LOC120562586 (LOC104935658,LOC103355652,LOC101471248)


Basic Information

Item Value
gene id LOC120562586
gene name LOC104935658,LOC103355652,LOC101471248
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 10328164 ~ 10357777 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806375.1
AAAAGCAAACCCTTCAGTTGCCCTGATGAAAGTCTGAGGTAGGCCTAAATTGTATTACACTGTAATAGATACAACATCAAAACTCTGTGAGATACCATGTTTTCACAATGTCAGACGAAAATCAGAGAGATTCAGAAGaggatgacgatgatgatgacagCGAGAGTGGATCAAGCAGAGGCCAAAATGGTTCATTTTTCACCAATGTATTCAATAGTTTGATTTCAGGGTTTCTTCGAAACTGGGGCTGCCTCCGAAGCGTTCCCAACATGTTGAACGTTCCCAGCCAGTCGTTCCCTGCGCCGTGTTCCCAGCAGCGGGTCGCTCCGTCCGGCCAGTCCGGAAGGAACAAGGTGGCGTTGAAGCCTGGCCACAGTTTAATGGACTGGATTCGATTTTCCAAGAGTGGAAAAGATCTGACAGGGCTCAGAGGGCGCCTGATTGAAGTTACCCAGGAAGAGCTGCAGAAACACAACACAAGGGAGGACTGCTGGACCTGCATACGAGGTATGGTTTACAACGTGACCCCCTACATGGACTACCACCCTGGTGGGGAAGCTGAGCTGATGAAGGCCGCTGGGATAGATGGCACTGAGCTGTTTGACCAGGTCCATCGTTGGGTGAACTATGAGTCCATGTTAAAAGAGTGCCTGGTGGGCAGGATGGCCACCAAGGTCCCCACAGCCAataaagCTATCACTCCTCCTACGCCACCGACTGGCCTCGCCCCACCTATGTCAGTGGCTCCTCCCCAAGACAAAGACTCCCGGCCTCGGTATGACTGGTTCCAAACTGATGTGACTGTTCATCTGGTCCTTTATGCTAAACGGAAGatcCCCAGCTCGGGCTGCACCACTGTTGATCTTGAGGCCGGGGTTCTACGGCTGGAAGTGCTGCTGGGGCAAATGTCCTACATGATACATTTACGTCTTGCTGATGAAGTTGAAGGAACTGTTGCTGTCCACACTGCCTTTTCAGTGGGAAAGATCCAGATCAGCATACGCAAACAGGCTAAAGAAAAATGGACAAGACTTGGTCAACCACTGGAATTTCACAATACATTTCTACGAAAAAAAGACAGAGCTCTCTATTATCGGGATTGTGTGTTGGTGTCTAAGACTCAGGTGAACCATAACACCCACGTGTTCAGATTGCAATTCCCACGTGGGACTGTCATGCATGTGCCTGTTGGAAAACACGTCTACCTCAAAGCCCTCATTCAAGACACAGAGGTAGTGAGGCCGTATACCCCAGTAGATCAGAACCTGGAAGCAGCCTCCCTCCGCTCCTCGCAGGAATCCGACCTCTACCTCATGATCAAAGTTTACCCTGATGGAGTGTTCACCCCACATCTCAACAGCCTGTGCATCGGTGACTGTATATCCATTAGTGGTCCAGAGGGTACCTTCAGTCTCCGCCCCCTTCGTGATGTCACATACCTCTACCTAATAGCAGCAGGCACGGGGTTCACGCCCATGGCTCGCCTCATCCAACTGGCCCTACAGGACATTGACACCATCAGAAAAACCAAGCTGCTCTTTTTGAACCGGCGAGAGGAGGACATCCTGTGGCGCTGTGAACTGGATGAACTGGCTGCTAATACGGACAGgtttCAGGTGGAGTACGTCGTCTCCGATCCCTGTGAAAGCTGGACTGGCAGGACGGGGCGGGTGGATGAGTCCATGCTCAAGGATTTCCTCAACAGGCCCGACGGGTCCAAacgctatgtgtgtgtgtgcggcccCGATGCCTTTACAGAGCTAACAATAGGGTTTTTGAAGCAGCAGGGCTTCAGTGAAGAGGAGCTCCACGCCTTCCAGGGCTGATGAGCTCTGCCTCGACCCCACCCTTCAAAGACTGTGTGCCTGCGAGCGAGAGAGCGACACAGAGAGtccattttaatttataaagcaGTGTTTGTGGGAGATAAATGGAACGTTGTATTTCTATGCACCAAGGGCGCTGAAGATGCCGACAGCAGGCAACACGACCCAGGCTTTGATGGGCTGTAAAGACAATCCCAAAAATCACAGTTCAGTAAGATTTGTATGATTCTGGCTCGTTTTGGTCCGTGTCTGGAATAAAGTTAATAATGTTCATAAAACTATAAGTTGAAACATTGAAAAGGTGTGTAAAATAAAAGCAGTAAAATATACTGAGACACAGAGAAAATCATGAGATGATGTAAACTGATGGATTATATGcaatataaaaacagaattaaCATGAGCTTTGGTGTGTGAAGCAGAGGATCTTCTGGAGATATTTATGGATATTAAAGTTCCAGTTACATGGATGGATGATTTTGCAGGAGTTATAACCATTGAAACCagtgaaataaaatgcattatggTAACATTT
>XM_039806376.1
TCAGAGAGATTCAGAAGaggatgacgatgatgatgacagCGAGAGTGGATCAAGCAGAGGCCAAAATGGTTCATTTTTCACCAATGTATTCAATAGTTTGATTTCAGGTGGCGTTGAAGCCTGGCCACAGTTTAATGGACTGGATTCGATTTTCCAAGAGTGGAAAAGATCTGACAGGGCTCAGAGGGCGCCTGATTGAAGTTACCCAGGAAGAGCTGCAGAAACACAACACAAGGGAGGACTGCTGGACCTGCATACGAGGTATGGTTTACAACGTGACCCCCTACATGGACTACCACCCTGGTGGGGAAGCTGAGCTGATGAAGGCCGCTGGGATAGATGGCACTGAGCTGTTTGACCAGGTCCATCGTTGGGTGAACTATGAGTCCATGTTAAAAGAGTGCCTGGTGGGCAGGATGGCCACCAAGGTCCCCACAGCCAataaagCTATCACTCCTCCTACGCCACCGACTGGCCTCGCCCCACCTATGTCAGTGGCTCCTCCCCAAGACAAAGACTCCCGGCCTCGGTATGACTGGTTCCAAACTGATGTGACTGTTCATCTGGTCCTTTATGCTAAACGGAAGatcCCCAGCTCGGGCTGCACCACTGTTGATCTTGAGGCCGGGGTTCTACGGCTGGAAGTGCTGCTGGGGCAAATGTCCTACATGATACATTTACGTCTTGCTGATGAAGTTGAAGGAACTGTTGCTGTCCACACTGCCTTTTCAGTGGGAAAGATCCAGATCAGCATACGCAAACAGGCTAAAGAAAAATGGACAAGACTTGGTCAACCACTGGAATTTCACAATACATTTCTACGAAAAAAAGACAGAGCTCTCTATTATCGGGATTGTGTGTTGGTGTCTAAGACTCAGGTGAACCATAACACCCACGTGTTCAGATTGCAATTCCCACGTGGGACTGTCATGCATGTGCCTGTTGGAAAACACGTCTACCTCAAAGCCCTCATTCAAGACACAGAGGTAGTGAGGCCGTATACCCCAGTAGATCAGAACCTGGAAGCAGCCTCCCTCCGCTCCTCGCAGGAATCCGACCTCTACCTCATGATCAAAGTTTACCCTGATGGAGTGTTCACCCCACATCTCAACAGCCTGTGCATCGGTGACTGTATATCCATTAGTGGTCCAGAGGGTACCTTCAGTCTCCGCCCCCTTCGTGATGTCACATACCTCTACCTAATAGCAGCAGGCACGGGGTTCACGCCCATGGCTCGCCTCATCCAACTGGCCCTACAGGACATTGACACCATCAGAAAAACCAAGCTGCTCTTTTTGAACCGGCGAGAGGAGGACATCCTGTGGCGCTGTGAACTGGATGAACTGGCTGCTAATACGGACAGgtttCAGGTGGAGTACGTCGTCTCCGATCCCTGTGAAAGCTGGACTGGCAGGACGGGGCGGGTGGATGAGTCCATGCTCAAGGATTTCCTCAACAGGCCCGACGGGTCCAAacgctatgtgtgtgtgtgcggcccCGATGCCTTTACAGAGCTAACAATAGGGTTTTTGAAGCAGCAGGGCTTCAGTGAAGAGGAGCTCCACGCCTTCCAGGGCTGATGAGCTCTGCCTCGACCCCACCCTTCAAAGACTGTGTGCCTGCGAGCGAGAGAGCGACACAGAGAGtccattttaatttataaagcaGTGTTTGTGGGAGATAAATGGAACGTTGTATTTCTATGCACCAAGGGCGCTGAAGATGCCGACAGCAGGCAACACGACCCAGGCTTTGATGGGCTGTAAAGACAATCCCAAAAATCACAGTTCAGTAAGATTTGTATGATTCTGGCTCGTTTTGGTCCGTGTCTGGAATAAAGTTAATAATGTTCATAAAACTATAAGTTGAAACATTGAAAAGGTGTGTAAAATAAAAGCAGTAAAATATACTGAGACACAGAGAAAATCATGAGATGATGTAAACTGATGGATTATATGcaatataaaaacagaattaaCATGAGCTTTGGTGTGTGAAGCAGAGGATCTTCTGGAGATATTTATGGATATTAAAGTTCCAGTTACATGGATGGATGATTTTGCAGGAGTTATAACCATTGAAACCagtgaaataaaatgcattatggTAACATTT

Function

NR:

description
PREDICTED: cytochrome b5 reductase 4 isoform X1

GO: NA

KEGG:

id description
K00326 E1.6.2.2; cytochrome-b5 reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806375.1 True 2361 mRNA 0.48 16 10328164 10357777
XM_039806376.1 False 2115 mRNA 0.48 15 10328285 10357777

Neighbor

gene id symbol gene type direction distance location
sim1a sim1,LOC103355653,LOC103388874,LOC102313558 coding upstream 87088 10215493 ~ 10241076 (+)
ascc3 ascc3 coding upstream 127759 10007275 ~ 10200405 (+)
hace1 hace1 coding upstream 1138075 9147615 ~ 9190089 (+)
bves bves coding upstream 1183410 9127850 ~ 9144754 (+)
popdc3 popdc3 coding upstream 1205077 9115711 ~ 9123087 (+)
LOC120562578 NA coding downstream 11088 10368865 ~ 10378754 (+)
LOC120561655 tmem74,LOC103359617 coding downstream 159080 10516857 ~ 10518991 (+)
eif3ea eif3e,LOC101480544,LOC102302331,LOC100691937 coding downstream 263415 10621192 ~ 10656796 (+)
rspo2 rspo2 coding downstream 304701 10662478 ~ 10729121 (+)
macf1b LOC102795676,LOC102290681,LOC101484559,LOC100704065,LOC104943360 coding downstream 604113 10961890 ~ 11002470 (+)
G71609 NA non-coding upstream 125573 10201676 ~ 10202591 (+)
G71607 NA non-coding upstream 324471 10003481 ~ 10003693 (+)
G71591 NA non-coding upstream 498857 9828594 ~ 9829307 (+)
G71562 NA non-coding upstream 872523 9455375 ~ 9455641 (+)
G71557 NA non-coding upstream 956216 9371004 ~ 9371948 (+)
G71723 emc2 non-coding downstream 222383 10580160 ~ 10591406 (+)
G71738 NA non-coding downstream 260480 10618257 ~ 10618575 (+)
G71741 NA non-coding downstream 386234 10744011 ~ 10744271 (+)
LOC120562885 NA non-coding downstream 390346 10748123 ~ 10752652 (+)
G71826 NA non-coding downstream 762142 11119919 ~ 11120208 (+)
G71610 NA other upstream 119967 10207415 ~ 10208197 (+)
trnay-gua_42 NA other upstream 1478444 8849632 ~ 8849720 (+)
trnay-gua_41 NA other upstream 1478827 8849249 ~ 8849337 (+)
trnay-gua_40 NA other upstream 1479593 8848483 ~ 8848571 (+)
trnay-gua_39 NA other upstream 1480683 8847392 ~ 8847481 (+)
LOC120561920 LOC106676202,LOC102303534 other downstream 388231 10746008 ~ 10751849 (+)
LOC120562569 LOC104943359,LOC103359623,LOC101482188,LOC107100615,LOC106961743 other downstream 427877 10785654 ~ 10961130 (+)
G71743 NA other downstream 462518 10820295 ~ 10821500 (+)
depdc1b depdc1b,LOC103388656,LOC101486657 other downstream 1109568 11467345 ~ 11482423 (+)
mbpb mbp,LOC104918400 other downstream 1179407 11537184 ~ 11599226 (+)

Expression


Co-expression Network