LOC120562494 (LOC108250191,LOC103388058,LOC101480860,LOC107095276)


Basic Information

Item Value
gene id LOC120562494
gene name LOC108250191,LOC103388058,LOC101480860,LOC107095276
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39781236 ~ 39803887 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806203.1
ATGACCTCGACCAAGTTCAAGTGTGAAAGAgatgcagaggaggaggagacggtGATGATGGAGTCAGACTCTTCATGCATTAATCATGAAAAGACCAGTCAGGTTTCTGTCCAGaagaaacttcatcatcatcatcatcaccaccttCATCACCACCTGACCATCTGTGTGGGCGGAGCCTCGGAGCTTGCCTTCCTCCTAGAGCCCAGTGATGTCATCGCAGCAAGGgaccgccccctgctgctggACTGCCAGGTGGAGGGGGAGGGGCCGATCTCCATCACCTGGAGACGGAACGGCGTCCCCGTGCCGACGGGCACCATGGCGACGGTGCTGGCCAATGGAACGCTGCTCATCAGGAACTTCTCCAAGAGACGCGACAGCAACGAGACGGACGCCGGCGAGTACGACTGCGCCGCGCAGAACCGCTACGGGCGCCTCGTCAGCCGCAAGGCCCGCATACAGATCGCTTCCCTCCCTAAGTTCCTGTCCCACCCAGAGTCCGTCACAGTGGatgaagggggcgtggccagaCTCACCTGTCAGGTAAACGGAATCCCAGAAGCAAACATCACCTGGCAGAGAGACCGACTCCCGCTGAGCACCGAAGACCCCAGGTACACGCTGCTGCCTAACGGCGTGCTGCAGATCACCGCCGTCCGGAAGACAGACAGCGGTTTGTTCCGCTGCGTCGCCTCCAACATCGCCAACACTCGGTACAGCCGGGAGGCAACGCTGTCCGTCACCGTTGCAGGATCCCGGACGTACCGAGAACCCGTCATCCTGTCCGGCCCGCAGAACCTCACCATCAATGTCCACCAGACGGCCATCTTGGAGTGCATCGCCACGGGAAACCCCCGCCCCATCGTGTCCTGGAGTCGCCTCGACGGGCGGTCCATCGGCGTGGAGGGGATCGCCGTGCTGGGAACAGGAAACCTGATGATCTCCGACGCCACGCTGAAGCATTCAGGAGTTTACGTCTGTTCAGCCAACAGACCAGGAAGTAGATCCAGGAGAACGGCGCTGGGACGCCTCGTAGTACAAGccCCTCCAGGCTTCGTGCAGTGGCCCCAGTCCGTCTCCAGGCCAGCAGGGGGCAGTGCAGTCTTCAGCTGCACGGCGTCCGGCGCCCCAGAGCCCCACCTCATCTGGCTGAAGAACGGCAAGCTGCTGACGCCCAGCGGCAACGTCAAGCTGACCAATGGAAACACGACTCTGGCCATCACGCGTATTACCCCCGAGGACGAGGCCATCTATCAGTGCATCGCCGAGAACAGCGCCGGCACCAACCAGGCCAGCGCCCGGTTGGCCATCAGCCAGGGGGGGCCCGAGCTGCCCGAGGCCCCCGCCGGCCTGCAGGCCGCGCCGCTCAGCGCCACCAGCCTGCAGCTGACCTGGGACCAGCCGACAGACAGCGCCAGCCAGCAGATCATCGGATACGTACTGCACGTCAGACGCCTGGGGGAGCCAGACAGTGCTGAGCTGCAGGAAGCTGTCAGTAAGAGCACCTTCACACACGAGTTCAACAACCTGGAGGCTGCCACCACCTACTCTATCTACCTGAAGGCCTACTCCGCTCTGGGAGGCAGCCAGCAGTCCACCACCATCACAGCCACCACGCAGGGGGGCGTTCCCAGTCCTCCCAGTTTCTTCACTAAGGTCCTGAACCAGACGGCCATGCAGGTGtactgggagctgcccagtaaGCCGGGGAAGATGGAGGGCTTCAGACTGGAGTACCACGGGGTCTCTAACCCAGACCTCCAGGGGCAGGAGACCTTCCCAGCTCACATCAACACCCACACCATCTCTCACCTGGAGCCGGCGGCCGTGTACGAGATCAGGCTGTTGGCGTTTAACGGGAACGGAGACGGACCGTCCAACCGGCGCCTCGTGTCTCTGTCTGAGGGAGGAAACATCCCTACAGTCGGTCCGAGCTGTAACTGCGATCAGTCTCGTGGCTCCGTGTCGACTCTGCTGGTCGGTGTTCACAGCGGCCTGGCCTGCATCCTCTGCTGCCTGCTCTTCATCCTGCTGGGCTACCGACGCAGTCTCTTCTGCAGGAAGTCAGCCAGCTGGGAGACTCCGCCCACCCTGAATGATGTCACAGTTGCTAAAGGTCGCACACCTGAGAGCATCGAGCTGagccagAGATGTGACTCCGCCCCTCCTCCAGTGATGGTCATGGTTGAACCGAGTCTACCCGTCCAGCCCGGCACAGGCAGCGGATAGAACACcacattcttcttcctcctcctcctcctcctcctcctcctcctc

Function

NR:

description
PREDICTED: immunoglobulin superfamily DCC subclass member 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806203.1 True 2280 mRNA 0.62 15 39781236 39803887

Neighbor

gene id symbol gene type direction distance location
LOC120563008 NA coding upstream 354116 39425328 ~ 39427120 (+)
LOC120563011 syt11,LOC102778393 coding upstream 361563 39391948 ~ 39419673 (+)
LOC120562489 NA coding upstream 502733 39265833 ~ 39278503 (+)
LOC120563022 NA coding upstream 750402 39020810 ~ 39030834 (+)
LOC120563021 NA coding upstream 771660 38995153 ~ 39009576 (+)
LOC120562359 NA coding downstream 7968 39811855 ~ 39828704 (+)
LOC120562496 LOC103369586 coding downstream 120438 39924325 ~ 39979365 (+)
LOC120562361 LOC103369586 coding downstream 279143 40083030 ~ 40093260 (+)
si:dkey-15h8.17 NA coding downstream 307546 40111433 ~ 40113823 (+)
LOC120562363 NA coding downstream 335846 40139733 ~ 40152085 (+)
G79923 NA non-coding upstream 1371 39761259 ~ 39779865 (+)
G79918 NA non-coding upstream 3142 39713213 ~ 39778094 (+)
LOC120562367 NA non-coding upstream 57252 39723490 ~ 39723984 (+)
LOC120562368 NA non-coding upstream 62397 39714930 ~ 39718839 (+)
G79913 NA non-coding upstream 105919 39674723 ~ 39675317 (+)
LOC120562365 NA non-coding downstream 61890 39865777 ~ 39869961 (+)
G79944 NA non-coding downstream 211672 40015559 ~ 40037161 (+)
G79953 NA non-coding downstream 226488 40030375 ~ 40099065 (+)
G79957 NA non-coding downstream 253126 40057013 ~ 40108481 (+)
G79960 NA non-coding downstream 316283 40120170 ~ 40120511 (+)
LOC120562364 LOC108234077 other upstream 9816 39765173 ~ 39771420 (+)
G79722 LOC100712425 other upstream 317395 39460448 ~ 39463841 (+)
G79713 NA other upstream 326944 39433461 ~ 39454292 (+)
LOC120563015 NA other upstream 434804 39312639 ~ 39346432 (+)
LOC120563019 NA other upstream 449720 39321432 ~ 39331516 (+)
LOC120562498 LOC103369894 other downstream 487095 40290982 ~ 40345060 (+)
G80003 NA other downstream 512852 40316739 ~ 40321067 (+)
LOC120562499 LOC103374404 other downstream 574795 40378682 ~ 40441316 (+)
LOC120562387 NA other downstream 841772 40645659 ~ 40656567 (+)
LOC120562400 NA other downstream 1204080 41007967 ~ 41012619 (+)

Expression


Co-expression Network