LOC120562469


Basic Information

Item Value
gene id LOC120562469
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 37706105 ~ 37709961 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806183.1
ATGGCCACGTCAGagagaatagcagctctttcagacacagtcagagtcacagaggagcagctgagagccAAAGATGTCTCATTCCTGATCAGctacaaggctgcagtggaaagagtccagcagcgccccctgctggatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacGAGGTCTCCTACACTCCTGTGATcctggacccaaacactgctATGTCAGACTTCATCCTGTCTGATGAACTGACCAGTGTGAGAAAACTAAAGAGATGGGGAGGGAAACTGCAACTTCCTGGTAATCCTGAGAGGTTGGATTGTGACTACAAAGgtgtcctgggctctgagggctttgactcagggactcacagctgggatgTCAAGGTCGGAAACAGTACATTCTGGGAACtgggtgtgttagcagagtctgtccagaggaagggagacaTTCAGTCTGGAATATGGAGCATAGTGTTCAAAGAAGGTGAATACTCAGCACGGTCACTACCAGATCCAGAAACCGATCTCGAGCCGGACACGCCGCCCCGGAGGATCCGAGTGACTCTGGACTGGGACGGAGGAAAGCTGTCGTTCTATGATCTTtgtactaacacacacatacacaccttcacacacactttcactgagaagCTGTTTCCATTGATTGACACTGAGgagcacatatttgttttaCCACTGAAGGTCTGTGTGACTGTAGAACAGATTAATGATTATGATGGTCATGGTGGTTATGAGGATTATGATGGTAATGAggatggtggtgatgatgatgatgattatcaTTTAATTATgggttaaaaaaagagaaaggtagagagaaggggaatgacatgcaacaaagggccgcaggtcgtaGTCAAACCTGAaaccgctgcgtcgaggagtaaacctctatacatgggcaTCCGCTCCACCAGAAGAGCTAACCAGGGGCCCAGACATCAGAAATACAGAATAACAATTGGCCCGATTTTTATGTAACTTGGTGGAGTGTAGCATGGACTGAGaaaaacccattacattttgatcTGAATCACGGggcggatacacaaattatttctgCATTAACATTGCGAGCTAcagtgtttttgttgcattCAGGTGGTGTAGGAATTATTGGAAAAACTAGTTCCTGACTGGGACTAAACTTATAAAGAAATACTTAGTGTCGATTGTTGCTAAGTTATTCATCTTGGCAACAAGATatgtggagttccccaaggctcaagCCTCGGCCCgcttattttacatttacatgctTCCATTAGGCCAAATTATACAAACCAACATCAACTATGCAGACGACAAATTTGGCTCTTTAAGGATaaggttgtttttgttaatgtcAAAGTTTATTCTTTTGAACAGACCTATCAGTACATTCATTGAGTTTAGAAGatatgcttgctcttgggggaattattggaattgttgggtctatgtaaattatagagtgtggtctagacttattctatctgtaaagtgagagataactcctgttatgatttcatactattacaatacaattgaattgaaaataaagatatattcagtTGTACAGTTATATTCTcttggtttttattttcttaatctcTTGGCAGTTTAATGacctgttgtgtgttgtgttgtactTTGTCtcaatattttaatgtttaatgtaacaTAAAACATAGCATTTTAAATGGCCTTGTTGTTGAAATGTGCCTGGCCATGTTCCaaattttgtgtttatttagtaACATGTTTCAGATATCTATTACCAATGTAACATAATCAGAATTAATAACTCCTGTTTCTGAATTATAATACCTGTCAATGaagctgtgattggtttacCATTAGATCATTGACTATACCTTTAACACCCTGCAGTGTTATCTTAAAAGTTTCTACATACCAGTAAAACTACTCTGTATCTCACTCTGTTAACATGTCAACAAACCACATGGCTCCACAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806183.1 True 2030 mRNA 0.41 3 37706105 37709961

Neighbor

gene id symbol gene type direction distance location
LOC120561715 NA coding upstream 119967 37583123 ~ 37586138 (+)
LOC120562465 NA coding upstream 126250 37578597 ~ 37579855 (+)
LOC120562860 NA coding upstream 127674 37577479 ~ 37578431 (+)
LOC120561682 NA coding upstream 138076 37565756 ~ 37568029 (+)
tmem116 NA coding upstream 281285 37404963 ~ 37424820 (+)
LOC120561575 NA coding downstream 7407 37717368 ~ 37720029 (+)
zgc:153896 LOC100708450,LOC103364589,LOC101166003,LOC106527367 coding downstream 24764 37734725 ~ 37742466 (+)
LOC120561705 NA coding downstream 116928 37826889 ~ 37845714 (+)
LOC120563002 NA coding downstream 547242 38257203 ~ 38259035 (+)
LOC120562479 LOC104959728,LOC104960595,LOC106675582 coding downstream 558316 38268277 ~ 38270068 (+)
G79262 NA non-coding upstream 60538 37607185 ~ 37645567 (+)
LOC120562911 NA non-coding upstream 145319 37556675 ~ 37560786 (+)
G79011 NA non-coding upstream 162560 37542905 ~ 37543545 (+)
G79004 NA non-coding upstream 175508 37525876 ~ 37530597 (+)
G78999 NA non-coding upstream 205995 37499890 ~ 37500110 (+)
G79284 NA non-coding downstream 23247 37733208 ~ 37797202 (+)
G79297 NA non-coding downstream 49274 37759235 ~ 37760174 (+)
G79305 NA non-coding downstream 62279 37772240 ~ 37775336 (+)
G79309 NA non-coding downstream 85699 37795660 ~ 37872187 (+)
G79317 NA non-coding downstream 165774 37875735 ~ 37876077 (+)
G79007 LOC103364590,LOC102314205,LOC102798195 other upstream 155503 37530690 ~ 37550602 (+)
G78989 NA other upstream 273426 37431171 ~ 37432679 (+)
G78888 NA other upstream 766151 36839222 ~ 36939954 (+)
LOC120562457 NA other upstream 1002112 36685936 ~ 36703993 (+)
LOC120562456 dennd4b other upstream 1036076 36580965 ~ 36670029 (+)
cmtm7 cmtm7 other downstream 168955 37878916 ~ 37888006 (+)
nek11 nek11,LOC102796711 other downstream 346455 38056416 ~ 38145804 (+)
G79351 NA other downstream 460093 38170054 ~ 38324620 (+)
LOC120562476 NA other downstream 472189 38182150 ~ 38188763 (+)
LOC120562481 NA other downstream 591464 38301425 ~ 38305892 (+)

Expression


Co-expression Network