LOC120562454


Basic Information

Item Value
gene id LOC120562454
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 35875127 ~ 35883935 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806167.1
ATGTTCAGGATGAACAGAAATCCACAGGAGGAAAATGAGGATATCGAGGAAGCAGCTAACTATGTTAATGTTTCAGCATGCACTGTGGAGAAAATGGCAGCTCGTCCAGACCAGAGgtttctctgcttctctcagTATTTTCCACCGATAGCAGTGTGTTGGCTGATACTGTTGGTCATCATGGGGCTGCGTATCCACTttaCCAATCGCAACCTCAACGACAAATTCAGCGTCTTAGAAAACCCGATCATAGACCTGACTGCAGTAAACCAGGAGCTGGAGACACGAAACCAGGAGCTGAAGACGGAGAGAAACAAGTTAAGAggacaaatacaaaacatcagTCGAGCTCAGTGGAGCATTGATGAATACTGCCCCAAAGTAAATAACGAGAGACGGTGTAGAGATTGTCAGGAGAGCTGGAGATTCGTCATCAAGTCTAGCTGCTATGTGATCAATGACGTTTATCCTCCTGATCAGAAAACCTGGGAAGAAGCTCGAGAAGACTGCAGAGCACGGGGATCAGATTTGGTTGttgtagatgatgaagatgaaaagAATGCACTCCGTCGTTACAGCCGGTACGGATCCTGGATTGGCCTGAGAGCTGAAGGAGGGAGATGGAAGTGGATCGATGGAAGTGATCTGACTGAAAGTGTCACCTACTGGATAGATGAACCACCACCTCCTACTGATGATTGatgagagggacagacagactgctcagcttcctgtttcctgtgtgaCAGGTTATATTGTTGCTACTCATGAGCCAAAATGGAGACACAGCatcacttgtttttcttcagcaTTTAATGTAAATCATATTAATATGTAGAGTGTTTAATCTATCTAGAAGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806167.1 True 863 mRNA 0.45 8 35875127 35883935

Neighbor

gene id symbol gene type direction distance location
LOC120562277 NA coding upstream 18391 35849473 ~ 35856736 (+)
LOC120562274 NA coding upstream 245046 35621760 ~ 35630081 (+)
ccne2 LOC103358269 coding upstream 328379 35535047 ~ 35546748 (+)
tp53inp1 NA coding upstream 347118 35508333 ~ 35528009 (+)
nagpa NA coding upstream 385650 35448568 ~ 35489477 (+)
LOC120562276 NA coding downstream 12415 35896350 ~ 35900892 (+)
LOC120563160 LOC104935873 coding downstream 140691 36024626 ~ 36026571 (+)
dek LOC102312342,LOC102210945 coding downstream 208264 36092199 ~ 36110132 (+)
LOC120563175 NA coding downstream 227115 36111050 ~ 36129242 (+)
LOC120563177 NA coding downstream 294272 36178207 ~ 36190415 (+)
G78674 NA non-coding upstream 53486 35821290 ~ 35821641 (+)
G78669 NA non-coding upstream 61520 35775272 ~ 35813607 (+)
G78662 NA non-coding upstream 156176 35717952 ~ 35718951 (+)
G78655 NA non-coding upstream 183482 35648530 ~ 35691645 (+)
G78653 NA non-coding upstream 231774 35642906 ~ 35643353 (+)
G78705 NA non-coding downstream 24091 35908026 ~ 35908235 (+)
G78706 NA non-coding downstream 24885 35908820 ~ 35909069 (+)
G78707 NA non-coding downstream 44505 35928440 ~ 35928896 (+)
G78716 NA non-coding downstream 78838 35962773 ~ 35963505 (+)
G78736 NA non-coding downstream 150413 36034348 ~ 36034652 (+)
LOC120562275 NA other upstream 101139 35743295 ~ 35773988 (+)
G78594 NA other upstream 466445 35405375 ~ 35408682 (+)
LOC120562567 NA other upstream 1018595 34839157 ~ 34856532 (+)
G78200 NA other upstream 1330748 34529355 ~ 34544379 (+)
sh3bp5b sh3bp5,LOC102783023 other upstream 1832479 33990542 ~ 34042648 (+)
G78759 NA other downstream 226916 36110851 ~ 36190839 (+)
G78772 NA other downstream 374225 36258160 ~ 36350995 (+)
LOC120563181 LOC107378893,LOC103370072 other downstream 508317 36392252 ~ 36465230 (+)
LOC120562456 dennd4b other downstream 697030 36580965 ~ 36670029 (+)
LOC120562457 NA other downstream 802001 36685936 ~ 36703993 (+)

Expression


Co-expression Network