LOC120562377


Basic Information

Item Value
gene id LOC120562377
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40278196 ~ 40281752 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806087.1
cagacagggagacagagagggagacagtcagacagacaggcagacagacagggagacatcATGATCATCAAAGACCACATCAACCTGCCGGGCTTCGCTGGGCAGCACCCACTGTGTGGACCCAACGACGAGCGtttCGGGATCAGGTTCCCCTGTATGTCCGATGCCTACAGTAAGGACCTGAGGCGCCTGGCTGTGGAGGTGGGCTCTGAGCttagctgtctgtctgactacctgtctgcctgtctgactacctgtctgtctgtctgcctgtctgtctgtctgtagtttCGGGATCAGGTTCCCCTGTATGTCCGATGCCTACAGTAAGGACCTGAGGCGCCTGGCTGTGGAGGTGGGCTCTGAGCttagctgtctgtctgactacctgtctgcctgtctgactacctgtctgtctgtctgtctgtctgtagtttCGGGATCAGGTTCCCCT

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05133 Pertussis
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806087.1 True 454 mRNA 0.56 2 40278196 40281752

Neighbor

gene id symbol gene type direction distance location
LOC120562363 NA coding upstream 126111 40139733 ~ 40152085 (+)
si:dkey-15h8.17 NA coding upstream 164373 40111433 ~ 40113823 (+)
LOC120562361 LOC103369586 coding upstream 184936 40083030 ~ 40093260 (+)
LOC120562496 LOC103369586 coding upstream 298831 39924325 ~ 39979365 (+)
LOC120562359 NA coding upstream 449492 39811855 ~ 39828704 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding downstream 169536 40451288 ~ 40477146 (+)
decr1 decr1 coding downstream 205851 40487603 ~ 40507973 (+)
LOC120562386 NA coding downstream 228298 40510050 ~ 40549415 (+)
LOC120562500 NA coding downstream 373760 40655512 ~ 40660314 (+)
LOC120562405 NA coding downstream 548760 40830512 ~ 40837078 (+)
G79982 NA non-coding upstream 22676 40222373 ~ 40255520 (+)
G79960 NA non-coding upstream 157685 40120170 ~ 40120511 (+)
G79957 NA non-coding upstream 169715 40057013 ~ 40108481 (+)
G79953 NA non-coding upstream 179131 40030375 ~ 40099065 (+)
G79944 NA non-coding upstream 241035 40015559 ~ 40037161 (+)
G80002 NA non-coding downstream 33680 40315432 ~ 40316591 (+)
G80004 NA non-coding downstream 34286 40316038 ~ 40317625 (+)
G80005 NA non-coding downstream 47436 40329188 ~ 40331187 (+)
LOC120562379 NA non-coding downstream 64695 40346447 ~ 40347372 (+)
G80008 tmem79,LOC103369887,LOC102205740,LOC102794394,LOC101478387 non-coding downstream 74416 40356168 ~ 40399888 (+)
LOC120562364 LOC108234077 other upstream 506776 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 814355 39460448 ~ 39463841 (+)
G79713 NA other upstream 823904 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 931764 39312639 ~ 39346432 (+)
LOC120562498 LOC103369894 other downstream 9230 40290982 ~ 40345060 (+)
G80003 NA other downstream 34987 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 96930 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 363907 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 726215 41007967 ~ 41012619 (+)

Expression


Co-expression Network