rhbg (rhbg2a,LOC106605319)


Basic Information

Item Value
gene id rhbg
gene name rhbg2a,LOC106605319
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 34914321 ~ 34932785 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806234.1
GTCCAATTAGGCCAACTCCCCTATAAAGCAGCTCTTTCTCCTTCTGCCACCGTTTTGCTCAACCAACTTTGGAACCCTCTCTAACCACGGACCCTCAAAATGGTCGAGCCTCAGCCAGCCTCTCCTCGTCTCAACGGGGAGGAAGACATGACGGGCGCAGAGACCAACATGCGGCTGAAGCTGCCGATCATCTGCTTCATCCTGGAGATCATCCTCATCATCCTGTTCGGTGTTCTGGTGCAGTACGATTACGAGGTGGACGCCAGGGAGTGGCACAACAAGCTCAACCCTGGGAACAAGAGCCACTCTGAGCACAATGGCCATCCCGAGTCCAACAGCCACTCCGAGTCCAAGGTCCACTCCAACTATGACAACGACTTCTACTACCGCTACCCAAGTTTCCAGGATGTGCACGTGATGATCTTCATCGGTTTTGGCTTCCTCATGACCTTCCTGCAGCGCTACGGCTTCAGCAGCGTAGGCTTCAACTTCCTGATCGCAGCCTTCTCTCTGCAGTGGGCTACGCTCATGCAGGGCTTCTTCCATGGAATGCATGGAGGCAAGATCCACATCGGGGTGGAGAGTATGATTAATGCTGATTTCTGCACCGGCGCTGTGCTCATCTCATTTGGAGCTGTTTTGGGGAAAACCAGCCCTGTCCAGCTGCTGGTCATGGCGATATTTGAGGTTACACTGTTTTCAGTCAACGAGTTCATCCTGCTGACCGTTCTGGGGGCCAAGGATGCCGGAGGCTCCATGACCATCCACACGTTTGGAGCCTACTTTGGCCTTATGGTGACCCGAATCCTTTACCGGCCCAACCTGGATAAGAGTAAACACAAAAACTGCTCAGTCTACCATTCTGACCTGTTCGCTATGATCGGTACCATCTACCTGTGGATGTTCTGGCCCAGCTTTAACTCTGCCGTCACGGCTCATGGAGACGACCAGCACCGCACAGCCCTGAACACCTACTACTCCCTGGCAGCCTGCACTCTGTCCACATACGGCATGTCCGCCCTCACAGCACACGACGGCAAGCTGGACATGGTCCACATCCAAAATGCTGCCCTGGCCGGCGGAGTCGCAGCAGGAACAGCTGGTGAAATGATGCTGACGCCGGTCGGCTCCATGATCGTTGGTTTCTTGGCCGGCATCATCTCTGTTCTGGGCTACAAGTACCTCTCACCCATCCTGGAGGAAAAACTCAAGGTCCAAGACACCTGCGGGGTTCACAACCTGCACGGCATGCCCGGCGTCCTGGGCGCTATTGTGGGAGCGGTGACTGCAGCCGTGGCAACTACTGACATTTATGGAAAGGGTATGGAAGACGTGTTCCCGGATGTGGCAAAAGGAAACATCACAGCGTCTTACCAGGGTGTCCGTCAGGCCATTTCCCTCGCTGTCACCCTTGGCATGGCCCTGGTGGGAGGGCTTATCGTCGGTTTCCTTTTGAAGCTTCCCATCTACGGAGCTCCTCCTGACACAATCTGCTTTGAGGACAACATCTACTGGGAGGTGCCTGGGGACGAGGAGGAGGACCATCAGGATAAGGCCACTGTGAGGATGACGGAGACTGAGAGGCTCAACGCTTAGACGCACACATAgtatcttacacacacacagacagtatgtTACACAGACAgtatgttacacacacacagtatgttacacacagacagtatcttacacacacgcacatgcaggTCAGGGTGACGGGGATGTTGATgaatttgcttgttttgtttcactcagtgtgtgtgtgtgcgtgtgtgtacacacacacacacacacactcactctgagGTTTTAACATCCTAGCACtcgtttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>XM_039806235.1
ACCGAGGACATcccgggGTCGAGCCTCAGCCAGCCTCTCCTCGTCTCAACGGGGAGGAAGACATGACGGGCGCAGAGACCAACATGCGGCTGAAGCTGCCGATCATCTGCTTCATCCTGGAGATCATCCTCATCATCCTGTTCGGTGTTCTGGTGCAGTACGATTACGAGGTGGACGCCAGGGAGTGGCACAACAAGCTCAACCCTGGGAACAAGAGCCACTCTGAGCACAATGGCCATCCCGAGTCCAACAGCCACTCCGAGTCCAAGGTCCACTCCAACTATGACAACGACTTCTACTACCGCTACCCAAGTTTCCAGGATGTGCACGTGATGATCTTCATCGGTTTTGGCTTCCTCATGACCTTCCTGCAGCGCTACGGCTTCAGCAGCGTAGGCTTCAACTTCCTGATCGCAGCCTTCTCTCTGCAGTGGGCTACGCTCATGCAGGGCTTCTTCCATGGAATGCATGGAGGCAAGATCCACATCGGGGTGGAGAGTATGATTAATGCTGATTTCTGCACCGGCGCTGTGCTCATCTCATTTGGAGCTGTTTTGGGGAAAACCAGCCCTGTCCAGCTGCTGGTCATGGCGATATTTGAGGTTACACTGTTTTCAGTCAACGAGTTCATCCTGCTGACCGTTCTGGGGGCCAAGGATGCCGGAGGCTCCATGACCATCCACACGTTTGGAGCCTACTTTGGCCTTATGGTGACCCGAATCCTTTACCGGCCCAACCTGGATAAGAGTAAACACAAAAACTGCTCAGTCTACCATTCTGACCTGTTCGCTATGATCGGTACCATCTACCTGTGGATGTTCTGGCCCAGCTTTAACTCTGCCGTCACGGCTCATGGAGACGACCAGCACCGCACAGCCCTGAACACCTACTACTCCCTGGCAGCCTGCACTCTGTCCACATACGGCATGTCCGCCCTCACAGCACACGACGGCAAGCTGGACATGGTCCACATCCAAAATGCTGCCCTGGCCGGCGGAGTCGCAGCAGGAACAGCTGGTGAAATGATGCTGACGCCGGTCGGCTCCATGATCGTTGGTTTCTTGGCCGGCATCATCTCTGTTCTGGGCTACAAGTACCTCTCACCCATCCTGGAGGAAAAACTCAAGGTCCAAGACACCTGCGGGGTTCACAACCTGCACGGCATGCCCGGCGTCCTGGGCGCTATTGTGGGAGCGGTGACTGCAGCCGTGGCAACTACTGACATTTATGGAAAGGGTATGGAAGACGTGTTCCCGGATGTGGCAAAAGGAAACATCACAGCGTCTTACCAGGGTGTCCGTCAGGCCATTTCCCTCGCTGTCACCCTTGGCATGGCCCTGGTGGGAGGGCTTATCGTCGGTTTCCTTTTGAAGCTTCCCATCTACGGAGCTCCTCCTGACACAATCTGCTTTGAGGACAACATCTACTGGGAGGTGCCTGGGGACGAGGAGGAGGACCATCAGGATAAGGCCACTGTGAGGATGACGGAGACTGAGAGGCTCAACGCTTAGACGCACACATAgtatcttacacacacacagacagtatgtTACACAGACAgtatgttacacacacacagtatgttacacacagacagtatcttacacacacgcacatgcaggTCAGGGTGACGGGGATGTTGATgaatttgcttgttttgtttcactcagtgtgtgtgtgtgcgtgtgtgtacacacacacacacacacactcactctgagGTTTTAACATCCTAGCACtcgtttgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: ammonium transporter Rh type B isoform X1

GO:

id name namespace
GO:0072488 ammonium transmembrane transport biological_process
GO:0015695 organic cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG:

id description
K06580 SLC42A, RHAG, RHBG, RHCG, CD241; ammonium transporter Rh

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806234.1 True 1865 mRNA 0.53 11 34914321 34932785
XM_039806235.1 False 1780 mRNA 0.53 11 34914321 34931719

Neighbor

gene id symbol gene type direction distance location
LOC120562852 NA coding downstream 104472 34807830 ~ 34809849 (-)
mef2d mef2d,LOC103369254,LOC103388711 coding downstream 135716 34634741 ~ 34778605 (-)
LOC120561738 NA coding downstream 314282 34585627 ~ 34600039 (-)
LOC120561740 NA coding downstream 384268 34517477 ~ 34530053 (-)
LOC120561750 NA coding downstream 428559 34482786 ~ 34485762 (-)
isg20l2 isg20l2 coding upstream 101098 35033883 ~ 35043980 (-)
LOC120563201 NA coding upstream 140173 35072958 ~ 35088429 (-)
sri sri,LOC102777834,LOC101483957 coding upstream 170191 35102976 ~ 35110676 (-)
trnap-agg_6 NA coding upstream 200879 35133664 ~ 35133735 (-)
trnap-ugg_1 NA coding upstream 202206 35134991 ~ 35135062 (-)
G78406 NA non-coding downstream 3748 34910358 ~ 34910573 (-)
LOC120562743 NA non-coding downstream 26075 34869387 ~ 34888246 (-)
G78389 NA non-coding downstream 63891 34844289 ~ 34850430 (-)
LOC120561760 NA non-coding downstream 354774 34558496 ~ 34559547 (-)
LOC120561769 NA non-coding downstream 419562 34493956 ~ 34494759 (-)
G78446 NA non-coding upstream 94593 35027378 ~ 35027581 (-)
G78448 NA non-coding upstream 97857 35030642 ~ 35030846 (-)
G78450 rrnad1,LOC102779171 non-coding upstream 114142 35046927 ~ 35047141 (-)
G78451 rrnad1 non-coding upstream 120501 35053286 ~ 35054192 (-)
G78452 NA non-coding upstream 125183 35057968 ~ 35058870 (-)
G78321 NA other downstream 421126 34492346 ~ 34493195 (-)
LOC120561748 NA other downstream 573340 34339177 ~ 34340981 (-)
LOC120561737 NA other downstream 591306 34316812 ~ 34323015 (-)
LOC120561747 NA other downstream 640669 34261526 ~ 34273652 (-)
LOC120561744 NA other downstream 781889 34129538 ~ 34132432 (-)
bcan NA other upstream 42039 34974824 ~ 35004333 (-)
G78444 NA other upstream 79318 35012103 ~ 35014522 (-)
G78496 NA other upstream 241081 35173866 ~ 35177239 (-)
plekhf2 plekhf2 other upstream 335572 35268357 ~ 35309397 (-)
G78733 LOC104935873 other upstream 1091946 36024731 ~ 36026542 (-)

Expression


Co-expression Network