LOC120562387


Basic Information

Item Value
gene id LOC120562387
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40645659 ~ 40656567 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806100.1
AGTCACGCTGCCTTGTGAATATGTGATCATTCAGGACAAATGTAGTAGCACTACTTGGCTTTGGAGTCATAAAGGGGAAGCAGCAGTAGAGCTGGTTGGTCATGGACAGATTAAAGATGGATTCCCAGAGCTAAATCAGACAGACTGAGTGTTACAGAGAAATGTTCTCTGGTTATGAAGAATGTCACAGAGGAGGATGTTGGTCGTTACACCTGCAGACAGTTCAACAAATCAGGAGGACCACAACAAGGTCCAGATGCTGTGGTTCATCTGTCTGTTGTCAACATGGAAGAACAGAAGAACACTGATGATACAGTCACCTTGATCTGCTCTGTGTTGACATATGCTGGGTGTGATCACACAGTGAAGTGGCTCTATGAGGGGAATGAGAATGTCGTGGAGATACCATCTCATACCTGTTCAGCCAGTGTGTCATTTCCTCCTCATCTTAATCAGAAGTTACTGAAGTGTAACGTGACAGATAAGAAGAATGGAAACACGCTGCTGTGTAATGTCGGCCCCCAGTCCTCTTGTAAGAAAACAGgaaaCACAACAGTGGGAACAGATAACACACCAACACCAGATCGGTTGGTGTACATGGGTGTTGCTGTGGGAGTAACAGCACTCTTAGCAGCAATCATCATTGTGGTAGTCATCAGACGGAAGAAAACTAAAAGTAACAAAACACAGACGAATGAAAATATTGGACTGAGTTTGAACCCTGCAGAGAATCAGTCTGCTCCAGAAACCAGTCAGGACATGGCTGATCCTGAAGGTGGTGTTTTCTACGCCTCTGTCAGCCACACCAAGAAGAGCAGCAGTAGAGCTCAGGCTCGGGgtaaagatgatgatgatgatgatgatgatgatgcagtgACCTACAGCACTGTGaaagctcctcctcctccttctgctgctgctgcatcctCTGCTGATGTCAGCGACCTCTACGCCACCATCAACAAACCAAACCAATAAGACAGCACGGTGTACTTACAGCTCATAGCATTACAGGTATTTACATTGATAGTTAATAAAAAGACCAAGTCTGTTTTTATTCCGCGAGTGCCTTTTTTACTAAAATTCACTCATACTGTGTTACTGTATGAAGCCATTAAGCAGCATTGTTTCTGCAGTAGAAATCCTTATGatcatttaatatttatttatatttttgtacaTAACCCTTTTACCAGATTAATAGCAGTGTTGTTGATGCATGACGGAAAAGTCAAAACCTTGTAGCTAAACCTCATCTGGTTGTTGACGAGTTTAACGTGATTTTATATGATGAAGGACTGGGTTAGGTGGTTTTACATgatgtttgaaaatgtattgGTATCAATATGAAAACAAACCCACTGGAATAATACAGTGGTAGTTTTACATTTCAGGTCTTACATGatcaagttttctttttgttacaaATATTTTTATGATCACTTCAATGTTTATTGCTGTAAAATGCCTTTCTGTCCAGAAGGGGGTGTAGTAGATTAACTAGTAGCACAATGTGAAACATAGATAGTcttgttatttgttttaaatgtttacttTGTTACTTGCATGTTTATAATTATGTCAATgtccagcactttggtcaacctggttgttttaaatgtgctttacaaataaagttggattggataGATGTAAGAACCTGACATTCACATGACTGGTTTCTTAAATGAATGACAACATGTgtataatactgtatataatatatttttctttgtaaactTTCTGTCAGGCACTTTATTAACTTTATTGATTGATGTATGTTTGCTTGTGTAACCAGGAAGCTCTCAGGGTTTCTGGCTCAG
>XR_005639770.1
AGTCACGCTGCCTTGTGAATATGTGATCATTCAGGACAAATGTAGTAGCACTACTTGGCTTTGGAGTCATAAAGGGGAAGCAGCAGTAGAGCTGGTTGGTCATGGACAGATTAAAGATGGATTCCCAGAGCTAAATCAGACAGACTGAGTGTTACAGAGAAATGTTCTCTGGTTATGAAGAATGTCACAGAGGAGGATGTTGGTCGTTACACCTGCAGACAGTTCAACAAATCAGGAGGACCACAACAAGGTCCAGATGCTGTGGTTCATCTGTCTGTTGTCAACATGGAAGAACAGAAGAACACTGATGATACAGTCACCTTGATCTGCTCTGTGTTGACATATGCTGGGTGTGATCACACAGTGAAGTGGCTCTATGAGGGGAATGAGAATGTCGTGGAGATACCATCTCATACCTGTTCAGCCAGTGTGTCATTTCCTCCTCATCTTAATCAGAAGTTACTGAAGTGTAACGTGACAGATAAGAAGAATGGAAACACGCTGCTGTGTAATGTCGGCCCCCAGTCCTCTTGTAAGAAAACAGgaaaCACAACAGTGGGAACAGATAACACACCAACACCAGATCGGTTGGTGTACATGGGTGTTGCTGTGGGAGTAACAGCACTCTTAGCAGCAATCATCATTGTGGTAGTCATCAGACGGAAGAAAACTAAAAGTAACAAAACACAGACGAATGAAAATATTGGACTGAGTTTGAACCCTGCAGAGAATCAGTCTGCTCCAGAAACCAGTCAGGACATGGCTGATCCTGAAGGTGGTGTTTTCTACGCCTCTGTCAGCCACACCAAGAAGAGCAGCAGTAGAGCTCAGGCTCGGGgtaaagatgatgatgatgatgatgatgatgatgcagtgACCTACAGCACTGTGaaagctcctcctcctccttctgctgctgctgcatcctCTGCTGATGTCAGCGACCTCTACGCCACCATCAACAAACCAAACCAATAAGACAGCACGGTGTACTTACAGCTCATAGCATTACAGaatgctgtgtggactagccagaccctcctctgctctgcagtgtgtggaggatggtctggtAAAGTGAGACTACTGGCTCAGTAACACTGAGTTACTGGGTGCCCTTTTCTAAATCATCCCGCGGAAAAGACTTTCTGTTCGAGGTTTAATTTATAGATCTCCTTACCCTCAGGACCTAAATGGATCATGACTGGGACAGTTATTTAAAGAGGGATCAGTCATGTCATGAAGGATCTTGTGCATATTATTGCGCTTTTATTGTGTCATCGTTTATTACTGTTTTCTGCTGCTGTATGAATTTGCTTATCAGGTTTTTTGAGagattacataaataaataaaaaaaatgtcagtattTTGAGTTTTTAATTCTTGATTAATCTGTTTTAGTCTCTTATTACCAATCCCCCTCTACTGTTTCTTCACCGTGATAACTTTCTCCTACAAGAACAAACACATCACAGACAACGTCTCCAAAATGATTGGCCTCCCCACCCCTAACCTCTCAGACCTCAACAGAATGTCATGATTGTGGGTTctgttatgttctgtttcctgttttattttgacatctgTCTTGtctcccttgtcttgtctagtttacTTCCTGTCCTTGGTTTTCCCTCCCGTGTgattgccctaatgtgtttcacctgtttgcccagccttgtgtcacctgtcccttatTGGTCCTCGTTACCTGgtttatttagtctctgtgttgtctttgtctggTGTCGGATCATTTCGTTCTGTTTGCCCTGTTTCCTGCTGGATGTTcttctctgttctgttgtggATTCTGTTTTGCATTGGTTCCTGCCTGGCTACCTTCCGGAGGACACTTTGTTCAGAAACGTTGACAGTCGTGAGCgagagaacaagagagagagacggagaggcaCGATGGCTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806100.1 False 1823 mRNA 0.40 8 40645659 40653781
XR_005639770.1 True 1928 transcript 0.44 10 40645659 40656567

Neighbor

gene id symbol gene type direction distance location
LOC120562386 NA coding upstream 96244 40510050 ~ 40549415 (+)
decr1 decr1 coding upstream 137686 40487603 ~ 40507973 (+)
LOC120562382 LOC104937304,LOC103131143,LOC103374405,LOC102237830,LOC100708478,LOC102793710,LOC102303267 coding upstream 168513 40451288 ~ 40477146 (+)
LOC120562376 LOC103369584 coding upstream 356058 40268948 ~ 40289601 (+)
LOC120562377 NA coding upstream 363907 40278196 ~ 40281752 (+)
LOC120562405 NA coding downstream 173945 40830512 ~ 40837078 (+)
LOC120562402 NA coding downstream 250761 40907328 ~ 40907836 (+)
LOC120562401 NA coding downstream 445481 41102048 ~ 41103783 (+)
LOC120562397 NA coding downstream 491297 41147864 ~ 41150002 (+)
LOC120562391 NA coding downstream 507176 41163743 ~ 41174846 (+)
G80200 NA non-coding upstream 33092 40612166 ~ 40612567 (+)
G80024 NA non-coding upstream 151472 40492974 ~ 40494187 (+)
G80021 NA non-coding upstream 160602 40481811 ~ 40485057 (+)
G80015 NA non-coding upstream 189557 40454447 ~ 40456102 (+)
G80019 NA non-coding upstream 200942 40444385 ~ 40444717 (+)
G80222 NA non-coding downstream 100230 40756797 ~ 40758554 (+)
G80223 NA non-coding downstream 104844 40761411 ~ 40762310 (+)
LOC120562411 NA non-coding downstream 118234 40774801 ~ 40775942 (+)
G80230 NA non-coding downstream 118468 40775035 ~ 40782050 (+)
LOC120562410 NA non-coding downstream 123177 40779744 ~ 40781918 (+)
LOC120562499 LOC103374404 other upstream 204343 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 300599 40290982 ~ 40345060 (+)
G80003 NA other upstream 324592 40316739 ~ 40321067 (+)
LOC120562364 LOC108234077 other upstream 874239 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 1181818 39460448 ~ 39463841 (+)
LOC120562400 NA other downstream 351400 41007967 ~ 41012619 (+)
polr3glb NA other downstream 499907 41156474 ~ 41186945 (+)
G80320 NA other downstream 699913 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 720880 41377447 ~ 41393226 (+)
G80337 NA other downstream 764789 41421356 ~ 41456358 (+)

Expression


Co-expression Network