LOC120562508


Basic Information

Item Value
gene id LOC120562508
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42051975 ~ 42057548 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806215.1
ATGTTGCCGGGCGGCTTCTTGGGCGGCAGCTGGCCTGGAGAGAAGATGCCGGGCGCCCGGCCGGGAGTTCATCGCGGGCTGGAAGGCGGCGCCGAGAGTCTGCTGGTGGAGGAGGCGTTGGAGCTGTGGACCAACAGAGTCTGGCTGAGCCACGTCAACGCTGCTGCTCGGCGCCACAagGCGCTGACGCGTCTGGAGAAGCTGCCGCACGTCTGGAAGACCTCCTTCCATCTGACGGGGGTTCTGTCGAGGACTCTGACGGAGACGCTGCTCGGCGCCGATGCTTATGGCGCCGAGTCTCCAGAACTCCTGGAGCTGGAAGacgaagaggagacagaggaggaggaagaagaagaagaagaaggaggaggaggaggaggaggaggaggagaagaggagacaaaagaggacagagaagagaaggagatggaagaggaagggaaggaaacAACGGAGGACACGATGAAAGACAGcgaggaggcggaggaggaggAAACAACAACCGCAGGAGAGGGAAAGGACACAATCCAAAGTGTGGAAGACAGcaaggagacagaggaggtagGGAAGGAAACGACGACAACAAAAGAAGGAAAGGACGCAATCAAAGACGGcaaggagacagaggaggtagGGAAGGAAACGACGACAACAAAAGAAGGAAAGGACGCAATCAAAGACGacaaggagacagaggaggaaaggGAGGAGACGAGAACAACAAAAGAAGGAAAGGACGCAATCAGAGACTGcaaggagacagaggaggtagGGAAGGAAACGACGACAACAAAAGAAGGAAAGGACGCAATCAAAGACGacaaggagacagaggaggtagGAAAGGAAACGACGACAACAAAAGAAGGAAAGGACGGAATCAAAGACGacaaggagacagaggaggaggctcggccggagaaagaggaaagggaCGAAGCTCTGGGAGACGAGAAGGAGACGAGAGAGGACGCTAAGACGCTGGAGGAAGACAGcgaggaggaaggaaaggagacgGAGGAGGACAGGAGGGAAGGGAGCAAGGAGAGACGGGAGACGAGGATAGTGATCGGAGAGGAGGTGGGCGATGAGTGGAAGATAACGGTGAAGAGCCGCGGCGCCGAGGGAGACGAAGACGAAGAGGACCTCTAGACGTCTTTTTCGACCCGTTCGTTGCTTTTCCGACCAATGTGTTTGTCTGCACCTTTTGACGTTTTGCACccccatgtttttttaatttgatgttttttaagATTTGATTTTGGGGGGGTTGCATTTTAGGCCTCTAACAGCTCGGACGATGGCGCTTTGCCGCCACAGGAAACAGAGATGGAGGCTTTTCCGACCTGAGCCCTTGTGGGACCGTTGTGTGTTTGGATGTGGATTTAAACACCCCCCCTGCCTTTTGAAGGCAGGTTTCAacatcacacagacttttcacccttgtgttgacttcgggtcaaattgaccagttttaaattttagttttacagtacaggccaaaagtttggacacaccttctca

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806215.1 True 1524 mRNA 0.54 4 42051975 42057548

Neighbor

gene id symbol gene type direction distance location
selenbp1 selenbp1 coding downstream 4431 42003852 ~ 42047544 (-)
myo1eb LOC104937078,LOC101474664,LOC102208361,LOC100691416,LOC102308324 coding downstream 391261 41614909 ~ 41660714 (-)
LOC120562505 LOC100690881,LOC102207812,LOC101474950 coding downstream 642188 41399810 ~ 41409787 (-)
LOC120562403 NA coding downstream 1163221 40884121 ~ 40888754 (-)
LOC120562399 NA coding downstream 1235420 40811235 ~ 40816555 (-)
LOC120562764 NA coding upstream 562355 42619903 ~ 42623838 (-)
LOC120562512 NA coding upstream 591901 42649449 ~ 42656684 (-)
G80629 NA non-coding downstream 74392 41927260 ~ 41977583 (-)
G80630 NA non-coding downstream 74870 41944527 ~ 41977105 (-)
G80626 NA non-coding downstream 166683 41884565 ~ 41885292 (-)
G80620 NA non-coding downstream 203329 41848344 ~ 41848646 (-)
G80607 NA non-coding downstream 380008 41670887 ~ 41671967 (-)
G80638 NA non-coding upstream 3612 42061160 ~ 42061828 (-)
G80639 NA non-coding upstream 22013 42079561 ~ 42081822 (-)
G80641 NA non-coding upstream 26284 42083832 ~ 42084336 (-)
G80656 NA non-coding upstream 235457 42293005 ~ 42303897 (-)
LOC120561594 NA non-coding upstream 294105 42351653 ~ 42352362 (-)
LOC120562507 LOC105890369,LOC107379007,LOC105018870,LOC105012700,LOC103477466,LOC103369594 other downstream 53121 41638137 ~ 41998854 (-)
LOC120562392 LOC103132156,LOC108243373 other downstream 446587 41433041 ~ 41605388 (-)
LOC120562506 NA other downstream 630950 41412953 ~ 41421025 (-)
G80498 NA other downstream 947881 41103243 ~ 41104094 (-)
G80488 NA other downstream 1034783 41015850 ~ 41017192 (-)
G80637 NA other upstream 42641 42100189 ~ 42108573 (-)
LOC120562509 c3-2,LOC102208541,LOC102799596,LOC100692186 other upstream 53432 42110980 ~ 42453873 (-)
LOC120562510 NA other upstream 316570 42374118 ~ 42387280 (-)
G80778 NA other upstream 618393 42675941 ~ 42770763 (-)
LOC120562513 LOC105920527,LOC103477479,LOC103369598,LOC106909307 other upstream 848986 42906534 ~ 42955865 (-)

Expression


Co-expression Network