LOC120562505 (LOC100690881,LOC102207812,LOC101474950)



Basic Information


Item Value
gene id LOC120562505
gene name LOC100690881,LOC102207812,LOC101474950
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41399810 ~ 41409787 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039806212.1
ATGGCAGCGACAGAGCAGCtccagaTCCCTCCCCTGAGCCTCGACCTATCAGGAGCCAGCGGGGGCGGGGCTAAGAAGCGTCTGGCGGCCCCGCCCCTCAGCCTATCGCTGAGCCGCGGGGACTCGGTGGACTTCTCGGCCGCGGCGCTGTCGGCCACGCCAGACGAGACGCTGTCCTTCGACTTCAACCTGGAGGCCCTGGAGACGCCATCAGGCAGCGAGACGGGCACGCTGGGGGGGGGGCACGAGCTGGAGTGGGAcgACGACCTCCCCTGCATGGCGAGGGCTGGGGGCGTGGCCCGGAGCCCCGTGGAGCCGTTGGGGGGTCTGGAGGGTCTCGGGGGTCTGGACCAGGTGGACACTAGGGGGCGTCTCTGGAGGAGGTTCTCCATCAACGGACACGAGTTCCACGTCAACATGAGCGTCCTGGAGCCATACCTGCAGGTGCTGTCCCacggagGTTACTGTGGAGACGAGATGAACGCCGTCATCCTCTTCACCTCCTGTTACCTGCCGGAGAACACGGTGGAGAACTACGAGTACGTCATGGACAACCTGTTCAGgtacATTGTGGGGACCTTGGACCTGATGGTATCAGAGAACTACCTGCTGGTCTACCTGTGTGCCATGGCGCCCAGAAACAAGCTGCCATCCATCCGCTGGCTGCACCAGTGCTACACATCCTTAGACAGGAGgctgAAAAAGGACCTGAAGGGTCTGCTGGTTGTCCATCCGGCGTGGTACATCAAAGCTCTGCTCACCCTGGTCAAACCCTTCATCAgtGAGAAGTTCAGCAGGAAGATTCAGTTCGTCCAGACTCTGCAGGAGTTGTCTCAGTTTGTTCCCACAGAAAGACTACAGATCCCAGACGCCATACGCCAgtttgATGAGAAGTTGAGCAGATGACATCCCAGACAGGACTGATCCTAAAGATCTAACCCCTGAGTTACCGTGGGCTCCTGGTAACCCAGACACACGCCTTCATATAAAGACTTTCttcatttcatattaatgtgttgttttttttgttgagtttgtcgcgtttttttcgacattttgtGTTCcatttttacaacttttttctctcttttttttgggacatttttgtttttgggaagtgtacataatattaaataatatgataataaaataatttgattCTGGAGGTTTGTTCTTCATcagaaaacactcaaaatgttACAAACTAGAACTTTTTCGACACTATTATCAACTttttggtggtttttttttctcacttttgtcTCTTTTGAACTAAatttaacctgtctgtctgtctctctgcctgtcttcctgtctgtctgtctgtctctctgcctgtctgtctgtct

Function


NR:

description
PREDICTED: bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein isoform X2

GO: NA

KEGG:

id description
K18448 BNIP2; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039806212.1 True 1349 mRNA 0.52 9 41399810 41409787

Neighbor


gene id symbol gene type direction distance location
LOC120562403 NA coding downstream 511056 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 583255 40811235 ~ 40816555 (-)
pmvk pmvk coding downstream 912464 40480066 ~ 40487346 (-)
tmem79b NA coding downstream 1035626 40354634 ~ 40364184 (-)
LOC120562375 NA coding downstream 1147656 40245385 ~ 40252154 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding upstream 205122 41614909 ~ 41660714 (-)
selenbp1 selenbp1 coding upstream 594065 42003852 ~ 42047544 (-)
LOC120562508 NA coding upstream 642188 42051975 ~ 42057548 (-)
LOC120562764 NA coding upstream 1210116 42619903 ~ 42623838 (-)
LOC120562512 NA coding upstream 1239662 42649449 ~ 42656684 (-)
G80558 NA non-coding downstream 36000 41362165 ~ 41363810 (-)
G80508 NA non-coding downstream 145593 41186453 ~ 41254217 (-)
LOC120562413 NA non-coding downstream 189164 41209030 ~ 41210646 (-)
G80526 LOC108281047 non-coding downstream 197579 41201771 ~ 41202231 (-)
G80512 NA non-coding downstream 213580 41157964 ~ 41186230 (-)
G80568 NA non-coding upstream 2680 41412467 ~ 41456358 (-)
G80572 NA non-coding upstream 11490 41421277 ~ 41502269 (-)
G80580 NA non-coding upstream 82267 41492054 ~ 41492753 (-)
G80603 NA non-coding upstream 201194 41610981 ~ 41611190 (-)
G80578 NA non-coding upstream 252730 41662517 ~ 41666764 (-)
G80498 NA other downstream 295716 41103243 ~ 41104094 (-)
G80488 NA other downstream 382618 41015850 ~ 41017192 (-)
LOC120562415 NA other downstream 634343 40678343 ~ 40765467 (-)
G80186 NA other downstream 902214 40492323 ~ 40497596 (-)
G80129 NA other downstream 1092287 40222367 ~ 40307523 (-)
LOC120562506 NA other upstream 3166 41412953 ~ 41421025 (-)
LOC120562392 LOC103132156,LOC108243373 other upstream 23254 41433041 ~ 41605388 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other upstream 228350 41638137 ~ 41998854 (-)
G80637 NA other upstream 690402 42100189 ~ 42108573 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other upstream 701193 42110980 ~ 42453873 (-)

Expression



Co-expression Network