LOC120562442


Basic Information

Item Value
gene id LOC120562442
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 30212639 ~ 30216695 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806155.1
GCGGAAATGATTTGGCTCGGGCCTAAATCTAATTATTTCCACAGTGATAGCTGCCACATTTTTAATGAGGAAGTGTGTGGAGCTTCTGAAGGATGGATTTGCGACCTCAAACACTGAAAATAGatctactgcagctttaaatttGCAATAAAAGTAAATATTCAGTGGTGAGCAGAGAGATAAATGACAAGTAAGTGTACAGAAGTGAAACTGACTTCCCAAATAACGGACGTGGCATTGCATGAGAAGAGTAAAACCACACTGACCAcgtttctgtttttctcatttGCATGTAATTGTGGTGCTGAGATGTATCTCCCATTAAAATTTTTTTAGCACGACCGCTCTAAAAACTCTGCCAAACAAAGCCTCTCTCATCTGTTTTAATAGGTATCGTAAATTAGTATCATAAATTGTCACACTGTTTTCCTTCCTGAAGATTTATCTGCGTGAACCTACCTTGAACCAGTCCTTCTTTTCTGCGGAGCCTCtttcttatctatctatctttcacGTCATTAAAGTGAATGGAGGCATTGTTAGAAAATGTGTCGCTTTATTCTCCGAGATCTCGTaactgctttcagaatcaactcacaGAGGTCTTGCCAGTAGATGTGAGGATATGAACCACAAACAATCAAACGCAATGACTGTGACGAAACCTGAAAGACCTGTTCATCTCTGCACTGCTCTTGTATAAGCATTTGAATAATTTGATTTACGGGAAAGGAGGATGTAGTTTAGTTTCAGGGTTTGAAAGGGTTTTAGTAGCGAGTCTGCATGCAGCATGTGACGTTGTTTTCAGTGTTTAAGAGATGATGGGACTTTATTTTCTGCTCAAACTCACAGTCTCTGCTATTTTACTCTGCAGTAGACCAGCAGGTGGCTATGTATATCAGATGATATATGACTGTGAGTATGGTGACAACATCACCGACATGGTCTTCTttgtaaaaaacatatttaaccaGAAGATTAACACCCAGTATGACTCTCGGGTTGGGAAGTATGTCGGCTTTGGAGAATATGGCATGACGAACGCTGCCCATTataacagccagcagtggaaaATGGATGAAAGAAAAGCTCAAGTGGAGACTCTTTGCAGATACAACGCAAGATTATTCAGAAGGAGCACACTGGATCGAAAAGTGCGTCCGACTGTCAAGGTCCATGAGCCCGAGCCAGCTGACTACGGGAAGCGGTCCATGCTTGAGTGCAGCGCTATGGGGTTCTTCCCTCAGGAAGTGAGGCTGAGCTGGCTGAGAGACGGCGTAGAGGTCACCACTGATGTGTCGTCTACAGATGTCTTGGCCAATGGGGACTGGAGCTTCCAGCTGCACTCTTACCTGGAGTTCACACCCAGAAGAGGGGAGAGGGTGAGCTGCAGGATCAACACAATAAAACATGACAACGTTCCCTCTAGAGTGCTTGCCCCCGcctctcagacagacagagtccTCCATTGTTCCGATGTGACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806155.1 True 1487 mRNA 0.44 4 30212639 30216695

Neighbor

gene id symbol gene type direction distance location
LOC120562234 NA coding upstream 403 30205177 ~ 30212236 (+)
brd2b LOC104928643,LOC103356858 coding upstream 7583 30186346 ~ 30205056 (+)
tap1 tap1 coding upstream 30497 30170014 ~ 30182142 (+)
LOC120561633 NA coding upstream 75070 30136281 ~ 30137569 (+)
pbx2 LOC103356852,LOC108245987,LOC101487230,LOC102193020,LOC100704063 coding upstream 79103 30125926 ~ 30133536 (+)
LOC120561719 vmo1 coding downstream 2302 30218997 ~ 30223524 (+)
LOC120562225 LOC103356864 coding downstream 146012 30362707 ~ 30390432 (+)
si:dkey-82o10.4 NA coding downstream 488336 30705031 ~ 30713391 (+)
LOC120562210 LOC103357958,LOC107379173,LOC102233395,LOC103388353,LOC100705137,LOC103477709,LOC106523089 coding downstream 692335 30909030 ~ 30949188 (+)
LOC120562211 ube2e1,LOC106534515,LOC101480162,LOC103357960,LOC100705406 coding downstream 734538 30951233 ~ 30965417 (+)
LOC120562092 NA non-coding upstream 91543 30118008 ~ 30121096 (+)
G77198 LOC103388947,LOC102796900,LOC101464846 non-coding upstream 313886 29894234 ~ 29898753 (+)
G77172 NA non-coding upstream 399098 29812931 ~ 29813541 (+)
G77114 bola1 non-coding upstream 627639 29582757 ~ 29585000 (+)
G77097 NA non-coding upstream 747087 29464612 ~ 29465552 (+)
LOC120562235 NA non-coding downstream 53 30216748 ~ 30218603 (+)
G77260 NA non-coding downstream 181581 30398276 ~ 30402704 (+)
G77399 NA non-coding downstream 760046 30976741 ~ 30977081 (+)
LOC120562708 NA non-coding downstream 761632 30978327 ~ 30988733 (+)
LOC120562710 NA non-coding downstream 798438 31015133 ~ 31016447 (+)
G77239 NA other upstream 88001 30123702 ~ 30124638 (+)
rgl2 LOC101463702,LOC100700084,LOC102303531,LOC102796597 other upstream 103094 30073937 ~ 30109545 (+)
G77028 LOC104942601 other upstream 800226 29404008 ~ 29412413 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other upstream 822586 29384135 ~ 29390053 (+)
G77009 ubqln4 other upstream 882381 29328789 ~ 29330258 (+)
LOC120562443 NA other downstream 134800 30351495 ~ 30360588 (+)
rab5ab rab5a,LOC104947906,LOC103388351,LOC105936747,LOC100704868,LOC101078239,LOC104931780 other downstream 470643 30687338 ~ 30731609 (+)
G77447 NA other downstream 918134 31134829 ~ 31136146 (+)
G77682 tbx20 other downstream 1759623 31976318 ~ 31979909 (+)
LOC120561717 NA other downstream 2188438 32405133 ~ 32421472 (+)

Expression


Co-expression Network