LOC120562465


Basic Information

Item Value
gene id LOC120562465
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37578597 ~ 37579855 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806179.1
aacctgagcttcaacatctggaacaagatgaaggacgaggtctcctacactcctgtgattctggacccaaacactgctATGTCAGACTTCATCCTGTCTGATGAACTGACCTGTGTGAGAAAACTAAAGAGATGGGGAGGGCAACTGCAACTTCCTGGTAATCCTGAGAGGTTGGATTGTGACTACAAAGgtgtcctgggctctgagggctttgactcagggactcacagctgggatgTCAAGGTCGGAAACAGTGCATTCTGGGAACtgggtgtgttagcagagtctgtccagaggaagggagacaTTCAGTCTGGAATATGGAGCATAGTGTTCAAAGAAGGCGAATACTCAGCACGGTCACCACCAGATCCAGAAACCGATCTCGAGCCGGACACGCCGCCCCGGAGGATCCGAGTGACTCTGGACTGGGACGGAGGAAAGCTGTCGTTCTATGATCTTtgtactaacacacacatacacaccttcacacacactttcactgagaagCTGTTTCCATTGATTGACACTGAGGAGCACATGTTTGTTTTACCACTGAAGGTCTGTGTGACTGTAGAACAGATTAATGATTATGATGATTATGATGGTCATGGTGGTTATGAGGATTATGATGGTAATgaagatggtgatgatgatgatgattatcaTTTAATTATgggttaa

Function

GO: NA

KEGG:

id description
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806179.1 True 684 mRNA 0.47 2 37578597 37579855

Neighbor

gene id symbol gene type direction distance location
LOC120562860 NA coding upstream 166 37577479 ~ 37578431 (+)
LOC120561682 NA coding upstream 10568 37565756 ~ 37568029 (+)
tmem116 NA coding upstream 153777 37404963 ~ 37424820 (+)
LOC120561882 NA coding upstream 186605 37387117 ~ 37391992 (+)
LOC120562463 NA coding upstream 200813 37362224 ~ 37377784 (+)
LOC120561715 NA coding downstream 3268 37583123 ~ 37586138 (+)
LOC120562469 NA coding downstream 126250 37706105 ~ 37709961 (+)
LOC120561575 NA coding downstream 137513 37717368 ~ 37720029 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding downstream 154870 37734725 ~ 37742466 (+)
LOC120561705 NA coding downstream 247034 37826889 ~ 37845714 (+)
LOC120562911 NA non-coding upstream 17811 37556675 ~ 37560786 (+)
G79011 NA non-coding upstream 35052 37542905 ~ 37543545 (+)
G79004 NA non-coding upstream 48000 37525876 ~ 37530597 (+)
G78999 NA non-coding upstream 78487 37499890 ~ 37500110 (+)
G78998 NA non-coding upstream 83994 37492806 ~ 37494603 (+)
G79262 NA non-coding downstream 27330 37607185 ~ 37645567 (+)
G79284 NA non-coding downstream 153353 37733208 ~ 37797202 (+)
G79297 NA non-coding downstream 179380 37759235 ~ 37760174 (+)
G79305 NA non-coding downstream 192385 37772240 ~ 37775336 (+)
G79309 NA non-coding downstream 215805 37795660 ~ 37872187 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 27995 37530690 ~ 37550602 (+)
G78989 NA other upstream 145918 37431171 ~ 37432679 (+)
G78888 NA other upstream 638643 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 874604 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 908568 36580965 ~ 36670029 (+)
cmtm7 cmtm7 other downstream 299061 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 476561 38056416 ~ 38145804 (+)
G79351 NA other downstream 590199 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 602295 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 721570 38301425 ~ 38305892 (+)

Expression


Co-expression Network