LOC120562400


Basic Information

Item Value
gene id LOC120562400
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41007967 ~ 41012619 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806126.1
AGAAAGGGGGGAGATCTTGATAAGATCGTTGACATGTATCCATGGCTTCTGCAGCCAAAGCAAACAgtataatgtgtgtttttgccgACGTAGGCAGGGAAAAGGTACAGGTGGCTTGTTGGTGACCTAGTTTCCCTCCCTGTCTGCTGGGGAACCTGCAGAAAAGTCTGATATAAAGAGGAGCTCACAAACAAGTGGAGACACTGGATGGTCAAACACAAAGGGATCAACATGAAGATCTCTATCTTTGCTGGTGTTCTGCTGATCTCTGCTGCCGTGCTCTCTGTGGACGGACAAAGTTGGACTAAGTTTGAGCATAAGCATATCAATGCTGGGATGACTGTTGTCCAATGTACCCAGGTTATAAAAGATAGAAAAATCGTGACCCCACCCACCCAAGTGAACCCAAGCAACAGCTGCAAGAGTCTCAATACCTTCATCATCAAAGGAGATGTGAAAGCCATCTGTGCTGTAGGAGGAGGAGACCCATATGGCAACAACGGTATGACAATCAGCAAAGCTACTTTCCCAATTGTTGACTGTAACCTGGTGAAGCAGAATCCACCTGCTGTTCCCTACAACTGTCGGTACAAAGGAGTAGCTCGTAACAACAGAAGAATTATAGTCAGATGTGAACATGGTCTTCCTGTTCACTTACATGGAAGTCAGTAAtatgttactacctgatgaaccagagtaatctgttactacctgatgaatcagagtaatctgttactacctgatgaatcagagtaatctattactacctgatgtatCAGTATAACTTGTGTCTCC
>XR_005639771.1
TAGAActcatctctctcctgtcattcagATCAACATGAAGATCTCTATCTTTGCTGGTgttctgctgctctctgctgctctcatgTTCCTGGGACCAGAAACTGCAGATGCTCTGTCCTTTGATACTAGGCACGTCAACATGAGGGATGACTGCTGCCCAATGTACCAATGTGATGAATGAGGAAAGGAGAAAAATTCAATCAGGGAAAACAAACCCTGCAAGGATACCAATACCTTCTTGAATGGCAGGGAAAAGGTACAGGTGGCTTGTTGGTGACCTAGTTTCCCTCCCTGTCTGCTGGGGAACCTGCAGAAAAGTCTGATATAAAGAGGAGCTCACAAACAAGTGGAGACACTGGATGGTCAAACACAAAGGGATCAACATGAAGATCTCTATCTTTGCTGGTGTTCTGCTGATCTCTGCTGCCGTGCTCTCTGTGGACGGACAAAGTTGGACTAAGTTTGAGCATAAGCATATCAATGCTGGGATGACTGTTGTCCAATGTACCCAGGTTATAAAAGATAGAAAAATCGTGACCCCACCCACCCAAGTGAACCCAAGCAACAGCTGCAAGAGTCTCAATACCTTCATCATCAAAGGAGATGTGAAAGCCATCTGTGCTGTAGGAGGAGGAGACCCATATGGCAACAACGGTATGACAATCAGCAAAGCTACTTTCCCAATTGTTGACTGTAACCTGGTGAAGCAGAATCCACCTGCTGTTCCCTACAACTGTCGGTACAAAGGAGTAGCTCGTAACAACAGAAGAATTATAGTCAGATGTGAACATGGTCTTCCTGTTCACTTACATGGAAGTCAGTAAtatgttactacctgatgaaccagagtaatctgttactacctgatgaatcagagtaatctgttactacctgatgaatcagagtaatctattactacctgatgtatCAGTATAACTTGTGTCTCC

Function

GO: NA

KEGG:

id description
K16631 ANG, RNASE5; angiogenin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806126.1 False 795 mRNA 0.44 2 41010354 41012619
XR_005639771.1 True 947 transcript 0.44 4 41007967 41012619

Neighbor

gene id symbol gene type direction distance location
LOC120562402 NA coding upstream 100131 40907328 ~ 40907836 (+)
LOC120562405 NA coding upstream 170889 40830512 ~ 40837078 (+)
LOC120562500 NA coding upstream 347653 40655512 ~ 40660314 (+)
LOC120562386 NA coding upstream 458552 40510050 ~ 40549415 (+)
decr1 decr1 coding upstream 499994 40487603 ~ 40507973 (+)
LOC120562401 NA coding downstream 89429 41102048 ~ 41103783 (+)
LOC120562397 NA coding downstream 135245 41147864 ~ 41150002 (+)
LOC120562391 NA coding downstream 151124 41163743 ~ 41174846 (+)
LOC120562388 NA coding downstream 207465 41220084 ~ 41294381 (+)
LOC120562390 NA coding downstream 226464 41239083 ~ 41319704 (+)
LOC120562417 NA non-coding upstream 26340 40979110 ~ 40981627 (+)
G80271 NA non-coding upstream 40151 40967350 ~ 40967816 (+)
LOC120562409 NA non-coding upstream 48262 40958368 ~ 40959705 (+)
LOC120562418 NA non-coding upstream 103006 40904261 ~ 40904961 (+)
G80237 NA non-coding upstream 132591 40861652 ~ 40875376 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding downstream 32158 41044777 ~ 41045392 (+)
G80265 NA non-coding downstream 55565 41068184 ~ 41107726 (+)
LOC120562408 NA non-coding downstream 78858 41091477 ~ 41091914 (+)
LOC120562412 NA non-coding downstream 123331 41135950 ~ 41136174 (+)
G80299 NA non-coding downstream 202902 41215521 ~ 41598153 (+)
LOC120562387 NA other upstream 351400 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 566651 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 662907 40290982 ~ 40345060 (+)
G80003 NA other upstream 686900 40316739 ~ 40321067 (+)
LOC120562364 LOC108234077 other upstream 1236547 39765173 ~ 39771420 (+)
polr3glb NA other downstream 143855 41156474 ~ 41186945 (+)
G80320 NA other downstream 343861 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 364828 41377447 ~ 41393226 (+)
G80337 NA other downstream 408737 41421356 ~ 41456358 (+)
LOC120561589 NA other downstream 669794 41682413 ~ 41693005 (+)

Expression


Co-expression Network