LOC120562406


Basic Information

Item Value
gene id LOC120562406
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41551091 ~ 41576503 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806133.1
cccccccggacgccccggacagtacgtaaaaagtggacatgtccgggcaaaagaggacgtttggtcaccctagaTAAAGTGATGAGAAAAGGCCCTCAGTAGTTCAGTCATGTTTTCTAACTACCCATTTAGTCTGAGCAAAAGTCCAACAAGCCAAAAGGATTCAACTGACACTGATATGACACAGAGAGAAGCAGCCAATCCGAGGACGAGCTGCTGatatttggctttttttccGGGAGAAATGATGTGAGGGATGAATGAGTGATGATGTGCTAATGAATGATTGGACTACTGctctcagtgtttcctctccaGATGAAGGTGTGGACTCTGCTATGAGTCAgtgtgaggacagagaggagggagccCCTCCCTCTAAAACCACTCTGTGTGGGGAACATGACAGCCAGACCAAAGCTCAAAGCCCAGAGAAGCAGCACAGACCTgcacctggacctggacctaCACCTGAACATGgacctggtcctggtcctggtcctggtcctggtcctggacTTGGACCTGGAACTggacccagctgtgtgtcctttaaGAGTGACCGATTTATGGGTCATATTATAGACTTCAAAGATGGACGCCACTCTGTAGATCAAAGcACAGAGAAGCAGCATAGACCTGGACCTCGACCTTCACCTGGACCTGGACCCGGACCCAGATCCGGACCCAGATCCGGACCCGGACCAGGACCTGGACTTGGACCTggacccagctgtgtgtccttcaagAGTGACCGGTCGAAGGATGATTTTTTGATTAATTTTAAACAACAACATGACCAAAAagtggaccaggagagctcagaggttcccagtggtcagtcggcccagcagcatcaaacacacctggactccatatttatgctgctaGAGGAGGACATTGTCACTTTTGTGAAGAAAgagctgaagaagatccagaaggttctaagtccagattacccagaatgcttCGAGAGTCAGATGGAGGATGTGGAGATGTTGGATGGTAAGGATGAAGAGCAGAGgtggagcagcagagaggcatttcggaagatcacactgcacttcctgaggagaatgaagcaggagGAGCTGGCTGACCGTCTGCAGAGCAGAAGTCCTGCTGCAGTTGGTAAGCGTAAACTCAAATCTAAGCTGCAGaagaagttccagtgtgtgtttgaggggattgctaaagcacGAAACACAACCGTTCTGAaccagatgttcacagagatctacatcgcagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccagaaaaccagacagaccagaaacaataatcagacgagaagacatctttaaagcaTCACCTGGAAGAggtgaaccaatcagaacagtgatgacaaggggagtggctggcatcgggaaaacagtcttaacacagaagttcactctcgactgggctgaagacaaaACCAACCAAGACATCCAGTTTACATTTCCATTCactttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtTGAACTTGTTGATCgcttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagagttcccggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgatgttacagagtccacctcagtgggtgtgctgctgacaaacctcatcagggggaatctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggccagcagaatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctagAGGATGTGTTGCAAACCACAGAGCGAGGAgggctgcccaagaccctgactgagatgtacatccatttcctggtggttcagtccaaagtgaagaaagtcaagtatgatggaggagctgagattgatccacactggagtccagagagcaggaagatgatggagtctctgggaaaactggcttttgaggagctgcagaaaggcaacctgatcttctatgaatcagacctgatagagtgtggcatcgatttcacagcagcctcagtgtactcaggagtgttcacgCAGATccttaaagaggagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatatgacattcatcaactctggagtcaacctgctgtcagaaGAACTAACAACATCCTGGTGGCCTAAAGAGATCAGAGACAAACCAACACAtttctaccagagtgctgtgaacaaggccttacagagtccaaatggacacctggacttgttccttcgcttcctcctgggtctttcactgcagaccaatcagacTCTTCTACAAGGTTTGCTGACACAGATAGGAAGTAgctcactgaccaatcagaaaacagttgagtacatcaagaagaagatcagtgagaatctttctgcagagagaagcatcaatctgtttcactgtctgaatgaactgaatgatcatTCTCTAGTGGAGCAGATCCAACAGTCCCTGAGATCAGGATGTCTCTCCGCAGATAAAATGTCTCCTGcgcagtggtcagctctggccTTCATCTTGCTGTCATTAGAAAAAgatctggacgtgtttgacctgaagaaatactcagcttcagaggaggctcttctgaggctgctgcctGTTGTCAAAGcatccaacaaagctctgctgagtggctgtaacctgtcagagagaagctgtgaaggtCTGTCCTCaattctcagctcccagtcctctagccTGAGAGAGCTGGATGTGAGTAACAAcgagctgcaggattcaggagtgaagcagctgtcggctggactgaagagtccacactgcagactggaaactctcaAgctgagtggctgtaacctgtcagagagaagctgtgaagttCTGGcttcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgagctgcaggattcaggCGTGAAGCAGCTGTCGGCTGGACTGAAGAGcccacactgcagactggacactctcagtctgtcaggctgtctggtctcagaggaaggctgtacttctctggcctcagctctgagctccaacccctcccagCTGAGagtgctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtcAGCTGGACTTAAGGATCCAAactggagactggacactctcagGATGGATCATGGTGGACAACAGAGACTGAGACCTGGTGTgaggaagtaTGTCTGTGAATTggaactggacacaaacacagtaaacatatacctcaaactgtctgacaacaacaggaaggtgacacatGCGGGAGAGGATCAGTcgtatcctgatcatccagacagATTTGACTCCTttcctcagctgctgtgtagaaatggtctgactggtcgctgttactgggaggtcgagaggagaggagaggttcatatatcagtgagttacagagaaATCAGAAGGAAAGGAGGCAGTAATGACTGTTGGCTTGGAGGGAAttatcagtcctggagtctgatgaGCAATGATGATGGTAACTCTGTCTGGCACAATAACAGAGTAACAGACCTcacttcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcactctgtccttctacacagtctcatctgactcactgatccacctccacaccttcaacaccacattcactcaaccTCTTTATCCTGGATTTGGGCTCTGGTCAGAtagttcctcagtgtctctttGTCCTCTGCAGGACTGAGAGTCTCTCCTGTGGACAGAAACTTACTGAAGATCAGTTGCTgttcaccatcacacacactctgcatgGTGAAGCACATCTGTCTCAGACTCAAACACTAAACATTCATTTGTCTGATTTCATCTCTTTGATTATcaacatttaaactgtttaacTAGAAACACTTTATGATTCCTGTCATCAGCTGCCTCTCTTTACCTGAGGATACACTGTATAAAGCTGAGTGAATGTGATGTTACTTTACGTTTTTGGTAAATCTGTGTCCATGGTTACAAGCTGTACCAAGAGCTTCTCTGATCAGATGTGTGTTGTAATAAACCTTTATATTCAAGTCAGAACAACTGAGGCTCTGAGGCTGAGACTAAAATATTAAACTTAAAGTCTGAAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806133.1 True 4408 mRNA 0.48 11 41551091 41576503

Neighbor

gene id symbol gene type direction distance location
LOC120562396 NA coding upstream 5497 41541090 ~ 41545594 (+)
LOC120562404 NA coding upstream 49432 41500185 ~ 41501659 (+)
LOC120562390 NA coding upstream 231387 41239083 ~ 41319704 (+)
LOC120562388 NA coding upstream 256710 41220084 ~ 41294381 (+)
LOC120562391 NA coding upstream 376245 41163743 ~ 41174846 (+)
LOC120561585 NA coding downstream 151063 41727566 ~ 41850702 (+)
LOC120562755 NA coding downstream 950993 42527496 ~ 42529482 (+)
LOC120562768 NA coding downstream 1087015 42663518 ~ 42666003 (+)
LOC120562762 LOC104963449 coding downstream 1187900 42764403 ~ 42768664 (+)
LOC120562761 LOC104963449 coding downstream 1211206 42787709 ~ 42800596 (+)
LOC120562420 NA non-coding upstream 11499 41539010 ~ 41539592 (+)
LOC120562422 NA non-coding upstream 21027 41529063 ~ 41530064 (+)
G80351 NA non-coding upstream 47851 41502345 ~ 41503240 (+)
G80348 NA non-coding upstream 58438 41491844 ~ 41492653 (+)
G80346 NA non-coding upstream 65022 41484572 ~ 41486069 (+)
G80364 NA non-coding downstream 37597 41614100 ~ 41615261 (+)
G80365 NA non-coding downstream 40406 41616909 ~ 41617366 (+)
G80363 NA non-coding downstream 61635 41638138 ~ 41697410 (+)
G80376 NA non-coding downstream 74004 41650507 ~ 41650950 (+)
LOC120561593 NA non-coding downstream 135152 41711655 ~ 41717691 (+)
G80337 NA other upstream 94733 41421356 ~ 41456358 (+)
LOC120562389 NA other upstream 157865 41377447 ~ 41393226 (+)
G80320 NA other upstream 190885 41356480 ~ 41360206 (+)
polr3glb NA other upstream 364146 41156474 ~ 41186945 (+)
LOC120562400 NA other upstream 538472 41007967 ~ 41012619 (+)
LOC120561589 NA other downstream 105910 41682413 ~ 41693005 (+)
G80410 NA other downstream 362995 41939498 ~ 42006594 (+)
G80682 NA other downstream 908832 42485335 ~ 42486009 (+)
LOC120562757 LOC104947480 other downstream 956421 42532924 ~ 42539601 (+)
LOC120562767 NA other downstream 1055904 42632407 ~ 42643990 (+)

Expression


Co-expression Network