LOC120562448


Basic Information

Item Value
gene id LOC120562448
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 33115217 ~ 33130559 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806160.1
ACCAAACAGATCAGCGCGATGCAGCTTTCTGTTTCTGAAGAGGAAGAAACTGCAACAGCTCATGTGACACTTTCAtcataaataggcccatcaACCAGGAAAACACCATCAGAGGGTTCAACACACAGCGGCGATGACAAGTCCCACGGACCAACgcGTGATGTTTGCGAGCCTGCTGCTCGTCTCCCTGTGTGTCGGGGCAGCGGCCATGATTGACAGCCGGCTGGACGACCACTGGGAGCTGTGGAAGAAGACGCACGAGAAGAAGTACCAAAATGAAGTGGAGGATGTGCGCCGCAGGGAATTGTGGGAGAAGAACCTGATGCTCATCACCATGCACAACCTGGAGGCCTCGATGGGGCTTCACACCTACGACCTCGGCATGAACCACATGGGAGACTTGACACAAGAGGAGATCCTGCAGTCGTACGCCACACTCACCGTTCCCACCGACATCCAGAGGGCACCATCTGCCTTTGTGGGGACATACGGCGCTGATGTACCCGACACCATGGACTGGAGACAGAAGGGCTGTGTCACCAGTGTTAAGATGCAGGGTTCGTGTGGCTCCTGCTGGGCCTTCAGTGCCGCCGGGGCCCTGGAGGGCCAGTTAGCCAAGACAACAGGGAAGCTGGTGGACCTCAGCCCCCAAAACCTGGTGGACTGTTCAGGCAAATATGGCAACTTTGGCTGCAATGGTGGCTTCATGCACAAAGCCTTCCAGTACGTCATCGACAACCAGGGCATCGACTCGGACGCCTCATACCCCTACACGGGACAGTCCCAACCGTGCCGCTACAACCCGAAGAACCGCGCCGCCAACTGCTCCAGTTACAGCTTCCTGCCTTATGGGGACGAGGGTGCTCTGAAGCAGGCGCTTGCCACCATTGGACCCATTTCAGTGGCGATCGACGCCACGAAGCCCAGATTCACCTTCTACAGGAGTGGTATGTTACACATCATCAGCTGCACAGGCTCTCATCTTCATTGCACTAGTACAGTGCCTGTTCAAAATGGGGAGATCTTAATATatagggctgcttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806160.1 True 1045 mRNA 0.56 6 33115217 33130559

Neighbor

gene id symbol gene type direction distance location
mcl1b NA coding downstream 94142 33018705 ~ 33021075 (-)
tmod4 tmod4,LOC102789303 coding downstream 168989 32915320 ~ 32946228 (-)
lysmd1 NA coding downstream 209744 32902016 ~ 32905473 (-)
ptpn23a ptpn23 coding downstream 711795 32376916 ~ 32403422 (-)
LOC120562214 NA coding downstream 950701 32161017 ~ 32164516 (-)
ctsk ctsk,LOC107086845,LOC106920373,LOC103156711,LOC106949137,LOC103477640 coding upstream 3551 33134110 ~ 33153043 (-)
LOC120563172 NA coding upstream 165691 33296250 ~ 33299540 (-)
atg5 atg5,LOC102785391 coding upstream 385135 33515694 ~ 33556965 (-)
LOC120561933 NA coding upstream 437299 33567858 ~ 33581386 (-)
eaf1 eaf1 coding upstream 749214 33879773 ~ 33893809 (-)
G77949 NA non-coding downstream 13680 33099816 ~ 33101537 (-)
G77910 NA non-coding downstream 220427 32867146 ~ 32894790 (-)
LOC120562114 NA non-coding downstream 296671 32784245 ~ 32818546 (-)
G77850 NA non-coding downstream 426586 32688412 ~ 32688631 (-)
G77847 NA non-coding downstream 648487 32466172 ~ 32466730 (-)
G77959 NA non-coding upstream 1684 33132243 ~ 33132533 (-)
G77984 s100a1,LOC105028680,LOC106605324,LOC107587912,LOC107689908,LOC107663298,LOC107598020,LOC107717776 non-coding upstream 154354 33284913 ~ 33286592 (-)
G77994 NA non-coding upstream 329463 33460022 ~ 33460244 (-)
G78064 LOC103362578,LOC107379244 non-coding upstream 354749 33485308 ~ 33486895 (-)
G78061 NA non-coding upstream 435236 33565795 ~ 33588250 (-)
ensab ensa,LOC103369031,LOC100695493,LOC101487776,LOC102787866,LOC102291346,LOC102199757,LOC108243249 other downstream 82322 33022098 ~ 33032895 (-)
sema6e sema6c,LOC103360390,LOC104932808,LOC100704625 other downstream 470248 32480644 ~ 32644969 (-)
LOC120561540 LOC104957162,LOC106526711,LOC102237165 other downstream 680350 32425365 ~ 32434867 (-)
tbx20 tbx20 other downstream 1124852 31976484 ~ 31990365 (-)
LOC120562592 dgkb,LOC102796570 other downstream 1488336 31612436 ~ 31626881 (-)
LOC120561932 NA other upstream 459962 33590521 ~ 33602948 (-)
LOC120561752 NA other upstream 964692 34095251 ~ 34097590 (-)
G78245 NA other upstream 965084 34095643 ~ 34146296 (-)
LOC120561744 NA other upstream 998979 34129538 ~ 34132432 (-)
LOC120561747 NA other upstream 1130967 34261526 ~ 34273652 (-)

Expression


Co-expression Network