LOC120562390


Basic Information

Item Value
gene id LOC120562390
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41239083 ~ 41319704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806106.1
TGCTGTTCGCACTTCacaaagagctgagaggtgtaGTGTGTTACAACACGCAGCACATGCACTCAACTGGGAACGAGATGATGACTCCATCTGTGGTCTTTGTCTTGCTGGCTGTTCTAGGACAGACCAGCGCCACATTTGATACTAATATTGCTAGAGGAGGAAAGGTGATTCAGTCCTCCCTGTATGGGAATGCCGTCCCTGAAAGGGCCATTGATGGAAATCGTGCTAGCAACCTGGGACAGGGATCCTGTAGCGTCACACGAACAGATTTCAAACCATGGTGGAGACTGGACCTCGTGAAGACATATCAGATCAACACCGTCACCATCACCAACAGAAGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatGTGCTGTTATCTCGTCTATCAAAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATCTCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATCCTAATATTGCTAGACGTGGAAACGCCATTCAGTCCTCCCTGTATGAGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCTAGCAACTTGAGAGAGGGATCCTGTACCCACACTAAGAAAGATTTAAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCGCTGCGAGAATCAATGGTGCTGAGATCCGCATTGGAGATTCCCTCAATGACAATGGCAATGATAACCCCAGatgtgCTGTTATCTCGTCTATGGCAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATGTCAACATTGTGATTCCTGGAAGACAAGAATTCCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATCCTAATATTGCTAGACGTGGAAACGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCTAGCAACCTGGGACAGAGATCCTGTAGCGTCACTATGAAAGACTTAAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATAGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatgTGCTGTAATCTCATCTATCAAAGGTGGGACCTCCCAAACCTTTGTGTGTAATGAAATGGAAGGTCGTTATATCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTACAGGAATCACTGCTCCAACTGATATTAATATTGCTAGAGGTGGAAAAGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCCAGCCACCTAGGACAGAAATCCTGTAGTGTCACTAAGACGGATTTCAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACTATCACCAACAGAGGAGATTGTTGCGCCGGCAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatGTGCTGTTATCTCGTCTATCAAAGCTGGGACCTCCCAAACCTTTGAGTGTAATGGAATGGAAGGTCGTTATATCAACATTGTGATTCCTGGAAGACATGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATACTAATATTGCTAGAGGTGGAAACGTGATTCAGTCCTCCCTGTACGAGAATGAGTTCCCTGAAAGGGCCATTGATGGAAATCGTGCTAGCAACCTGGGACAGAGATCCTGTAGCGTCACTAACAATGATTTTAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCCACGAGAGAATCAATGGTGCTGAGATCCGCATTGGAGATTCCCTCAACAACAATGGCAACAATAACCCCAGATGTGCTGTTATCTCGTCTATGGCAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGAAAGGTCGTTTTGTCAACATTGTGATTCCAGGAAGACGAGAATACCTGACACTGTGCGAAGTGGAAGTCACTGGGACAGCATCATAGGAAACTGATTCTAACCCTAAACTGATTCTAACCCTAATTTCTTAGTTTATGTTCACTTATTCTAACGCTAGTCTATGCAAGTTTGCGTATTTACTGTGCTTTTGCTTCGCACACAGAGCATATTTTAAGTAAAACACTTTATGTGGTATTACATATCATAAGGTCAGGACATCATACAATCGTATGCTGGAGCTTTATGTAAAACTGATTCAGATGGTTGTTTTATACATTAGCTAACATAAAATAAAGGCTATGGttcaaatttaaatagcgaacaAAAGAGATACAGCTCTAGTAACTGATTATACCTACTATTCTGTACCATGAAAGCAGCGAGAGATGCATTATTAAACAGAACTGTGGGAAAATGAAAGCAATGGGTGAGAAATGATATACAGTGCACTGGCTGCATTGTATTTGTTGTAATTTTTCTTGGGCTTGTTTCtatctactgtacttaaatgtaCTTGCAAAATAAACATTACTTTTAAAGCTAa
>XM_039806107.1
TGCTGTTCGCACTTCacaaagagctgagaggtgtaGTGTGTTACAACACGCAGCACATGCACTCAACTGGGAACGAGATGATGACTCCATCTGTGGTCTTTGTCTTGCTGGCTGTTCTAGGACAGACCAGCGCCACATTTGATACTAATATTGCTAGAGGAGGAAAGGTGATTCAGTCCTCCCTGTATGGGAATGCCGTCCCTGAAAGGGCCATTGATGGAAATCGTGCTAGCAACCTGGGACAGGGATCCTGTAGCGTCACACGAACAGATTTCAAACCATGGTGGAGACTGGACCTCGTGAAGACATATCAGATCAACACCGTCACCATCACCAACAGAAGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatGTGCTGTTATCTCGTCTATCAAAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATCTCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATCCTAATATTGCTAGACGTGGAAACGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCTAGCAACCTGGGACAGAGATCCTGTAGCGTCACTATGAAAGACTTAAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATAGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatgTGCTGTAATCTCATCTATCAAAGGTGGGACCTCCCAAACCTTTGTGTGTAATGAAATGGAAGGTCGTTATATCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTACAGGAATCACTGCTCCAACTGATATTAATATTGCTAGAGGTGGAAAAGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCCAGCCACCTAGGACAGAAATCCTGTAGTGTCACTAAGACGGATTTCAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACTATCACCAACAGAGGAGATTGTTGCGCCGGCAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatGTGCTGTTATCTCGTCTATCAAAGCTGGGACCTCCCAAACCTTTGAGTGTAATGGAATGGAAGGTCGTTATATCAACATTGTGATTCCTGGAAGACATGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATACTAATATTGCTAGAGGTGGAAACGTGATTCAGTCCTCCCTGTACGAGAATGAGTTCCCTGAAAGGGCCATTGATGGAAATCGTGCTAGCAACCTGGGACAGAGATCCTGTAGCGTCACTAACAATGATTTTAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCCACGAGAGAATCAATGGTGCTGAGATCCGCATTGGAGATTCCCTCAACAACAATGGCAACAATAACCCCAGATGTGCTGTTATCTCGTCTATGGCAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGAAAGGTCGTTTTGTCAACATTGTGATTCCAGGAAGACGAGAATACCTGACACTGTGCGAAGTGGAAGTCACTGGGACAGCATCATAGGAAACTGATTCTAACCCTAAACTGATTCTAACCCTAATTTCTTAGTTTATGTTCACTTATTCTAACGCTAGTCTATGCAAGTTTGCGTATTTACTGTGCTTTTGCTTCGCACACAGAGCATATTTTAAGTAAAACACTTTATGTGGTATTACATATCATAAGGTCAGGACATCATACAATCGTATGCTGGAGCTTTATGTAAAACTGATTCAGATGGTTGTTTTATACATTAGCTAACATAAAATAAAGGCTATGGttcaaatttaaatagcgaacaAAAGAGATACAGCTCTAGTAACTGATTATACCTACTATTCTGTACCATGAAAGCAGCGAGAGATGCATTATTAAACAGAACTGTGGGAAAATGAAAGCAATGGGTGAGAAATGATATACAGTGCACTGGCTGCATTGTATTTGTTGTAATTTTTCTTGGGCTTGTTTCtatctactgtacttaaatgtaCTTGCAAAATAAACATTACTTTTAAAGCTAa
>XM_039806108.1
TGCTGTTCGCACTTCacaaagagctgagaggtgtaGTGTGTTACAACACGCAGCACATGCACTCAACTGGGAACGAGATGATGACTCCATCTGTGGTCTTTGTCTTGCTGGCTGTTCTAGGACAGACCAGCGCCACATTTGATACTAATATTGCTAGAGGAGGAAAGGTGATTCAGTCCTCCCTGTATGGGAATGCCGTCCCTGAAAGGGCCATTGATGGAAATCGTGCTAGCAACCTGGGACAGGGATCCTGTAGCGTCACACGAACAGATTTCAAACCATGGTGGAGACTGGACCTCGTGAAGACATATCAGATCAACACCGTCACCATCACCAACAGAAGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatGTGCTGTTATCTCGTCTATCAAAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATCTCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATCCTAATATTGCTAGACGTGGAAACGCCATTCAGTCCTCCCTGTATGAGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCTAGCAACTTGAGAGAGGGATCCTGTACCCACACTAAGAAAGATTTAAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCGCTGCGAGAATCAATGGTGCTGAGATCCGCATTGGAGATTCCCTCAATGACAATGGCAATGATAACCCCAGatgtgCTGTTATCTCGTCTATGGCAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATGTCAACATTGTGATTCCTGGAAGACAAGAATTCCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTTTAGATCCTAATATTGCTAGACGTGGAAACGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCTAGCAACCTGGGACAGAGATCCTGTAGCGTCACTATGAAAGACTTAAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACCATCACCAACAGAGGAGATTGTTGCGCCGGGAGAATCAATGGTGCTGAGATCCGCATAGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatgTGCTGTAATCTCATCTATCAAAGGTGGGACCTCCCAAACCTTTGTGTGTAATGAAATGGAAGGTCGTTATATCAACATTGTGATTCCTGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTGGTCAGGCTACAGGAATCACTGCTCCAACTGATATTAATATTGCTAGAGGTGGAAAAGTGATTCAGTCCTCCCTGTATGGGAATGAAGTCCCTGAAAGGGCCATTGATGGGAATCGTGCCAGCCACCTAGGACAGAAATCCTGTAGTGTCACTAAGACGGATTTCAAACCATGGTGGAGACTGGACCTCCTGAAGACATATCAGATCAACACTGTCACTATCACCAACAGAGGAGATTGTTGCGCCGGCAGAATCAATGGTGCTGAGATCCGCATTGGAAATTCCCTCAATGACAATGGCAACGGTAACCCCAGatgTGCTGTTATCTCGTCTATGGCAGCTGGGACCTCCCAAACCTTTGTGTGTAATGGAATGGAAGGTCGTTATGTCAACATTGTGATTCCAGGAAGACGAGAATACCTGACACTGTGTGAGGTGGAAGTCACTACCACAGTATAAATAGGAAACTGattctaaaataattttttcatGTTCACTTAATTTTAACACTAGCGTATTTGGTGTGTTTTTGATTCGCACACAGAGCATATTTTAAGGAAAACATTTGGTATTACATATCATAAGGTCAGGGCAATCGTATGCTGAAGCTTTATGTAAAATTGATGCAAATGGTTGTTTTATACATTAGCTAACATAAAACAAaggtttaaataaataaataacaaatttaaataacaaagaaaagagatatTGCTCTAGTAACTGATTATACCTTATATTCTGTACCATGAAAGCAGCAAGAGATGCATTattaaactgaactgttggaAATTGAAAGCAACGGGTGAGAAATGATATACAGTGCACTGGCTGTATTGTATTTGTTGTAATTTTTCTAAGGGCTTGTTTCtatctactgtacttaaatataCTTGCAAAATAAACATTACTTTTAAAGCtaa

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806106.1 True 2803 mRNA 0.45 12 41239083 41319704
XM_039806107.1 False 2374 mRNA 0.44 10 41239083 41319704
XM_039806108.1 False 2338 mRNA 0.44 10 41239083 41245052

Neighbor

gene id symbol gene type direction distance location
LOC120562391 NA coding upstream 64237 41163743 ~ 41174846 (+)
LOC120562397 NA coding upstream 89081 41147864 ~ 41150002 (+)
LOC120562401 NA coding upstream 135300 41102048 ~ 41103783 (+)
LOC120562402 NA coding upstream 331247 40907328 ~ 40907836 (+)
LOC120562405 NA coding upstream 402005 40830512 ~ 40837078 (+)
LOC120562404 NA coding downstream 180481 41500185 ~ 41501659 (+)
LOC120562396 NA coding downstream 221386 41541090 ~ 41545594 (+)
LOC120562406 NA coding downstream 231387 41551091 ~ 41576503 (+)
LOC120561585 NA coding downstream 407862 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 1207792 42527496 ~ 42529482 (+)
LOC120562412 NA non-coding upstream 102909 41135950 ~ 41136174 (+)
G80265 NA non-coding upstream 131357 41068184 ~ 41107726 (+)
LOC120562408 NA non-coding upstream 147169 41091477 ~ 41091914 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding upstream 193691 41044777 ~ 41045392 (+)
LOC120562417 NA non-coding upstream 257456 40979110 ~ 40981627 (+)
G80318 NA non-coding downstream 28878 41348582 ~ 41402166 (+)
G80321 txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340 non-coding downstream 40755 41360459 ~ 41362553 (+)
G80322 NA non-coding downstream 42975 41362679 ~ 41363468 (+)
G80323 NA non-coding downstream 43834 41363538 ~ 41364714 (+)
G80339 NA non-coding downstream 113342 41433046 ~ 41433547 (+)
polr3glb NA other upstream 52138 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 226464 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 582516 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 797767 40378682 ~ 40441316 (+)
G80003 NA other upstream 918016 40316739 ~ 40321067 (+)
G80320 NA other downstream 36776 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 57743 41377447 ~ 41393226 (+)
G80337 NA other downstream 101652 41421356 ~ 41456358 (+)
LOC120561589 NA other downstream 362709 41682413 ~ 41693005 (+)
G80410 NA other downstream 619794 41939498 ~ 42006594 (+)

Expression


Co-expression Network