LOC120562386


Basic Information

Item Value
gene id LOC120562386
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40510050 ~ 40549415 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806099.1
ATGGAGGATCTGTGCAGTGTGAGCGGTCTGGATCCTCTCTGGGACTGGAACCTGACCTGGTACTCGTCCCGGCCAGACCTGACCCAGTGTTTCCAGCACACGGTCCTGGTCTGGTTCCCCTGTGTCTACCTGTGGACCTGTTCTCCTCTTTACCTGCTGTACCTGCAGCTCCGCCCGCACAGAGGGGTCATCCCGCTGTCCAAACTCTGCTGCAGCAAGACGctGCTGTCTCTCAGTCTGGCTTCTTTCTGTCTGCTGGAGATGTTTTATTTCCTGGTGAAGAAGAACGAAGAGATCCAGAACCACCTGCTGATCCTGATTGGTCCGCTGATCAGAAGCCTCACTCTGGTTCTGTCTGTGGTTATAATCCAGATTGAGAGGATGAAGGGCAGTCGTTCCtccgtcctcctcttcctcttctggaCTCTTCTGGTTCTTTGCTCCGTCGTTCCTCTGAAGGTCAACATCCATCAGATTATTGATCAGGGTTTTTCATCAGATGCTGTTCGTTTTGTTGCTTTCTTCGTCTGTTTTTCCCTTCAACTCATCGAACTCATCCTCAGCTGCTTCTCCGATCGCCGACCGCTctctgagaaacacacacagAACCAATGTCCAGAAGAAGACGCCTCGTTTCTCTCcaactttttcttcttctggttCAGCAATTTGGTGGGCCGAGGTTACCGGCACCCCCTGCAGGCTGCAGACCTGTGGTCTCTGCGGGACCAGGACTCATCGATCCGGATCATGACGGATTTGGAGAAGTTCTGGAGTCAGAGCTGCAAACAGCTGCAGGAGAAACCTGCTGGTTTTGGACCCTcgtggtcctggtcctggtcctggtcccgGTCTGGTGGGGTTTCTGCTCCTACAGAAGAAACGCTGCTGCTGAGGAGGAACAGGAAGGGGCGGGGCTACGGCCTCTTCCTCCTGCAGGCTCTGGGGCGGAGCTTTGGGTTCTACTTCCTGTCTGGGACACTTTGTCTTCTCCTGCATGACGCCTTCATGTTCGCCATCCCGCAGGTGCTCAGTTTGCTGCTGTCCTTCATGAGGGACAAAGACGCTGCGATGTGGAAAGGGTTCCTGTTCGCCTCGCTGCTCTTCCTGCTGTCCTGTCTGCAGTCTCTGCTGCATCATCAGTACATGTTCCACTGCTTCACCGTCGGGATGAGAGTCAAGACGGCCGTCATGGGCCTCGTCTACAGGAAGTGTCTGCTGATCAGCAGTGCAGCTCGGCGGCAGTGTACTTTGGGAGAAATCATTAATCTGGTTTCAGCCGACACTCAGAAGCTGATGGACTTTATAGTTTATTTCAACAGTCTTTGGGTCGCTCCCATCGAGATTGCTCTCTGCTTCTACTTCCTGTGGCAGctcCTCGGTCCATCTGCCCTCGCTGGTCTCACTGCTGTCGTTCTGATCTTCCCTCTGAACGGATTCATCGCTAAACTGAGAAGCAAACTGCAGGAGGTTCAGATGAAGTTCATGGACGGTCGGATAAAACTGATGAACGAGATCTTGAGCGGTGTGAAGATCCTTAAGTTTTACGCCTGGGAGGAAGCTTTCCTGCGACGTGTTGGTGTCCTGAGAGATGGGGAACTGGGGGCGCTGAAGAAATCTCAGATCCTCTACTCCGTCTCTCTGGCTTCCTTcaactcctcctccttcctgATTGCCTTCTTAGTGTTTGCCGTCTACGTGCTGATTGATGAGCGAAATGTTCTGGATGCTCAGAAAATCTTTGTTTCTGTCGCTCTCATCAACATCCTAAAAACTCCTCTGAGTCAGCTTCCCTTCGCCATGAGCACCGCCATGCAGGCCGTTGTCTCTCTCAGACGTCTGGGAAACTTCCTGTGCTATGACGAGCTGAAGCCAGACAACGTGGAGAGACTTCCTCACAGCATGGATGCAGTCAGCGTGATGATTGAGGGCGGGACTTTCTCCTGGACAAATGAGGGCCCGCCATGTCTGCAGAGGATCAGCATGAAGGTGAAAACGGGTTCCCTGGTGGCCGTAGTCGGCCATGTTGGCTCCGGGAAGTCGTCTCTGCTGGCAGCCATGTTGggggagatggagaggaggagcGGCTCTGTCTCCATTAAGGGTTCGCTGGCCTACGTCCCCCAGCAGGCCTGGATCCAGAATGCGTCTTTGACGAACAACATTTTGTTTGGTGAAGAGAGGACGGAGAGCTGGTACCAGCGTGTTCTGGAGGCATGCGCTCTGCTGCCGGACCTGGACATCCTGCCGGCCGGAGATGCCACGGAGATCGGGGAGAAAGGTCTTAACCTTTCTGGCGGTCAGAGGCAGAGGGTGAGTCTGGCTCGGGCCGTCTACAGGAAGTCAGATGTTTACCTGCTGGACGACCCGCTATCCGCCGTTGATACTCACGTTGGACAACACATCTTTGATCGAGTCATCGGACCCCGAGGACTCCTCAAAGACAAGACGCGGGTGCTGGTGACTCACGGCCTCagcttcctgtcgaaagcagaCCTGGTTCTGGTGATGGATGGCGGACAGATCTCAGAGATCGGGTCCTACATGGAGCTGATGGACAGGAAGGGAGCCTTTGCCAAATTCATCCACACCTTCAGTGGAAACCGGCGCAGAGATGCGTTTGTAGGCAACAGGAAGTCAGTTTCTCGCCTCAGTATGACTGATTTCTCCATCGATCTTTCTCATGAGCAGCTGATCAGctGTGATTTGAGCAGTGCCAGTGTTCAGATGATGGAGGCTGTTGATCAGGACTTGGACACTGGGGATGCTGGGAAACTTACAGAGGTTGACAAGGCTCACACAGGGAGGGTGAAGCTGCAGATGTACCGAGAGTACTTCAGGACTGTCGGCCTGCTCTTCATCATGACCATCATCTTCCTCTATGCCTTCCAGCAGGCATCCTCGTTGGCCTACAGCTATTGGCTGAGCCTGTGGGCCGACGAGGCGCCTGTCAACGGTACGCAGAGCGACCACAACCTGAAGCTGAGCGTGTTCGCCGCTCTGGGCTTCACTCAGGGGATCGCCATGTTTGGGACGACACTCGCCATCGCTCTGGGCGGTATCGTAGCATCGCGTCAGCTTCACGCTGATCTTCTCCACAGTGTCCTGCACTCACCCGTGTCTTTCTTCGAGGTGACACCCAGCGGAAACCTCCTGAACCGCTTCTCCAGAGAGATGGACGCCATAGACTGCATGATTCCTGATGGGCTGAAGATGATGCTGGGATACCTGTTCAAGCTGCTGGAGGTCTGCATCATCCTGTTGTTGGCCACACCCTTCACAGGGCTGGTGCTCCTCCCCCTCACCGCCGTCTACATCTTCATACAGAGTTTCTACGTGGCGTCTTCATGTCAGCTGCGACGACTGGAGGCTGTGAGTCGCTCACCGATCTACAGCCATTTTAACGAGACGGTTCAGGGCGCCAGCGTCATCCGAGCCTTCGGCGAACAGCGACGCTTTGTCGTCCATGCCAACCGCTGCATCGACAACAACCAGGAAGCTTACTTCCCTCGCTTTGTTGCCACCAGATGGCTGGCGGTGAATCTGGAGTTTTTGGGGAATCTGTTGGTGTTGGCTGCAGCCATCCTGTCGGTGCAAAGTCGGGATGAACTCAGCCCAGGCATCGTGGGATTGGCTGTGTCCCACTCTCTCCAGGTGACAGGAATCTTGAGCTGGATCGTCCGATCCTGGACTGATGTGGAGAACAACATTGTGTCGGTGGAGAGAGTCAAAGAGTATGACAACACACCCAAAGAGGCAGCGTGGACCATCGAGGACAGTTTTCTACCAGCAGCCTGGCCGACCACGGGAAACATCCAGTTTGAAGACTACGGACTGCAGTACCGTAAAGGTTTGGACTGGGCTTTGAACGACATCAACATCGACATCCAGGACAGAGAAAAGgTGGGGATTGTTGGAAGGACGGGAGCCGGGAAGTCCTCGCTGGCTTTGGGAATCTTCCGGATTCTTGAAGCAGCAAAGGGACGAATCTTTATCGACGGGATCGACATTGCTCAGATCGGCCTTCATGATCTCCGCTCCAGAATCACCATCATTCCTCAGGACCCGGTGCTGTTTTCTGGGTCTCTGAGGATGAACCTGGACCCCTTTGATACCTGTTCAGAAGAGGATCTGTGGAAAGCTCTGGAACTGGCTCATCTGAGCAGCTTTGTTTCTGCTCTGCCACAGAAACTGGACCACGAGTGCTCTGAAGGAGGAGAGAACCTCAGCCTGGGTCAGCGACAGCTGCTGTGTTTGGCCCGAGCTCTGCTGAGGAAGACCCGGATCCTGGTTCTGGATGAAGCCACAGCAGCTGTGGACCTGAAGACAGATCAGCTGATCCAGTCCACTATTCGGTCTCAGTTTGGGGACTGTACGGTTCTGACCATCGCCCACCGCCTCAACACCATCATGGACTACACCAGggtGGTAGTTATGGACCGAGGCTGTATTTCAGAGATGGATTCTCCGTCTCAGCTCCTCCGTCAGCAGACTCACTTCTACCAGATGTGTGTCGAGGCCGGTTTGGTCTGACTGACTCTGTTGAAAACAAACGGatccttcatcctcctcttctgtTCTTTATATGCCTGaaagatgttaaaaacaaactctctcttctgttctttTATAGACGTCAGAACCAACACCTGCACTGTAAGACGTgtaatataatacataatacagAACTTTCTAACAGTCTGGCTCTTTGTGTAAaacatttagggccctatcttgcacccagcaaTTGACtatgtacaccgacgcatgtatcattcctattttgcacccgacgcacagcggacttttcttTTCACAGACGTAcgttggtaaattagggaatgaatttgcCCTCATGGGGGTTGTTTGGTTTTCAATACTCAtaggatttcatttttttcgataccataaaagtatcgacgttcagTACCCAGCCCTGTCAGGGGCACATTCAGTCTCAAAACGGTGTGCACCATTTTGCTACGGTTTCCTGGTTGAACGACATGTTTACTCAAAACAGTGTGCAACTGTTTTGAGTTGTGTTTACTCTGGTTTAGTGGCTGTGTCCCTCTTTAATTGGCTGCCTCCCAGGTGATAGCCAATCAGCAGAAACATGTATGTAAAAACTGATCACACATCAGGTAACATGTAAACATGTGATCATGTGAcatcagaggcctgtactacaaatCAAGATTTGTacgtaacttcaggttcaacccagggttttctatACCACGATGGTGAATCACTTGTTACCGGCTTAAATCACCATGGTAACTTacgctgaacacctaacctggtctgGAGCAGGTTAaattggagattagagatcaactggtgtaaaagcaccgccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806099.1 True 5358 mRNA 0.53 30 40510050 40549415

Neighbor

gene id symbol gene type direction distance location
decr1 decr1 coding upstream 2077 40487603 ~ 40507973 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding upstream 32904 40451288 ~ 40477146 (+)
LOC120562376 LOC103369584 coding upstream 220449 40268948 ~ 40289601 (+)
LOC120562377 NA coding upstream 228298 40278196 ~ 40281752 (+)
LOC120562363 NA coding upstream 357965 40139733 ~ 40152085 (+)
LOC120562500 NA coding downstream 106097 40655512 ~ 40660314 (+)
LOC120562405 NA coding downstream 281097 40830512 ~ 40837078 (+)
LOC120562402 NA coding downstream 357913 40907328 ~ 40907836 (+)
LOC120562401 NA coding downstream 552633 41102048 ~ 41103783 (+)
LOC120562397 NA coding downstream 598449 41147864 ~ 41150002 (+)
G80024 NA non-coding upstream 15863 40492974 ~ 40494187 (+)
G80021 NA non-coding upstream 24993 40481811 ~ 40485057 (+)
G80015 NA non-coding upstream 53948 40454447 ~ 40456102 (+)
G80019 NA non-coding upstream 65333 40444385 ~ 40444717 (+)
G80008 tmem79,LOC103369887,LOC102205740,LOC102794394,LOC101478387 non-coding upstream 110162 40356168 ~ 40399888 (+)
G80200 NA non-coding downstream 62751 40612166 ~ 40612567 (+)
G80222 NA non-coding downstream 207382 40756797 ~ 40758554 (+)
G80223 NA non-coding downstream 211996 40761411 ~ 40762310 (+)
LOC120562411 NA non-coding downstream 225386 40774801 ~ 40775942 (+)
G80230 NA non-coding downstream 225620 40775035 ~ 40782050 (+)
LOC120562499 LOC103374404 other upstream 68734 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 164990 40290982 ~ 40345060 (+)
G80003 NA other upstream 188983 40316739 ~ 40321067 (+)
LOC120562364 LOC108234077 other upstream 738630 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 1046209 39460448 ~ 39463841 (+)
LOC120562387 NA other downstream 96244 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 458552 41007967 ~ 41012619 (+)
polr3glb NA other downstream 607059 41156474 ~ 41186945 (+)
G80320 NA other downstream 807065 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 828032 41377447 ~ 41393226 (+)

Expression


Co-expression Network