LOC120562401


Basic Information

Item Value
gene id LOC120562401
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41102048 ~ 41103783 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806128.1
CTCTTCCTACCTGCTTCCTCAAGGTGTAGCTGTCATTCTTACCAGGAAACCAGTTACCTTTCCCTCCAGGCATCGAGTCAACTCTATGGACCGTCTGAAGAAACTTTGCAGCCCATCCTTCCTGCTTCCTCAAGGTGTGTCTGTCATTCATACCAGGAAACCAGTTACCTTTCCCTCCAGATCAACATGAAGATCTCTATCTTTGCTGGTGTTCTGCTGATCTCTGCTGCCGTGCTCTCTGTGGACGGACAAAGTTGGGCTCAGTTTCAAAATAAGCATATCAACCCTGGGATGACTGCTGGCCAATGTACCCAGGTGATAGCAGCCAGAAAAATCGTGAACCCACCCACACTCAATAACCCAAAAATCAGCTGTAAGGGTATCAATACCTTCATCAGCACACAGGATGTGAATGCGGTCCCAGACATCTGTGCTAAGGGAGGAGGAGACCCATATGGCACCAAGGGTATGACAATCAGCAAAGCTAGTTTCCCAATTGTTGACTGTAACCTGGTGAAGCAGAATCCACCTGCTGTTCCCTACAACTGTCGGTATGGTAACGGTGTTCCTTCTACCAAGAAAATTATAGTCAGATGTGAAAACGGTAAACCTGTTCATTTTCATGGAAGtaagtaatctgttactacctgatgaatcagagtaatctgttactacctgatgaatcagagtaatctgttactacctgatgaaccagag

Function

GO:

id name namespace
GO:0042742 defense response to bacterium biological_process
GO:0004518 nuclease activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806128.1 True 717 mRNA 0.46 3 41102048 41103783

Neighbor

gene id symbol gene type direction distance location
LOC120562402 NA coding upstream 194212 40907328 ~ 40907836 (+)
LOC120562405 NA coding upstream 264970 40830512 ~ 40837078 (+)
LOC120562500 NA coding upstream 441734 40655512 ~ 40660314 (+)
LOC120562386 NA coding upstream 552633 40510050 ~ 40549415 (+)
decr1 decr1 coding upstream 594075 40487603 ~ 40507973 (+)
LOC120562397 NA coding downstream 44081 41147864 ~ 41150002 (+)
LOC120562391 NA coding downstream 59960 41163743 ~ 41174846 (+)
LOC120562388 NA coding downstream 116301 41220084 ~ 41294381 (+)
LOC120562390 NA coding downstream 135300 41239083 ~ 41319704 (+)
LOC120562404 NA coding downstream 396402 41500185 ~ 41501659 (+)
LOC120562408 NA non-coding upstream 10134 41091477 ~ 41091914 (+)
G80280 LOC100709493,LOC102203400,LOC102799186,LOC102289534,LOC101466554,LOC103358480 non-coding upstream 56656 41044777 ~ 41045392 (+)
LOC120562417 NA non-coding upstream 120421 40979110 ~ 40981627 (+)
G80271 NA non-coding upstream 134232 40967350 ~ 40967816 (+)
LOC120562409 NA non-coding upstream 142343 40958368 ~ 40959705 (+)
LOC120562412 NA non-coding downstream 32167 41135950 ~ 41136174 (+)
G80299 NA non-coding downstream 111738 41215521 ~ 41598153 (+)
G80306 NA non-coding downstream 209928 41313711 ~ 41347897 (+)
G80318 NA non-coding downstream 244799 41348582 ~ 41402166 (+)
G80321 txnip,LOC102791564,LOC102307684,LOC101475238,LOC102207340 non-coding downstream 256676 41360459 ~ 41362553 (+)
LOC120562400 NA other upstream 89429 41007967 ~ 41012619 (+)
LOC120562387 NA other upstream 445481 40645659 ~ 40656567 (+)
LOC120562499 LOC103374404 other upstream 660732 40378682 ~ 40441316 (+)
LOC120562498 LOC103369894 other upstream 756988 40290982 ~ 40345060 (+)
G80003 NA other upstream 780981 40316739 ~ 40321067 (+)
polr3glb NA other downstream 52691 41156474 ~ 41186945 (+)
G80320 NA other downstream 252697 41356480 ~ 41360206 (+)
LOC120562389 NA other downstream 273664 41377447 ~ 41393226 (+)
G80337 NA other downstream 317573 41421356 ~ 41456358 (+)
LOC120561589 NA other downstream 578630 41682413 ~ 41693005 (+)

Expression


Co-expression Network