gabbr1a (gabbr1,LOC103356805)


Basic Information

Item Value
gene id gabbr1a
gene name gabbr1,LOC103356805
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 29019647 ~ 29082136 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806244.1
TTGTGGGCCCAGACCTTAGCGCGTTTCATCTTGGGGTAGGAGGGAGATAAATGCGTGACAGAGGGACTGTTACGCACGGTGCGTCTCCATCATGACGTCGTGAATTAGCTCAAGATTGtagggggagagaaaaaaaggaggggAGTGTGGTGAAACGGTGTTTCGTCGTGTATGGGTATACGTTTGTATATAGTgcatgtatattttttgtatggATTTTGACATTTATTACCTTTGCCATGCGTAACTGCAATACATAGAAAAACGCCGAATAAgataggttttgtttttgtaacattCTGTTTACGAACGGAGCAGATTGCACATTTATAGCCATATTAATATAGCCATAAAATCGTTTTAAGATGAATATTTTTACCAAATAACCCGACATTGGGCTTTCCCTGGCGGATCCACCCCGGAGGACGTACTGCTATCCTGACTGAGCGCATCGAAACTAATAATCCAGAGATGGCACAACTATTCTTTCTGATTATTCTCTATGCTCTTCCATCTCTCGTTGCGCCCATACATAATTCATCAAGTGGAGgCTGCGCTATCATCCGGCCTCCCAGGGATGGGGGGATCCGCTACAGAGGCCTGACACAAGAACAGATCCGCAGTGTGCAGATCCTCCCTGTGGATTATGAGATAGAGTACATCTGCAGAGGAAACCGAGTGATCGTGGGACCCAAGGTCAGGAAGTGCTTACCCAACGGCACATGGACGGACATGACGCTGCACAGCACATGTTTGCTGCTGTGCCCGCGGGTGTGGACCTCCCTGGAGAATGGCCGGGTGATGGTAAAGCCCCCCGGGCCACCAGTGGAGGGGACAGTGCTCCATTACAGCTGCCATGCCGGCTTCATCCTGGAGGGCAGAAACATCAGCCATTGCACTAAACTGGGCAAGTGGGACGCGCCTAAACCCACCTGCCTCTAtgacagaaactacacagGCAAGAAGAAGCTGTACATCGGAGCGCTGTTCCCCATGAGCGGTGGCTGGCCCGGTGGTCAGGCGTGTATGCCCTCCGCCCAGATGGCCCTGGACCTGGTAAACAACAGGAGCGACATCCTGCCCGACTACGAACTGGAGCTCATCCACTACGACAGCATGTGTGACCCAGGAGAAGCCACCAAGTTGCTGTATGACCTTCTGTACACCGAGCCCATCAAGATCGTGCTGATGCCCGGCTGCAGCGGCGTCTCCACGTTGGTGGCCGAAGCTGCTCGCATGTGGAACCTCATAGTGCTGTCCTATGGCTCCAGCTCGCCGGCCCTGTCCAACCGCCAGCGCTTCCCCACCTTCTTCCGCACGCACCCGTCGGCCACCCTTCACAACCCCACCAGGGTGCAGCTCTTCCAGAAGTGGAAGTGGACCCGCATCGCCACCATCCAGCAGACTACTGAAGTCTTCACCTCAACTCTGGACGATCTGGAACAAAGGACGAAAGAGGCAGGCATTGAGATCAGCGTTCGCCAGAGTTTCCTCACCGACCCGGCTGTCGCTGTCAAGAACCTCAAGCGCCAAGATGCAAGGATCATTGTGGGGCTCTTTTATGAGACTGAAGCCAGGAAGGTGTTTTGTGAGGTGTTCAAGGAGAAGCTCTACGGGAAGAAGTATGTGTGGTTTCTTATAGGCTGGTACGCAGACAACTGGTTCAAGATCAAAGACCCAGCTATCAACTGTACAGTGGAGAACATGACGGAGGCCGTGGAAGGACACGTGACCACCGAGATCGTCATGCTGAATCCTGAGACGGTCCGCGGCGTCTCCAACATGACATCGCAGGAGTTTATTGCCGCCTTGATGTCTCGTCTGGGTGGGAAGAACCCTGAGGAGACCGGTGGGTTTCAGGAGGCCCCTCTTGCCTACGATGCAGTGTGGGCTCTGGCCCTTGCTCTCAATAAGACCGTGGCACCACTTAAGGCAAAGGGCCGACGACTGGAGGACTTCAACTACAACAACCACGACATCACCTCTGAGATCTACAGGGCCCTCAACACAAGCTCCTTTGAAGGTGTTTCGGGCCAAGTGGTGTTTGACGCCCAGGGTTCTAGGATGGCAATGACTCTTATCGAGCAACTGCAAGGAGGCAGTTACAAGAAGATCGGTTACTATGACAGCTCTCAGAAGAACCTCTCCTGGTTTGGCAATGATGTTTGGATAGGTGCTGGACCTCCGGCTGATCGGACAGTGGTGATCGAAGAGTACAGGTTCTTGTCTCAGAAGCTGTTTGCTGCTGTGTCCGTCTTCGCTGGCCTCGGCATCCTGTTTGGCATTGTCTGTCTAACCTTCAACATCTACAATGGCAACGTCCGCTACATCCAGAACTCTCAGCCATACTTGAACAACATGACAGCGGTGGGCTGCATGATGGCTCTGGCCGCAGTGTTTCCGCTGGGGATTGATGGTCACCACGTCCACAGATCTCAGTTCCCCGTCGTCTGCCAGttcCGCCTGTGGCTCCTGGGCCTCGGCTTCAGCCTGGCGTATGGCAGCATGTTCACCAAGATCTGGTGGGTCCACACACTCTTCACAAAGAAGGAcgaaaagaaggagaagaagaagCAACACTTGGAGCCATGGAAACTCTACGCAACAGTTGGAGTGCTGCTGGCTATCGACTTCCTGTCACTCATGATCTGGCAGATTGTGGATCCTCTGCACATTACGGTGGAGAAGTTCACTAAGGAAGCCCCTAAAGAAGATTTGGATGTCCTGATTCAGCCCTTGCTGGAGCACTGCAGCTCAGAGAAGATGAACACGTGGCTCGGTGTGGTTTATGGCTACAAGGGTCTCTTGCTACTGCTGGGAATATTTCTGGCTTACGAGACCAAGTCTGTCTCCACAGAAAAGATCAATGACCATCGGGCCGTGGGATGGCGCTATACATTACATAACATGGCGGTGTTGTGTCTGATCACGGCTCCAGTGACCATGATCCTGTCTTCGCAGCAGGATGCCTCCTTTGCCTTTGCCGCTCTAGCAGCCGTCTTCTCTGCCTACATCACTCTGGTCGTGCTTTTCGTACCCAAGATGCGGCGTCTCATCACCCGCGGTGAGTGGCAGTCGGAGCAGCAGGACACTCTGAAGACCGGCTCGTCCACCAACAACAACGACGAGGAGAAATCCCGGCagctggagagagagaacagggaGCTGCAAAAGATCATCCAGGAGAAAGAGGAGAGGGTATCGGCACTCCGCAACCAGCTGGCTGAGCGACAGGCTCTACGCAACCGCCGCCGACCCTCCTCAGGCCAGAATCAGAACCACAACACCCCGCCGCCCTCCTCCCAGCCGGATCCCAAGTCTCTGCTTCCCCCGCCCGGCTACCCCAACCCCACCACGGACAATCACGCCCTCCCGCCTTCCTTCTCCAACTCCTCCAACCTCTACCCGGCTGACAGCAAGATGAGCCGCAACCATTGTCACAACAGCCAGATCCCATTGCTGTATAAATAGGCGAGGCACTGGGAGAGGGGGaagggtgggtggggggtgggaacACTCGCAGAATGCACACAAACCGGGGACACACAAATCACAATGAGACACTGTGACTTTCACTTGTTTCGGCGATAAGCACAGCGGTGTTGTGACACTGTTTTAAAATATGGCGTGGAAGCACAAATAAGTACACAGGAGTGCTTTGCACTTGGCAGCTTCTGGGAGAGTCACGCAGGTAACACCCGTCCTCACAGTTTTGATCACACTGTGTTCAACCCAGCAACGAGGCACTTGTGACTGGTCAGACTAGCAGCACTCGAGGTCTTTTAAAAAGGTCAAGTGAACAGATAGCTCTCTTAATCATTCCTCTCCCTCATTTGTTATCTCGTTCTGTTGTGGAGGCACCGCATCAAGGATCTTAAAAGGAAACGTTTGTGCTTGTGTCTTTGCTATATCGTCTCCACCTTTTGTCTCTCGAGTTTGTTGACAATGTAGGCAAGCGCATACAGTAGTGATTTATATTGTTCTGTAATATCTGATATGTTTTGTCATGGAGTTGTGAattatttgtttactttttttttcaggagaGTTGTGAAAGCTGAAATGTACAAAGGGACAAAGCGATGTAAAGTTGTTTCCAATGTTTCCTCTAAAGAGATCGACTGTGTGGAACACTCGTTTCACTGAAAAGTGATAATGTGCATTAATAAATAGCCATAATTTAGAAGGGCCTTGGCATGTATGGATGTGTCTTGTCAGGACTGTGTATTCAAGTACAACACTGGATCTTGAAAATCCAGTCCTTTGCTGAATATTAGACCCATTTTAAAGGAGAAAATGATCAGAGTTTGCTCGTGTATAGGGACATTTTTGATAGTTTTGccatttaaaataatgtttcacaATGTATTTTTTGAGATTTGTGTTGTATCTATTTAGCTGTATAGTACAGTAGTAGCCATCAAATAAACCCCTCATCCTGCATCTTATGTATTTTGCAGATATCGCCAAATACTGCTGCAGCCATAGTAACTGCAGCTGATTCTCACTTTTAGAGAAAACTCCAACTTACAACTTGCCAGAAAAATAGTTTGTACTTTCTGCCTCCTGGAAATGAAAGCCAATGTATATTTCTACAGCAGCAGTGCGGTGAGATGTGGGGCTTCCACGATGGCAATTTCTGTAAATATTCAGAGAAAGCACAGTTTTTATACATGTGAATCTGTTATACGTCATTCTTGTaagccttttattttttattttgaaaggatgTTTTCTCTTATGTTTTCCCATAACAGACAATCTGGATGGATGctaatttttttctatttttctttcccATTTTGCCTTTTGGGTAAATTGTAAATGTATCAAAGAATGATATACGTAAAGTAAtgtgacatactgtatttattcAGCAGTTAATCTGGATGTACTATTTCATTCATGAGCTATTTCCAGATTTTATAAAGCAATGATACCTGAATGGCTTTATCAGCAGGTAAAACAATATTTATGTCAAATATTTTGTTAGTGTGCACTTTAAACTGAACGAACTATGGTTATTCCACTTTATGTTGCGGTTATCCTAATACAATTTAGCTCAGGGTATGGAGGAGGACATCAATGAATGAAATAGGCCATATTTATTAACTGTGCAGTACCTGGATCAGATATTGTAACATATGAATGCGGAAATAATTTAGGAAATGTTCTATTATCTTGCACATATATGACATTATACATGGATTTGTGGATATTTGTATTCACTATATCTAAAATcttaaatgttaatatatttCAGAGTATGTGTATGCAAATATATGGGtaccataaataaaaataattgttttttca

Function

symbol description
gabbr1 Contributes to G protein-coupled GABA receptor activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway and gamma-aminobutyric acid signaling pathway. Is integral component of plasma membrane. Part of G protein-coupled receptor heterodimeric complex.

NR:

description
PREDICTED: gamma-aminobutyric acid type B receptor subunit 1

GO: NA

KEGG:

id description
K04615 GABBR; gamma-aminobutyric acid type B receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806244.1 True 5316 mRNA 0.48 24 29019647 29082136

Neighbor

gene id symbol gene type direction distance location
sh3bp5la LOC104964842,LOC103356806 coding upstream 513 29008573 ~ 29019134 (+)
mgat1a mgat1,LOC104964845 coding upstream 11815 29004625 ~ 29007832 (+)
LOC120563046 NA coding upstream 14837 29002636 ~ 29004810 (+)
rnf183 NA coding upstream 18980 28998228 ~ 29000667 (+)
dhx16 dhx16 coding upstream 22213 28981531 ~ 28997434 (+)
bag6 bag6,LOC104960485 coding downstream 48173 29130309 ~ 29146625 (+)
LOC120561976 NA coding downstream 75533 29157669 ~ 29162290 (+)
LOC120562725 NA coding downstream 81425 29163561 ~ 29168931 (+)
LOC120562877 LOC103362365,LOC104932167,LOC104967986 coding downstream 255320 29337456 ~ 29338974 (+)
LOC120562836 NA coding downstream 257118 29339254 ~ 29348823 (+)
LOC120563088 NA non-coding upstream 68123 28943905 ~ 28951524 (+)
G76885 NA non-coding upstream 76921 28941062 ~ 28942726 (+)
G76887 NA non-coding upstream 79292 28939209 ~ 28940355 (+)
G76859 NA non-coding upstream 138459 28880973 ~ 28881188 (+)
LOC120562350 NA non-coding upstream 177377 28836396 ~ 28842270 (+)
G76969 NA non-coding downstream 44819 29126955 ~ 29127212 (+)
G76995 NA non-coding downstream 214822 29296958 ~ 29302135 (+)
G77004 NA non-coding downstream 231963 29314099 ~ 29314625 (+)
G77014 NA non-coding downstream 281097 29363233 ~ 29365430 (+)
LOC120562102 NA non-coding downstream 331123 29413259 ~ 29424203 (+)
LOC120562342 NA other upstream 184279 28800650 ~ 28835368 (+)
G76714 NA other upstream 449781 28553572 ~ 28569866 (+)
G76707 NA other upstream 498025 28520699 ~ 28521622 (+)
LOC120562434 NA other upstream 602892 28414518 ~ 28416755 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other upstream 603994 28388097 ~ 28415653 (+)
pear1 LOC104932170 other downstream 97694 29179830 ~ 29244092 (+)
mex3a mex3a other downstream 194011 29276147 ~ 29288548 (+)
G77009 ubqln4 other downstream 246653 29328789 ~ 29330258 (+)
LOC120562177 LOC104942602,LOC104934039,LOC103362363 other downstream 301999 29384135 ~ 29390053 (+)
G77028 LOC104942601 other downstream 321872 29404008 ~ 29412413 (+)

Expression


Co-expression Network