opn9


Basic Information

Item Value
gene id opn9
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23803552 ~ 23808166 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806139.1
ATGGGAGACAGTGGCTCACAGAGGGGCTCCTGGTTTGTCCCCTCGTCCATCCACCCACTGTTCCTCTCCCAACTGTCCCCCTCTGCAGACCTGGCCGTCGCTGTCTTCCTAACCTTCACAAGTGTTGCATCAGTGCTGGGCAATGGCACAGTGTTGTTAGTCTACTGTTGGAAAAGAAAGAAGCTCAGACCACCAGAGCTCATGACCATCAACCTGGCTCTCTGTGATCTTTGCTTCAGCCTTTTGGGAGGGCCATTTTTCATAATTTCCAGtcTGTGTCATGCCTGGATGTTTGGGGAGACAGGGTGCCTTTGGTATGGCATTCAGGGCTTTGTGTTTGGCATTGGCTCTCTGCTCACCACCTGTCTCATCTCTCTGGACCGTTGCCTGAAGATCTGCTGCTTAAGATATGGCCAATGGATTGAGAGGCGCCATGTGTATCTATCCATAGCACTGGTGTGGGTTTACACATTGTTCTGGGCCTTGCTGCCTGCTTTTGGCTTTGGAAGTTATGGACCAGAACCTTATGGGACCAGCTGCACCATCAACtgGTGGAAAATGAGGTCGTCTCTAAATGACAGAATCTATATTTTCCTTATCCTGGTATTATGCTTCGGATTTCCTGCACTCACCATGGTCGCTTCATATGTGGCCATCCTTCTGAAGGTCTACAGATCTAATCACACTCTGGCATCTATACCATCCTCCTCCGTCAATCACACTAGCAAAAACCTGAGACCTACAAAGATGGCTGCTGTGGTGTGCACCACACTCTTTCTGGCCTGGATGCCCTATGCCACAGTGTCTCTGATCTCTGCACTCATAAGCAGAGATGACCCAGAGGCATCGTCACAGACTGTGGTGGAGGAGTCCACTGGTATGGCCTCAAGCTCTCCAAATGCTTCAAAGATCCTAGACATCCCCTCACTGTTTAACTGGACAGCTACAGAATATTACAGACAAATCTACCATAATTCTGAGAGCAAGTGGAGCGATGTGAACAACATGAATCCAGCCTCCATCACCGGCCTGAGTGATGCCATGCTCAGGTCCACCCTGGACAAAGAAGCCATACCAGTGACCCGGAGCCCCCAGCCATTCTCCTGTCTCCCACCTGTAGTCACCTTGATTCCTGCTTTGTTTGCCAAGTCCCACATCATGGTCAACCCTTTAATCTACCAGATCATGAACATGGAGTTCAGGCATGATGTCTTTGTGATGGTGTTTGGCCAAGAGAAGGCAGAAAGGAGGCGAATGCAGGGGAGGAAGAAGAGCTTATGTGAAAGGAGAATCAGCCTCTACTACCGCCAGAGCTGGAAGAGGAAAAGGAGCAATATATCCTTTTCTGTggaaagagaaaacagaaatCTAAAGAAAGAGAACAACCGAGGGAACAGGAGTGGAGGAAGAGGAACAGACTCCTGGGCAGATAATAACTCAGTAGGGGCTGATGCATTGGACCTTTCCTCCTTTGACACCCGAGGCAACAGGGAGAGACACGGCAGCATCAGTAgacagatagatggatag

Function

NR:

description
melanopsin-B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806139.1 True 1530 mRNA 0.50 8 23803552 23808166

Neighbor

gene id symbol gene type direction distance location
gapdh gapdh,LOC102791742 coding upstream 1365 23797078 ~ 23802187 (+)
wu:fj39g12 LOC104929004,LOC100710783,LOC101474397 coding upstream 10459 23791000 ~ 23793093 (+)
ncapd2 ncapd2,LOC102792512 coding upstream 13992 23762873 ~ 23789560 (+)
LOC120563206 NA coding upstream 36085 23767185 ~ 23767467 (+)
LOC120563205 NA coding upstream 38907 23764315 ~ 23764645 (+)
iffo1b iffo1,LOC102791264 coding downstream 414 23808580 ~ 23822343 (+)
si:dkey-260g12.1 NA coding downstream 15158 23823324 ~ 23829685 (+)
tnfrsf1a NA coding downstream 28615 23836781 ~ 23843959 (+)
plekhg6 NA coding downstream 35911 23844077 ~ 23858278 (+)
mrpl51 mrpl51,LOC102789637 coding downstream 61471 23869637 ~ 23871714 (+)
LOC120561968 NA non-coding upstream 169718 23631416 ~ 23633834 (+)
G75301 NA non-coding upstream 309075 23494213 ~ 23494477 (+)
G75227 NA non-coding upstream 362326 23437096 ~ 23441226 (+)
G75199 LOC103372680 non-coding upstream 449377 23351145 ~ 23354175 (+)
G75197 NA non-coding upstream 452785 23346840 ~ 23350767 (+)
G75427 NA non-coding downstream 75011 23883177 ~ 23884631 (+)
G75483 ptpn6 non-coding downstream 135327 23943493 ~ 23948403 (+)
G75493 NA non-coding downstream 164161 23972327 ~ 23975734 (+)
G75517 NA non-coding downstream 219717 24027883 ~ 24031339 (+)
G75523 tpi1,tpi,LOC102304959 non-coding downstream 240759 24048925 ~ 24052956 (+)
casp2 casp2,LOC102795506,LOC103369458 other upstream 152056 23641555 ~ 23651496 (+)
trpv6 LOC104929027,LOC104960406,LOC103388006,LOC107082237 other upstream 232309 23560848 ~ 23571243 (+)
LOC120562612 LOC103367657,LOC105025867,LOC103136704 other upstream 309518 23491125 ~ 23494034 (+)
LOC120562293 LOC103360151,LOC102310947,LOC102785150 other upstream 720405 23070587 ~ 23083147 (+)
cnot3a cnot3 other upstream 892032 22900089 ~ 22911520 (+)
LOC120563047 vamp1,LOC104928996 other downstream 65743 23873909 ~ 23879415 (+)
atn1 atn1 other downstream 218749 24026915 ~ 24039427 (+)
lpcat3 lpcat3 other downstream 248271 24056437 ~ 24073698 (+)
G75644 NA other downstream 626973 24435139 ~ 24436819 (+)
dedd1 dedd2 other downstream 712569 24520735 ~ 24534276 (+)

Expression


Co-expression Network