LOC120562399


Basic Information

Item Value
gene id LOC120562399
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40811235 ~ 40816555 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806124.1
ctgtcattcagCTTTTTCTGAGCTTTTTGAAGAGCCTTGAGGTATCCCTCCTGCTGCTGACTCTAGAActcatctctctcctgtcattcagTGACAGTCATTAGCTTGTTCTTCTCCTCATTGTCAGCCAATCACCACCTCAGCAAAGATGGCATCAGTCGTTCCGTTTGCTTTGTTGCTCTGTTTGTCCAGCAGTCTGTTGACTGCATATGGTGCACCTTGCTGTCCTCCTGACTGGACACAGTTTGGCTCTCGCTGTTTTGCTTTCTACAGCGAGCCAAAGACCTGGATCGATGGAGAGaacttcTGCATCTCCGCTGGTGGGAATCTGGCTTCCCTCCACTCAGATGCGGAACATAAATTTGTCAAAGACATCATTTTCAAAGTGACTAATACACAAAAAACTTGCTGGATCGGAGGCTTTGACGCAGTGAAGGAGGGTACGTGGATGTGGACTGATGGATCCAAATTCGACTACAAAATCTGGAATGCGGGGGAGCCTAACAACTACGGGGGAGCAGAGAACTGTCTTACGATGAACTGGGATGGAgCAAACTGGAACGACTTGGCTTGTACCAACCAGAATTCTTTTGTGTGCTCCAagaacctgtgtgtgtaactctaCCACACCATCATGATGCCAATCCAGCTCATCTATAATCTCTATCATTGATTGCCTTTCAGATTGttcagcagacagaaacagctcTCTGCTGACAGATGACTCCCTTTCACGTTTATTATCTGAAGAGTTAGGGAACAGTTCACATTTGGGTTTAAAATTAGACAGAAACTGGCTCACTGAGCTGGACAaaactttacttttatttagtttactCAATATTGTCTGTTATAAACGGCACCCActcatctgataaaatattaaCACACTAATTAGATTTCTCTCTGATAATTATTGTTCAGCTCAATACAACTCTCATGTGTGTACGCAAAATAATTATatgatagaaaataaaaataaacattttgttgGACCTTTCTGTGATACAAGAGGAGAATGCAACTGTAATAACACTTCATAATAACCATTAATAATTCATATAGTCCACTGGTTTAATGAACTGGTTACTTTTTATTCTTAAAACTGATCTGTTgtgttcttttattcatctgATTTCCTTTACTATATAATC
>XM_039806125.1
gctgctgactctagaactcctctctctcctctcatccagTGACAGTCATTAGCTTGTTCTTCTCCTCATTGTCAGCCAATCACCACCTCAGCAAAGATGGCATCAGTCGTTCCGTTTGCTTTGTTGCTCTGTTTGTCCAGCAGTCTGTTGACTGCATATGGTGCACCTTGCTGTCCTCCTGACTGGACACAGTTTGGCTCTCGCTGTTTTGCTTTCTACAGCGAGCCAAAGACCTGGATCGATGGAGAGaacttcTGCATCTCCGCTGGTGGGAATCTGGCTTCCCTCCACTCAGATGCGGAACATAAATTTGTCAAAGACATCATTTTCAAAGTGACTAATACACAAAAAACTTGCTGGATCGGAGGCTTTGACGCAGTGAAGGAGGGTACGTGGATGTGGACTGATGGATCCAAATTCGACTACAAAATCTGGAATGCGGGGGAGCCTAACAACTACGGGGGAGCAGAGAACTGTCTTACGATGAACTGGGATGGAgCAAACTGGAACGACTTGGCTTGTACCAACCAGAATTCTTTTGTGTGCTCCAagaacctgtgtgtgtaactctaCCACACCATCATGATGCCAATCCAGCTCATCTATAATCTCTATCATTGATTGCCTTTCAGATTGttcagcagacagaaacagctcTCTGCTGACAGATGACTCCCTTTCACGTTTATTATCTGAAGAGTTAGGGAACAGTTCACATTTGGGTTTAAAATTAGACAGAAACTGGCTCACTGAGCTGGACAaaactttacttttatttagtttactCAATATTGTCTGTTATAAACGGCACCCActcatctgataaaatattaaCACACTAATTAGATTTCTCTCTGATAATTATTGTTCAGCTCAATACAACTCTCATGTGTGTACGCAAAATAATTATatgatagaaaataaaaataaacattttgttgGACCTTTCTGTGATACAAGAGGAGAATGCAACTGTAATAACACTTCATAATAACCATTAATAATTCATATAGTCCACTGGTTTAATGAACTGGTTACTTTTTATTCTTAAAACTGATCTGTTgtgttcttttattcatctgATTTCCTTTACTATATAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806124.1 True 1154 mRNA 0.41 9 40811235 40816555
XM_039806125.1 False 1102 mRNA 0.41 7 40811235 40815578

Neighbor

gene id symbol gene type direction distance location
pmvk pmvk coding downstream 323889 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 447051 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 559081 40245385 ~ 40252154 (-)
LOC120562374 NA coding downstream 610102 40180342 ~ 40201133 (-)
LOC120562362 NA coding downstream 636119 40125425 ~ 40175116 (-)
LOC120562403 NA coding upstream 67566 40884121 ~ 40888754 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding upstream 583255 41399810 ~ 41409787 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 798354 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 1187297 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 1235420 42051975 ~ 42057548 (-)
G80246 NA non-coding downstream 454 40809822 ~ 40810781 (-)
G80229 NA non-coding downstream 52718 40756840 ~ 40758517 (-)
LOC120562416 NA non-coding downstream 87337 40721812 ~ 40723898 (-)
G80218 NA non-coding downstream 136333 40673468 ~ 40674902 (-)
G80185 NA non-coding downstream 319042 40490457 ~ 40492193 (-)
LOC120562421 NA non-coding upstream 35743 40852298 ~ 40852870 (-)
G80252 NA non-coding upstream 43831 40860386 ~ 40868841 (-)
G80253 NA non-coding upstream 45100 40861655 ~ 40875360 (-)
G80256 NA non-coding upstream 54775 40871330 ~ 40874725 (-)
LOC120562414 NA non-coding upstream 93822 40910377 ~ 40911188 (-)
LOC120562415 NA other downstream 45768 40678343 ~ 40765467 (-)
G80186 NA other downstream 313639 40492323 ~ 40497596 (-)
G80129 NA other downstream 503712 40222367 ~ 40307523 (-)
LOC120562372 NA other downstream 576572 40203039 ~ 40234663 (-)
G80046 NA other downstream 949687 39779384 ~ 39861548 (-)
G80488 NA other upstream 199295 41015850 ~ 41017192 (-)
G80498 NA other upstream 286688 41103243 ~ 41104094 (-)
LOC120562506 NA other upstream 596398 41412953 ~ 41421025 (-)
LOC120562392 LOC103132156,LOC108243373 other upstream 616486 41433041 ~ 41605388 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 821582 41638137 ~ 41998854 (-)

Expression


Co-expression Network