaccCATCTACTTTCTGGATGCTTTGGATGTAACTGGATACCTGTTCCCGATATATGAATCTAACGGCACGGCATACCACAACTATTACTATAGCTCCTATGTGTGGGAAGGTGTGAACCTGACCTGAAGAGTCCAGTTTGGGGTTCATCAGCTGTAAagtgtttgggtttttttccaGGTTTAGACTGGTGGAGCTTTAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTGTCGCTGTGCTTGGCTGCAAAGCTTCACCTCGGTCTACAGAACAGGTGAGTCCAGTGTGATGTCACAGACCAG
>XR_005639766.1
CAGTTCCTCTCTGATATGTTGGCGTCTTCATATGATATTCagcattttgttataaaaagcAATGCTACAGCGGCGGGTGGTGTGCTCGTGGTCACCCATGTGATCCCGGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCAGATACATATACTCTGGGGATGTACTCTGGCGCTTTCGTCTGGGCACCGCTGTTTGACATCTTGTCTGGATCTCTGTTGGTGTCTGCTGGGACATCGATGAACAAATGTCGGGTGAACGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctgcctccaTCTACGTTCTGGATGCTTTGCATGTAACGGGATACCTGGACCTGGAATATAACAACACTTACTACTACCACCACGACTATTACTATAGCTCCTATGTGCTGTTCATCATGACCAACCAATCACATGAAGCAGCTTCACAGATGTCAGAGACTACGCCCACACAGGGGACCACGCCCACATATGAGGCCCCGCCCATCCCAGAGACTCCGCCCCCTTCAGAGAGCGACTACGAGACGTTGAAGCCTCAGGAATACAACACCGACATAGTCTGACCCCCCCTCCTCCATCTGACCCCCTCCTCCAACAAGCCCCGCCTCCTCCGCCTGGTCCCGCCTCCTCCATCTGGCTACAGCGGCGGGCGGCATGCTCGTGGTCACCCATGTCATCCCAGCACCTCAGGGTGCTGCGACACAAAACtctgcagagaagaagaagcaccGGGAACAACTGCTGGCCCTCGGGACGGTGCAGATCATGATCGGCCTGGCCGTCTTTCTCTTTGAGCTCGCCATGATTCCACACACAGATTCTCTGGGAATGTACTCTGGCGCTTTCGTCAGGGCCCCGCTGTTTGACATCTTGTCTGGATCTCTGATGGTGTCTGCTGGGACATCGATGAACAAATGTCGGAGTTTGTCGGAGAGTTGCCATGGAGCGAGTTTGCTAAAGAGCAGCCTTGTCCTCATCCCATAATGCACAGCAAGGTGAAGGGAGGTGTGGGACTCAgcgttgttgctgctgttgcttctgctgctgctacaccCATCTACTTTCTGGATGCTTTGGATGTAACTGGATACCTGTTCCCGATATATGAATCTAACGGCACGGCATACCACAACTATTACTATAGCTCCTATGTGTGGGAAGGTGTGAACCTGACCTGAAGAGTCCAGTTTGGGGTTCATCAGCTGTAAagtgtttgggtttttttccaGGTTTAGACTGGTGGAGCTTTAGGTGTTTTGGCTGTTTTCTCCTTCCTGGGCTTCATCGTCTCCATCTGTGTCGCTGTGCTTGGCTGCAAAGCTTCACCTCGGTCTACAGAACAGGTGAGTCCAGTGTGATGTCACAGACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806081.1 False 908 mRNA 0.53 8 40224168 40234663
XR_005639762.1 False 1525 transcript 0.53 14 40205513 40234663
XR_005639763.1 False 2009 transcript 0.51 14 40205104 40234663
XR_005639764.1 True 2245 transcript 0.52 16 40203039 40234663
XR_005639765.1 False 1492 transcript 0.53 13 40205513 40234663
XR_005639766.1 False 1489 transcript 0.53 13 40205513 40234663

Neighbor

gene id symbol gene type direction distance location
LOC120562374 NA coding downstream 1906 40180342 ~ 40201133 (-)
LOC120562362 NA coding downstream 27923 40125425 ~ 40175116 (-)
LOC120562356 ttc24 coding downstream 279890 39901765 ~ 39923149 (-)
LOC120562358 LOC101076950 coding downstream 359863 39833153 ~ 39843176 (-)
LOC120562487 NA coding downstream 1060334 39107304 ~ 39142705 (-)
LOC120562375 NA coding upstream 10722 40245385 ~ 40252154 (-)
tmem79b NA coding upstream 119971 40354634 ~ 40364184 (-)
pmvk pmvk coding upstream 245403 40480066 ~ 40487346 (-)
LOC120562399 NA coding upstream 576572 40811235 ~ 40816555 (-)
LOC120562403 NA coding upstream 649458 40884121 ~ 40888754 (-)
G80088 NA non-coding downstream 79707 40091864 ~ 40123332 (-)
G80099 NA non-coding downstream 103393 40057011 ~ 40099646 (-)
G80102 NA non-coding downstream 104048 40083369 ~ 40098991 (-)
G80087 NA non-coding downstream 109772 39977662 ~ 40093267 (-)
LOC120562371 NA non-coding downstream 134384 39999000 ~ 40068655 (-)
G80142 NA non-coding upstream 57847 40292510 ~ 40292941 (-)
G80146 NA non-coding upstream 61167 40295830 ~ 40344314 (-)
G80154 NA non-coding upstream 82082 40316745 ~ 40318274 (-)
G80158 NA non-coding upstream 87252 40321915 ~ 40322561 (-)
G80170 NA non-coding upstream 182415 40417078 ~ 40420432 (-)
G80046 NA other downstream 341491 39779384 ~ 39861548 (-)
G80027 NA other downstream 625100 39576663 ~ 39577939 (-)
G79872 NA other downstream 746400 39396261 ~ 39456639 (-)
G79820 NA other downstream 1064657 39097772 ~ 39138382 (-)
G79767 NA other downstream 1295018 38906780 ~ 38908021 (-)
G80186 NA other upstream 257660 40492323 ~ 40497596 (-)
LOC120562415 NA other upstream 443680 40678343 ~ 40765467 (-)
G80488 NA other upstream 781187 41015850 ~ 41017192 (-)
G80498 NA other upstream 868580 41103243 ~ 41104094 (-)
LOC120562506 NA other upstream 1178290 41412953 ~ 41421025 (-)

Expression


Co-expression Network