gsdmeb


Basic Information

Item Value
gene id gsdmeb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19978757 ~ 19988747 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806251.1
GCGGAGCGTCCGCGCGTCTTTTGTCCAAAACAAGATCCACTTCACTAACACATAACCGATGCATGGGGAAGCCTTGTCTGCTCTAGAAGTCTGGCCGCAAAGAGCGTTTCTCGTCTGGTTCATCACTGAAACAAGGACTTCGGCCTCGCAGGTTTAAGGGATGTTTGCCACAGCCACCAGAAACTTCGTGGAGGAGGTGGATAACGGGGGGTTGCTGATTCCAGTGTCCAGTCTGAATGACACCATTGCTCTTCTGACAGTGGTGGTGAAGCGCAAGCGTTTCTGGGTCTGGCAGAAGCCCAAGTATATTCCCTCTGATTTTAACCTCAATGATATACTAACAGGAGACATACCTATACAACCAGGTGTCATAGAGACAGACTTCATTAAATACAATGGGACATTTGGTGACAACATCCAAGGGACCGTGGACGCAAAGTTTGCCCATGCCAATGTGAGCCTCGAGGGTAAAGACTCTTCCAAACTCCAGTCATCCTTTGGCAGTTTGAAGAAGGACGAAGTGGATGTGCAGAAGCTGCTGCTAGACTCCAAAGGCAGGGTCCTGGACATGTCCCATGGTCTCATCCAGCACAAGGAGAAGCCCAGACAGGTGTTTGGGGTTGTGAAGGAGCGTATTGTGACTACTCAGCCCTGTTCGGTCATAGAGGAGGTGCAGCAGGGAGGACAGTATGCAGGAGTACTGAGCCTCTGCGGGCCCAAGAGCTCAAagGTTTCATTGAAAGAGAATGGCAGCTTGAGTAAGGACAGTAACATCACCATGGAGATTCCCATCCATACTACCATTGCCTATGGTCTTTTAGAGCTAGAGATCAAACAAGATGGGCGCTTTGAGCTGTGTCTGATGGCAGACACCACTGGAGGTTTTGAAGTCGATGGCCTTGCTAAGAAAGGATTGTTGGGTGTCTCTGAAAAAACCTACCTTAGACAAGAGCTGGAGCAACTGAGCGATCATTTCCAGCTGCTTTCAGCTCTTCCTGCCACCACAAGGTCCTTTCTGCTCCAGCAAATCACCAAAGTTATGGAGGACCGAGGGGCCGTCAGTTCACTTCAGAATGCGCTGGACCAGATGTGCCTGGATAAGAGACTTGCCCTGGGTGATGTCACAACGACAGAGCCCCAAAAACAGAACATCCGAACAATTCTGGACCTTTTGGAGCAGTCTGGTCAGGTTGAGTCCACACCAGTCCTTACAGCCCTTAACCTTGTTACCAGCGCAATGGATGAGATGACAAATGATTGTCTTTCTGTCTTGGGAATGTGCTGCAGCCTCACAGTGTTACAGGCTCTGGAGCTACTGGTGCAGTGTGTATCCGGCAAGGGGGAGTTGCATCTGAGCAGCGCAGGCCTAGCTGCACTGACAGAAGACGTCTTTGAAAAGACTGAACATCTATTTGCCTCCTCTAATGTGTCCCTGAAGAGAGACGGGGACACAGTGAAGACAGAAATAAGCCACCTGGCAGGAAATCGCCCTCTGGTCCTGTGTATCGCTGTCAGAGGTCTCGCCTCGTTGGCCCACTGTGATTGAACTGAAGACACGTTTACAGTTTATCCACCAGAAACTTGAAACGTTACACTGGAATGAGGTAAAGGGGATCATATAGATTAcgttatttttgttatttgagtgtttttctctttttggtgCAGTGCACGTTCCTCTAAAAAAGTGTTGCGTTTCATTGTAGGATAATTATATAGATAAATGTACTGGTGTTAAAACAATTAGtgaattaatgctttttttcaatcgacgacaaaaaaaaatttacaataaaaaagttTAGGTCATGGtttgttggacaaaacaagcattttgAAGACGTCACCTCAGACTCTAGGAAAGTGTGAGGTGCAGTTTTTTACTGATTTTatctagaaaaaaaacaattgcttACAAATGTAAAATGATCCACTTTGAGATtataacttattattattaaggcAAAGTACCCTACAAGTTGTGCAttacttaaaggagaattcatGCCTTCAAGCCaatgaaaaataatcattagctgCAGCCCTGAAATATGCTGAATACACAATTGTGCACACTCTTTGATATAGaatttaaatctttaatttagCACCTGCTGGTAGGAACAGcattattatacacataaaCAATAGAGGGGTTAAATGATAGGAAGTCACCTGGTTCTTACCATCTTATTTTGGGTCATAGTCTCTGAAAGAagcatgtcttttttttgtcttgtgttctcatgtaattacattttaaatacagtaCGATTGTCTCATTTGCCAATGTTGTGAAAACTTAACTAAAACCTCtcacttttaaaataaacactAATGGATTTTTGTATGTAGGGGCTAATGTCATGTCTCAGCCATGGATCTGTAGGATAATAATCTTGTACTTTAACATTCTTTGTGGCTATATTTTGTCTGCAATAACATTTCAATGAGTTTCAATGTGCCTTTTTAATTGTGAAGCTTTATTTCAGGTTTTGACAATATTGGAAATTGTTTAAACTTGCTACCTTTTTATCTGTATCCTTGTATGTTTAtaagaaaaacatgtaaatattCTTTTCTCTTTGCAAACACATACTCAACACAACACGTTTGTCAAATAATTGTGCCAAAAGAGCAAAGTAAAACCAAAGTGGATCATTAGAAAACACCAGTTATTTACTTGACATctgaaaatacatatttatttgAATTCCTGTAAAATATACCATTTAATAAGTAAATATGAGCTTTATTTTAAACTGTTAAGTTTTAGTAATATCACATCTAAAGGGATCATTCTCTGAGATGCAATACCCTGTTCAAGAGTCCTATGGAAAGTTTTTCTTTCAAGCAAACACAAAGACAGCACCATCGCAGCGTGTCTAACAGTCTTAATTAGAAATAATGATGCCCGACAAACATAATTCATGTAATCTGTTGTGCTTAAGTGAAAGAGAAATAATGGCTAAACACTACAGAAATACTTTTTTCTTCTGTACAACATAAAACAGTGACTGGCATGACATTTTCTATGTATGAGATTAAACTGCAAAAACAGAGCATAAATGTCGCCTTGAGGAGGAAAAAGGTCTCAAAAATGACACTGTTCTACATGAATGTTTGTAGTCCCAAAATGAGATGAAGTACTGAAGGCATATGCACTGTAAACTGTAACACTGAGGTATCCTTTTCTTGCAGAATAAATACTTACATCTTACATACAGATGTAAAATTAAAACAG

Function

NR:

description
PREDICTED: non-syndromic hearing impairment protein 5 isoform X1

GO: NA

KEGG:

id description
K22146 DFNA5; non-syndromic hearing impairment protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806251.1 True 3244 mRNA 0.41 11 19978757 19988747

Neighbor

gene id symbol gene type direction distance location
osbpl3b osbpl3,LOC102198167 coding upstream 1763 19947456 ~ 19976994 (+)
LOC120561951 NA coding upstream 33582 19942987 ~ 19945175 (+)
skap2 NA coding upstream 86778 19881877 ~ 19891979 (+)
hoxa2b LOC100534423,LOC102306217,LOC102196176,LOC102792302 coding upstream 100089 19876877 ~ 19878668 (+)
hoxa9b hoxa9,LOC104927766,LOC104949899,LOC103364041 coding upstream 108019 19869180 ~ 19870738 (+)
si:ch211-269k10.4 NA coding downstream 100118 20088865 ~ 20093308 (+)
brd9 brd9 coding downstream 181869 20170616 ~ 20178125 (+)
zdhhc11 NA coding downstream 189837 20178584 ~ 20184495 (+)
nbeal2 nbeal2 coding downstream 252857 20241604 ~ 20275511 (+)
nradd LOC104940332,LOC103360043 coding downstream 289746 20278493 ~ 20287448 (+)
G73836 NA non-coding upstream 158166 19820235 ~ 19820591 (+)
G73776 hdac9 non-coding upstream 339298 19634873 ~ 19639459 (+)
LOC120562701 NA non-coding upstream 353146 19614503 ~ 19625611 (+)
LOC120562732 NA non-coding upstream 522141 19453769 ~ 19456616 (+)
G73606 NA non-coding upstream 658709 19319438 ~ 19320048 (+)
G73871 NA non-coding downstream 30362 20019109 ~ 20052006 (+)
G73881 NA non-coding downstream 52124 20040871 ~ 20046380 (+)
G74067 NA non-coding downstream 325737 20314484 ~ 20318117 (+)
G74081 NA non-coding downstream 351594 20340341 ~ 20340927 (+)
G74091 NA non-coding downstream 414076 20402823 ~ 20423897 (+)
G73779 hdac9 other upstream 329246 19646975 ~ 19649511 (+)
si:ch211-254p10.2 LOC102209663,LOC101158134,LOC102295699,LOC101064473 other upstream 525474 19447167 ~ 19453283 (+)
hcst LOC104925504,LOC104961397 other upstream 786655 19190020 ~ 19192102 (+)
G73570 LOC103371659 other upstream 819762 19148613 ~ 19158995 (+)
kmt2bb kmt2b other upstream 1116799 18833245 ~ 18861958 (+)
LOC120561838 tppp other downstream 203943 20192690 ~ 20209327 (+)
si:ch211-257p13.3 kifc3,LOC102783047 other downstream 225841 20214588 ~ 20226991 (+)
gra NA other downstream 333583 20322330 ~ 20325961 (+)
glipr2l glipr2 other downstream 611576 20600323 ~ 20605165 (+)
sec61b sec61b,LOC102796100 other downstream 1019266 21008013 ~ 21011414 (+)

Expression


Co-expression Network