LOC120562546


Basic Information

Item Value
gene id LOC120562546
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 28472676 ~ 28482599 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806280.1
TAGAGCTGAGTGTGCCACCCAGACAGGCCACCAGTCTGACATGATTCAGTTGCTGGATTATAACCACTGTGCCTTGAATGCTGGTTAAACCTTTATTTGCTTCTTTATCAATTTCTAAAACATTTAATCAGAACAAAAGGACATTGTATGCTGAAAATTGTTGGCTCTTAAGGATCAACAACCTCACAGAAAAGAATGACAGGGGCTGTAAAGGTTTTCTTCATATGCTGTCTACTTCAAGGTAGCTTATGCCAACAGTGGGCAGCCTTGATGCCTCAGACAGTCGAGGGACTAAGTGGATCCTGTGTGATGGTCCCCTGCACGTTCAGCTTGCTCTCCGCCTGGGATAACCACCTGGATGATTCATGTAAAGCCATTTGGAAGAGAGGCTGGAGTCGAACGCAGGTGTTTGATTCCAGCCTCACTGGGGAACATGCAAGCTCAAACATCCTGCAAGGAAACCTAACGGGGATCCTGCGTGAGAAGGACTGCACCATCATTTTCAACAACCTGCCATCGGACCATTACGACAGCTATTACTTCAGACTGCAGTGTGACAATGATCTGAAGTTCAACTTTCCAACGGGCGTCCTTATCACCACTCGAAATTCCCTGCACAAACCCACCATAACTCCATCCAGGCTGGAGGTAGAAGAAGGGACTCCAGTGAGGTTGAACTGCACGGCAGTAGCTCCCTGTCCCATTCTCCCTCCAGCACTGACTTGGAAACCTAGTATTGGTGACATTGAGGAAAACATAGAAACTAAATTCATGACCTCTGTGTTAAACTTCACCGCTTCTTACCTCCACAACGGACAGAAGTTCTCGTGCGCCGCTCTCTACAACCGTCAAGCTGGCAACAGTGACCTTCTGTATGAAAAAAGTTTGACCCTCCGTGTTCTTTACCCTCCAAATAACACATCAGTCAGCTATTCTGGTCCTGTAAAAGAGGGTGGCTGGGTGACTCTGACCTGCAACGCCAATGCAAATCCAGCTGTGGACAGCTACACCTGGTACAAAGTGGATGGAGATCAGGTGACAGCAGTGGGTTCGAAAAACCGACTTTCGACTACGGTCTCAGAAGTGGACAGCAGATTTTACTGCAAAGTCAGTAACGGATATGGAACCCAGAACTCATCCATCACTCAGATAGACGTACAATTTCCTCCCAAGGAAACCACAGTAATCATCGACCCTAATGATCCAATACTGGAGGGCAGCTCTGTTTCTCTGCTCTGTAAGAGCCGTGCCAACCCACCTGTGACCAACTACACCTGGTACAAAGACGACAAAGAGGTTATGGAGCCTGGATCGAGCTTGGTTATGATCGGTGTAGACCCAAGCCACAGCGGTGACTACCACTGTTCAGCAAAAAGTGAGCTGGGAGAGGACGTTTCAGCGCAGATTCAGCTGGACATTCAGTATCCCCCTCAGAACACAACAGTGTCAGTTGACCCTTCTGGTCCGGTGCTGGATGGCAGCTCTGTCACTCTGACCTGCTCAAGCATCGCCAATCCAGCCGCAATAAACATCACCTGGATCAGAGTGGCTGGAGGACAAAAGGAGGTGATGGGCTCTGAGAAAGACTTCACCTTCAATGTGACCAAACTCTCAGAGGATCAGTATTACTGTGAAGCTCTGAATGTCCACGGAGCTGAATACTCAGAGCCTGCCAGTATTGATGTCACATTTGCTCCAGAGATCCTTCCTTCTTCCCGCTGCGTCAAGATTTTATCCCTGATCCGATGTTCCTGCGACAGCCAGGGGAACCCGCGTCCCTCCCTGGTTTGGGAATTGGCCGGGGAGCCTGTCAATCACTCTGCTGCCATCCCGATCAGGGAAGTTCCCCTGGGGAGCGTGAGCATGAGGAGCCTCATCACCCTGTACCATTTGGATGATGACATGCCCTCTGTAGTCTGCCTCAGCATCAACTCGCTGGGCTCTGATAGTTTTGCATTCAACGTGTCCTCAAGTGAAACTCAGCTAGGCCTCCACACTTTTTCTCTTTTGATTGGCTCTGCAGTAGGCGCACTGGGGATGCTGCTGGTATGTGTCCcgctgctgcttttgttttgcaGGAAAAGGAAAGGCAGTCTTACACCCAACAAGGGATTGGTGGACTCTTCTGACTTTTTAGCTACTAATGGGACTCACTCTTCCAAAGTGGATGTGATTTACGCCAATAAAACCATTAtggaagaggaaggagaagtTAAGGAAGACTCTCTTAACTACGCCAATGTGGACTTTGCTAAACTCCAGGCCAAATCAGAGGGTACGCTTGTTGAAGGGGAGATCAGAGGCCTGGACTCCAAGACGACTGAGTATACTGAGATCTGTCTGCACTCCAGAGAAGGCAATGGAGAGGACGTGAAGGAAGAAGAGACAGTTGCTGACACTCATGGTCTCATAGGACAATGAAAAGTTTATGGCTCAACTTTGGAGGAAATTAAACAGGATTCTGGGCTTCAAACGGCTACAGGACTTTACCATATCCAACTTCAGTTTTCCACACTCAGCTGAGCTAAAAAAATTCTGCAGCACATTTGTCAATGTAACATGTTCTTGTGTGTCTTTACTGAAAagtgcatataaaaaaaaattacaataaaaatgattttgaaTACATATACTAGGTACTTCACCACAATAGACCATAACAGTAAACATTCCCTTTAAACTGATGAACTTTTTTATAGATGAATGCTGTCGCACTTACATTTAATATTTCAATGCAACGTTTGTCTTACACTTttgttaattttattgtttgaaACCTTTGTTCATAGGGAAATAAACAGTTACAGTTTGtcacaca

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806280.1 True 2818 mRNA 0.47 12 28472676 28482599

Neighbor

gene id symbol gene type direction distance location
phldb3 phldb3 coding upstream 1596 28441151 ~ 28471080 (+)
ethe1 ethe1,LOC102793944 coding upstream 35742 28432322 ~ 28436934 (+)
LOC120561728 LOC104950326 coding upstream 41248 28419841 ~ 28431428 (+)
xrcc1 xrcc1,LOC102793167 coding upstream 93533 28354424 ~ 28379143 (+)
LOC120562954 LOC103375369 coding upstream 118514 28347610 ~ 28354162 (+)
zmp:0000000881 NA coding downstream 167694 28650293 ~ 28657142 (+)
LOC120561727 NA coding downstream 217301 28699900 ~ 28705326 (+)
scn1ba LOC104930292 coding downstream 228038 28710637 ~ 28728274 (+)
si:ch211-225p5.8 NA coding downstream 284396 28766995 ~ 28773597 (+)
LOC120562348 LOC104949128 coding downstream 293032 28775631 ~ 28776059 (+)
LOC120563095 NA non-coding upstream 34316 28437215 ~ 28438360 (+)
LOC120562953 NA non-coding upstream 125884 28331919 ~ 28346792 (+)
G76608 NA non-coding upstream 180116 28292000 ~ 28292560 (+)
G76579 NA non-coding upstream 236337 28233612 ~ 28236339 (+)
G76510 NA non-coding upstream 534014 27934795 ~ 27938662 (+)
G76705 NA non-coding downstream 51444 28534043 ~ 28534766 (+)
G76709 NA non-coding downstream 59999 28542598 ~ 28542841 (+)
G76710 NA non-coding downstream 62206 28544805 ~ 28545095 (+)
G76712 NA non-coding downstream 67509 28550108 ~ 28550378 (+)
G76717 NA non-coding downstream 78945 28561544 ~ 28572251 (+)
LOC120562434 NA other upstream 55921 28414518 ~ 28416755 (+)
drd2l LOC108240316,LOC107379306,LOC103372392 other upstream 57023 28388097 ~ 28415653 (+)
lim2.5 lim2,LOC106582670,LOC106605161,LOC107379310,LOC100699404,LOC102215845,LOC103139272 other upstream 184899 28283276 ~ 28287777 (+)
G76581 LOC101157563,LOC103369309 other upstream 227515 28241783 ~ 28245161 (+)
LOC120561771 LOC103367052,LOC101466533,LOC107379323,LOC100706402,LOC103139281 other upstream 445150 27984053 ~ 28027526 (+)
G76707 NA other downstream 38100 28520699 ~ 28521622 (+)
G76714 NA other downstream 70973 28553572 ~ 28569866 (+)
LOC120562342 NA other downstream 318051 28800650 ~ 28835368 (+)
pear1 LOC104932170 other downstream 697231 29179830 ~ 29244092 (+)
mex3a mex3a other downstream 793548 29276147 ~ 29288548 (+)

Expression


Co-expression Network